Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07831
- Subject:
- XM_006519628.2
- Aligned Length:
- 2304
- Identities:
- 1423
- Gaps:
- 741
Alignment
Query 1 ATGTTTCGCGACCAGGTCGGGGTGCTGGCGGGCTGGTTTAAGGGCTGGAACGAGTGCGAGCAGACTGTTGCGCT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GCTGTCGCTGCTCAAGCGCGTGAGCCAGACCCAGGCCCGCTTCCTCCAGCTCTGCCTGGAGCACTCGCTGGCCG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ACTGCGCCGAGCTGCACGTCCTCGAACGCGAGGCCAACAGCCCCGGAATCATTAACCAATGGCAACAGGAATCC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AAGGATAAAGTGATTTCCCTCCTGTTAACTCATCTGCCTTTGTTGAAGCCAGGAAACCTCGACGCGAAAGTAGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 ATATATGAAACTGCTGCCCAAAATCCTGGCTCACTCTATTGAACACAACCAGCACATTGAGGAGAGCAGGCAGC 370
|||||||||||||||||.||||||||.||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1 ----ATGAAACTGCTGCCCAAGATCCTGGCACACTCTATCGAACACAACCAGCACATTGAGGAGAGCAGGCAGC 70
Query 371 TGCTGTCCTATGCTTTGATACATCCAGCCACTTCGTTAGAAGACCGTAGTGCTTTAGCCATGTGGCTGAATCAC 444
|||||||||||||||||||.||.|||||||||||.||.||||||||.||.||..||||||||||||||||||||
Sbjct 71 TGCTGTCCTATGCTTTGATCCACCCAGCCACTTCCTTGGAAGACCGCAGCGCACTAGCCATGTGGCTGAATCAC 144
Query 445 TTGGAGGACCGCACGTCGACCAGCTTTGGTGGCCAGAACCGAGGCCGCTCAGACTCTGTGGATTATGGACAGAC 518
||||||||||||||.||.||||||||||||.|||||||||||||||||||.|||||||||||||||||||||||
Sbjct 145 TTGGAGGACCGCACATCCACCAGCTTTGGTAGCCAGAACCGAGGCCGCTCGGACTCTGTGGATTATGGACAGAC 218
Query 519 ACACTACTATCACCAAAGACAGAACTCTGATGACAAGCTCAATGGGTGGCAGAACTCTCGGGATTCTGGGATTT 592
.||.||||||||||||||||||||||||||.||.|||||||||||.||||||||||||||||||||||||||||
Sbjct 219 GCATTACTATCACCAAAGACAGAACTCTGACGATAAGCTCAATGGCTGGCAGAACTCTCGGGATTCTGGGATTT 292
Query 593 GCATCAATGCCTCCAACTGGCAGGACAAAAGCATGGGGTGTGAGAATGGCCATGTGCCCCTCTACTCCTCCTCA 666
||||||.|||||||||||||||||||||.|||.||||.|||||||||||||||||||||||||||||.|||||.
Sbjct 293 GCATCAGTGCCTCCAACTGGCAGGACAAGAGCCTGGGCTGTGAGAATGGCCATGTGCCCCTCTACTCTTCCTCG 366
Query 667 TCTGTCCCCACCACAATCAATACGATTGGAACC------AGCACAAGTAC------------------------ 710
||||||||..||||||||||.|||||||||||| |||||.|||||
Sbjct 367 TCTGTCCCTGCCACAATCAACACGATTGGAACCGGCGCAAGCACGAGTACCACAGGTCCCACCTCCTCTGGTCA 440
Query 711 -------------------------------------------------------------------------- 710
Sbjct 441 ATCCCTTTTTGGCAAGTCCTATTCTGTGGTTTCAAACTCACTTGAATTCCAGCTGTGCAGAGGGAGCCCCATCT 514
Query 711 -------------------------------------------------------------------------- 710
Sbjct 515 GGAAATGTGGCCATACCTGGCCAGCACCATTTGAAGTCCCCACCAGAGTTCTCTCAGGCCAGGCACACCACAGC 588
Query 711 -------------------------------------------------------------------------- 710
Sbjct 589 CCTTTGAAACGATCTGTGTCCCTTACCCCACCCATGAATGTGCCAAACCAGCCTCTAGGACATGGATGGATGTC 662
Query 711 -------------------------------------------------------------------------- 710
Sbjct 663 TCATGAGGACTTACGAGCTAGAGGACCTCAGTGCCTCCCATCCGATCATGCCCCCCTGTCTCCACAAAGCAGTG 736
Query 711 -------------------------------------------------------------------------- 710
Sbjct 737 TAGCCTCTTCAGGAAGTGGTGGGAGTGAACACTTAGAAGATCAGACCACTGCTCGTAACACATTCCAAGAAGAA 810
Query 711 --------------AAATGTTCCAGCCTGGCTGAAAAGCCTCCGCCTGCACAAATATGCCGCGCTTTTCTCCCA 770
|.||||||||||.|||.|.||||||||||||||||||||.||.||.|||||.|||||.||
Sbjct 811 GGTAGTGGTATGAAAGATGTTCCAGCTTGGTTAAAAAGCCTCCGCCTGCACAAGTACGCTGCGCTCTTCTCGCA 884
Query 771 GATGACCTATGAGGAGATGATGGCCCTCACCGAGTGCCAGCTGGAGGCGCAGAATGTTACCAAAGGTGCAAGAC 844
||||||.||||||||.||||||||||||||.|||||.||.||||||||.|||||||||||||||||.|||||||
Sbjct 885 GATGACTTATGAGGAAATGATGGCCCTCACTGAGTGTCAACTGGAGGCTCAGAATGTTACCAAAGGCGCAAGAC 958
Query 845 ACAAAATTGTCATCAGTATTCAGAAGCTCAAAGAAAGACAAAATCTCCTGAAGTCTTTGGAAAGGGACATCATC 918
||||||||||.|||||||||||||||||||||||||||||.||.||||||||||||||||||||||||||||||
Sbjct 959 ACAAAATTGTAATCAGTATTCAGAAGCTCAAAGAAAGACAGAACCTCCTGAAGTCTTTGGAAAGGGACATCATC 1032
Query 919 GAGGGGGGCAGCCTGCGCATCCCGCTCCAGGAACTGCACCAGATGATCCTGACTCCGATCAAGGCCTACAGCTC 992
||.||||||||||||||||.|||.||||||||.||.||.||||||||||||||.||.|||||||||||||||||
Sbjct 1033 GAAGGGGGCAGCCTGCGCACCCCCCTCCAGGAGCTACATCAGATGATCCTGACACCCATCAAGGCCTACAGCTC 1106
Query 993 CCCGAGCACCACCCCCGAGGCTCGCCGCCGGGAGCCCCAGGCCCCGCGTCAGCCCTCACTGATGGGCCCCGAGA 1066
.||.||.||||||||.||||..|||.|||||| |||||||||||||| ||||
Sbjct 1107 TCCCAGTACCACCCCTGAGGTGCGCTGCCGGG------------------AGCCCTCACTGATG------GAGA 1156
Query 1067 GCCAGAGCCCCGACTGCAAAGATGGGGCCGCAGC---CACTGGCGCCACGGCCACCCCCTCGGCCGGGGCCAGC 1137
|||..|||||.|||||||||||..|.||.||||| |||..|||||||.||||...||||.|||||.||||||
Sbjct 1157 GCCCAAGCCCTGACTGCAAAGACAGCGCTGCAGCAGTCACCAGCGCCACAGCCAGTGCCTCAGCCGGTGCCAGC 1230
Query 1138 GGGGGGCTCCAGCCGCACCAGCTGAGCAGCTGCGATGGGGAGCTGGCCGTCGCCCCCCTGCCAGAGGGGGACCT 1211
||.||.||.||.||.|.||||||||||||||||||.||.||||||||.||||||||.|||||.|||||||||||
Sbjct 1231 GGTGGACTGCAACCACCCCAGCTGAGCAGCTGCGACGGAGAGCTGGCTGTCGCCCCTCTGCCGGAGGGGGACCT 1304
Query 1212 CCCCGGGCAGTTCACACGCGTCATGGGGAAAGTGTGCACACAGCTCTTGGTCTCCAGACCTGATGAGGAAAATA 1285
|||.|||||||||||.||.|||||||||||||||||||||||||||||||||||||||||.|||||.|||||||
Sbjct 1305 CCCGGGGCAGTTCACCCGAGTCATGGGGAAAGTGTGCACACAGCTCTTGGTCTCCAGACCCGATGAAGAAAATA 1378
Query 1286 TAAGTTCCTATTTACAGCTCATAGACAAGTGTCTAATTCATGAGGCATTTACAGAGACACAGAAAAAAAGATTG 1359
||||.||||||.||||||||.|||||||||||||..||||||||||||||||||||||||||||||||||||||
Sbjct 1379 TAAGCTCCTATCTACAGCTCTTAGACAAGTGTCTTGTTCATGAGGCATTTACAGAGACACAGAAAAAAAGATTG 1452
Query 1360 TTGTCATGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTTCCCTCGGAAAACCCTTCTAGACATATCAGGATA 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1453 TTGTCATGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTTCCCTCGGAAAACCCTTCTAGACATATCAGGATA 1526
Query 1434 TCGACAGCAAAGAAATCGAGGCTTTGGGCAATCCAACTCCCTCCCGACGGCTGGCTCTGTGGGCGGTGGCATGG 1507
||||||||||||||||||.|||||||||||.||||||||||||||.||.||..|||||||||||.|.|||||||
Sbjct 1527 TCGACAGCAAAGAAATCGTGGCTTTGGGCAGTCCAACTCCCTCCCAACAGCCAGCTCTGTGGGCAGCGGCATGG 1600
Query 1508 GCAGACGGAACCCGCGCCAGTACCAGATCCCCTCTCGGAACGTCCCTTCCGCCCGCCTGGGCCTCTTGGGCACC 1581
|||||||||||||.||.||||||||||||.|.||||||||.|||||||||||||||||.||.|||.||||||||
Sbjct 1601 GCAGACGGAACCCACGACAGTACCAGATCGCATCTCGGAATGTCCCTTCCGCCCGCCTTGGTCTCCTGGGCACC 1674
Query 1582 AGTGGATTCGTCAGCTCCAACCAGCGCAACACCACAGCTACCCCCACCATCATGAAACAAGGAAGACAGAACCT 1655
||||||||.||||||||||||||||||.|||||.|.||.|.|||||||||||||||||||||||||||||||||
Sbjct 1675 AGTGGATTTGTCAGCTCCAACCAGCGCCACACCGCTGCCAACCCCACCATCATGAAACAAGGAAGACAGAACCT 1748
Query 1656 GTGGTTTGCCAACCCCGGGGGCAGCAATAGCATGCCAAGCCGCACCCACAGCTCAGTCCAGAGGACCCGCTCGC 1729
.||||||||||||||.|||||||||||.||||||||.|||||||||||||||||.|||||||.|||||||||||
Sbjct 1749 CTGGTTTGCCAACCCTGGGGGCAGCAACAGCATGCCCAGCCGCACCCACAGCTCCGTCCAGAAGACCCGCTCGC 1822
Query 1730 TGCCCGTGCACACTTCCCCACAGAACATGCTGATGTTCCAGCAGCCAGAATTCCAGCTTCCCGTGACCGAACCT 1803
||||||||||.|||||||||||.||||||||||||||||||||.||||||||.||||||||.|||||.||||||
Sbjct 1823 TGCCCGTGCATACTTCCCCACAAAACATGCTGATGTTCCAGCAACCAGAATTTCAGCTTCCTGTGACTGAACCT 1896
Query 1804 GACATCAACAACAGGCTGGAGTCGTTGTGCCTCAGTATGACCGAACACGCCCTGGGAGACGGGGTTGACCGGAC 1877
|||||||||||.|||||||||||.|||||||||||||||||.||.||.||||||||||||||||||||||||||
Sbjct 1897 GACATCAACAATAGGCTGGAGTCCTTGTGCCTCAGTATGACGGAGCATGCCCTGGGAGACGGGGTTGACCGGAC 1970
Query 1878 CTCCACCATC 1887
||||||.|||
Sbjct 1971 CTCCACAATC 1980
