Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07865
- Subject:
- XM_017010595.1
- Aligned Length:
- 5369
- Identities:
- 1272
- Gaps:
- 4078
Alignment
Query 1 ----------------ATGGCGTCGGAGCTAGAGCCAGA---------GGT-------------GCAGGCC--- 33
||.||| ||.|..||.|||.|| ||| |||||||
Sbjct 1 ATGTTCGGCCGAGGAGATTGCG--GGGGTGAGTGCCGGAACCCGGGCGGGTGCGTCTGCCCCTCGCAGGCCGCG 72
Query 34 -------------ATCGA------------CCGGAG--------------CTTGCTGGAA-----TGT-TCGGC 62
|.||| |.|||| |||| .|||| ||| .||||
Sbjct 73 CCTGTGGGGAGGAACCGACTCCTGGACGTCCTGGAGCAGCCCGACCCAGACTTG-GGGAAACAGCTGTGCCGGC 145
Query 63 CGAGGAGATTGC----GGGGAAATGGCTGCAAGCAACTGACCTCACTAGAGAAGTGTACCAGCATTTAGCCCAC 132
| .|.|| .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 146 C------CTCGCCTTGTGGGAAATGGCTGCAAGCAACTGACCTCACTAGAGAAGTGTACCAGCATTTAGCCCAC 213
Query 133 TATGTACCCAAAATCTACTGCAGGGGTCCCAACCCTTTTCCACAGAAAGAAGACATGCTGGCACAGCATGTTTT 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 214 TATGTACCCAAAATCTACTGCAGGGGTCCCAACCCTTTTCCACAGAAAGAAGACATGCTGGCACAGCATGTTTT 287
Query 207 GTTGGGACCAATGGAATGGTACCTTTGTGGTGAAGATCCTGCATTTGGATTTCCAAAACTTGAGCAAGCAAACA 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 288 GTTGGGACCAATGGAATGGTACCTTTGTGGTGAAGATCCTGCATTTGGATTTCCAAAACTTGAGCAAGCAAACA 361
Query 281 AACCTTCTCATCTTTGTGGTCGTGTTTTTAAAGTAGGAGAGCCTACATATTCTTGCAGAGACTGTGCAGTTGAT 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 362 AACCTTCTCATCTTTGTGGTCGTGTTTTTAAAGTAGGAGAGCCTACATATTCTTGCAGAGACTGTGCAGTTGAT 435
Query 355 CCAACTTGTGTTTTGTGCATGGAGTGCTTTTTGGGAAGTATTCACAGAGATCATCGATATAGGATGACAACATC 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 436 CCAACTTGTGTTTTGTGCATGGAGTGCTTTTTGGGAAGTATTCACAGAGATCATCGATATAGGATGACAACATC 509
Query 429 AGGAGGTGGAGGTTTCTGTGACTGTGGTGATACTGAAGCCTGGAAAGAGGGTCCTTACTGTCAAAAACATGAAC 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 510 AGGAGGTGGAGGTTTCTGTGACTGTGGTGATACTGAAGCCTGGAAAGAGGGTCCTTACTGTCAAAAACATGAAC 583
Query 503 TTAACACCTCTGAAATTGAGGAAGAAGAGGATCCTCTTGTTCATTTATCAGAAGATGTGATAGCAAGAACTTAT 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 584 TTAACACCTCTGAAATTGAGGAAGAAGAGGATCCTCTTGTTCATTTATCAGAAGATGTGATAGCAAGAACTTAT 657
Query 577 AACATTTTTGCTATTACGTTTCGGTATGCAGTAGAAATATTAACCTGGGAAAAAGAAAGTGAATTGCCAGCAGA 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 AACATTTTTGCTATTACGTTTCGGTATGCAGTAGAAATATTAACCTGGGAAAAAGAAAGTGAATTGCCAGCAGA 731
Query 651 TTTAGAGATGGTAGAGAAGAGTGACACCTACTATTGCATGCTGTTTAATGATGAGGTTCACACCTACGAACAAG 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 732 TTTAGAGATGGTAGAGAAGAGTGACACCTACTATTGCATGCTGTTTAATGATGAGGTTCACACCTATGAACAAG 805
Query 725 TTATTTATACTCTTCAGAAAGCTGTTAACTGTACACAAAAAGAAGCTATTGGTTTTGCAACTACAGTAGATCGA 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 806 TTATTTATACTCTTCAGAAAGCTGTTAACTGTACACAAAAAGAAGCTATTGGTTTTGCAACTACAGTAGATCGA 879
Query 799 GATGGGCGTAGGTCTGTTCGATATGGAGATTTTCAGTATTGTGAGCAAGCAAAATCAGTAATTGTGAGAAATAC 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 880 GATGGGCGTAGGTCTGTTCGATATGGAGATTTTCAGTATTGTGAGCAAGCAAAATCAGTAATTGTGAGAAATAC 953
Query 873 CAGTAGACAGACAAAGCCACTCAAAGTTCAAGTTATGCATTCGTCTATTGTCGCACATCAGAATTTTGGTTTGA 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 954 CAGTAGACAGACAAAGCCACTCAAAGTTCAAGTTATGCATTCGTCTATTGTCGCACATCAGAATTTTGGTTTGA 1027
Query 947 AACTTTTGTCTTGGCTGGGAAGTATTATTGGATATTCAGATGGCCTTCGCCGGATTTTATGTCAAGTTGGTTTA 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028 AACTTTTGTCTTGGCTGGGAAGTATTATTGGATATTCAGATGGCCTTCGCCGGATTTTATGTCAAGTTGGTTTA 1101
Query 1021 CAAGAAGGGCCAGATGGTGAAAACTCTTCTCTAGTGGACAGACTGATGCTTAGTGATTCCAAATTATGGAAAGG 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102 CAAGAAGGGCCAGATGGTGAAAACTCTTCTCTAGTGGACAGACTGATGCTTAGTGATTCCAAATTATGGAAAGG 1175
Query 1095 TGCTAGGAGTGTATATCATCAGTTGTTCATGAGCAGTCTGCTTATGGATTTGAAATACAAGAAACTATTTGCTG 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1176 TGCTAGGAGTGTATATCATCAGTTGTTCATGAGCAGTCTGCTTATGGATTTGAAATACAAGAAACTATTTGCTG 1249
Query 1169 TTCGATTTGCAAAAAACTATGAGCGTTTGCAGAGTGATTATGTGACAGATGACCACGACAGAGAGTTTTCAGTC 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250 TTCGATTTGCAAAAAACTATGAGCGTTTGCAGAGTGATTATGTGACAGATGACCACGACAGAGAGTTTTCAGTC 1323
Query 1243 GCAGACCTCTCGGTTCAGATATTCACGGTTCCTTCACTTTTCTCTATCTCTGCTGGGCGCAGTGGCTCACCTCT 1316
|||||||||||||||||||||||||||||||||||||| |||| ||.| .|||||.|.|.
Sbjct 1324 GCAGACCTCTCGGTTCAGATATTCACGGTTCCTTCACT------------TGCT---CGAA--TGCTCATCACA 1380
Query 1317 G------------------------------------------------------------------------- 1317
|
Sbjct 1381 GAAGAAAACTTAATGAGCATTATCATTAAGACTTTTATGGATCATTTGAGACATCGAGATGCCCAGGGCAGATT 1454
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1455 TCAGTTTGAACGATACACTGCTTTACAAGCCTTCAAATTTAGGAGAGTACAGAGCCTTATTTTAGATCTCAAGT 1528
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1529 ATGTGTTAATTAGCAAACCAACTGAATGGTCAGATGAGCTGAGGCAGAAGTTCCTAGAAGGGTTTGATGCCTTT 1602
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1603 TTGGAATTACTAAAATGTATGCAGGGAATGGATCCAATTACACGTCAAGTAGGACAACATATTGAAATGGAACC 1676
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1677 AGAGTGGGAAGCAGCCTTCACACTACAAATGAAATTAACACATGTCATTTCAATGATGCAGGACTGGTGTGCTT 1750
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1751 CAGATGAAAAAGTGTTAATCGAAGCTTACAAGAAATGTCTCGCTGTACTGATGCAGTGTCATGGTGGTTATACT 1824
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1825 GATGGTGAACAGCCAATCACACTAAGCATTTGTGGACATTCAGTGGAAACTATCAGATACTGTGTTTCCCAAGA 1898
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1899 AAAAGTTAGCATTCACCTCCCAGTTTCTCGCTTACTTGCAGGTTTACATGTATTATTAAGCAAAAGTGAAGTGG 1972
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1973 CATATAAATTTCCAGAGCTCCTACCTCTAAGTGAACTTAGCCCACCCATGTTGATAGAACACCCTCTTAGATGT 2046
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2047 CTTGTTCTGTGTGCCCAAGTACATGCCGGAATGTGGAGAAGAAATGGGTTCTCTCTAGTAAACCAGATTTATTA 2120
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2121 CTACCATAATGTGAAATGCAGACGTGAGATGTTTGACAAGGATGTAGTAATGCTTCAGACAGGTGTCTCCATGA 2194
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2195 TGGATCCAAATCATTTCCTGATGATCATGCTCAGCCGCTTTGAACTTTATCAGATTTTCAGTACTCCAGACTAT 2268
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2269 GGAAAAAGATTTAGTTCTGAGATTACCCATAAGGATGTTGTTCAGCAGAACAATACTCTAATAGAAGAAATGCT 2342
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2343 ATACCTCATTATAATGCTTGTTGGAGAGAGATTTAGTCCTGGAGTTGGACAGGTAAATGCTACAGATGAAATCA 2416
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2417 AGCGAGAGATTATCCATCAGTTGAGTATCAAGCCTATGGCTCATAGTGAATTGGTAAAGTCTTTACCTGAAGAT 2490
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2491 GAGAACAAGGAGACTGGCATGGAGAGTGTAATCGAAGCAGTTGCCCATTTCAAGAAACCTGGATTAACAGGACG 2564
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2565 AGGCATGTATGAACTGAAACCAGAATGTGCCAAAGAGTTCAACTTGTATTTCTATCACTTTTCAAGGGCAGAAC 2638
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2639 AGTCCAAGGCAGAAGAAGCGCAACGGAAATTGAAAAGACAAAATAGAGAAGATACAGCACTCCCACCTCCGGTG 2712
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2713 TTGCCTCCATTCTGCCCTCTGTTTGCAAGCCTGGTTAACATTTTGCAGTCAGATGTCATGTTGTGCATCATGGG 2786
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2787 AACAATTCTGCAATGGGCTGTGGAACATAATGGATATGCCTGGTCAGAGTCCATGCTGCAAAGGGTGTTACATT 2860
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2861 TAATTGGCATGGCACTACAAGAAGAAAAACAACATTTAGAGAATGTCACGGAAGAGCATGTAGTAACATTTACC 2934
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2935 TTCACTCAGAAGATATCAAAACCTGGTGAAGCGCCAAAAAATTCTCCTAGCATACTAGCTATGCTGGAAACACT 3008
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3009 ACAAAATGCTCCCTACCTAGAAGTCCACAAAGACATGATTCGGTGGATATTGAAGACTTTTAATGCTGTTAAAA 3082
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3083 AGATGAGGGAGAGTTCACCTACCAGTCCCGTGGCAGAGACAGAAGGAACCATAATGGAAGAGAGTTCAAGGGAC 3156
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3157 AAAGACAAAGCTGAGAGGAAGAGAAAAGCAGAGATTGCCAGACTGCGCAGAGAAAAGATCATGGCTCAGATGTC 3230
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3231 TGAAATGCAGCGGCATTTTATTGATGAAAACAAAGAACTCTTTCAGCAGACATTAGAACTGGATGCCTCAACCT 3304
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3305 CTGCTGTTCTTGATCATAGCCCTGTGGCTTCAGATATGACACTTACAGCACTGGGCCCCGCACAAACTCAGGTT 3378
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3379 CCTGAACAAAGACAATTCGTTACATGTATATTGTGTCAAGAGGAGCAAGAAGTTAAAGTGGAAAGCAGGGCAAT 3452
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3453 GGTCTTGGCAGCATTTGTTCAGAGATCAACTGTATTATCAAAAAACAGAAGTAAATTTATTCAAGATCCAGAAA 3526
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3527 AATATGATCCATTATTCATGCACCCTGATCTGTCTTGTGGAACACACACTAGTAGCTGTGGGCACATTATGCAT 3600
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3601 GCCCATTGTTGGCAAAGGTATTTTGATTCCGTTCAAGCTAAAGAACAGCGAAGGCAACAGAGATTACGCTTACA 3674
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3675 TACGAGCTATGATGTAGAAAACGGAGAATTCCTTTGCCCCCTTTGTGAATGCTTGAGTAATACTGTTATTCCTC 3748
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3749 TGCTGCTTCCTCCAAGAAATATTTTTAACAAGTTAAATTTTTCAGACCAACCAAATCTGACTCAGTGGATTAGA 3822
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3823 ACAATATCTCAGCAAATAAAAGCATTACAGTTTCTTAGGAAAGAAGAAAGTACTCCTAATAATGCCTCTACAAA 3896
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3897 GAATTCAGAAAATGTGGATGAATTACAGCTCCCTGAAGGGTTCAGGCCTGATTTTCGTCCTAAGATCCCTTATT 3970
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3971 CTGAGAGCATAAAAGAAATGCTAACGACATTTGGAACTGCTACCTACAAGGTGGGACTAAAGGTTCATCCCAAT 4044
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4045 GAAGAGGATCCTCGTGTTCCCATAATGTGTTGGGGTAGCTGCGCGTACACCATCCAAAGCATAGAAAGAATTTT 4118
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4119 GAGTGATGAAGATAAACCATTGTTTGGTCCTTTACCTTGCAGACTGGATGACTGTCTTAGGTCATTGACGAGAT 4192
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4193 TTGCCGCAGCACACTGGACAGTGGCATCAGTTTCAGTGGTGCAAGGACATTTTTGTAAACTTTTTGCATCACTG 4266
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4267 GTGCCTAATGACAGCCATGAGGAACTTCCATGCATATTAGATATTGACATGTTTCATTTATTGGTGGGCTTGGT 4340
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4341 GCTTGCATTTCCTGCGTTGCAGTGTCAGGATTTTTCAGGGATCAGCCTTGGCACTGGAGACCTTCACATTTTCC 4414
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4415 ATCTGGTTACTATGGCACACATCATACAGATCTTACTTACCTCATGTACAGAAGAGAATGGCATGGATCAAGAA 4488
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4489 AATCCCCCTTGTGAAGAAGAATCAGCAGTTCTTGCTTTGTATAAAACACTTCACCAGTATACGGGAAGTGCCTT 4562
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4563 GAAAGAAATACCATCCGGCTGGCATCTGTGGAGGAGTGTCAGAGCTGGAATCATGCCTTTCCTGAAGTGTTCTG 4636
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4637 CTTTATTTTTTCATTACTTAAATGGAGTTCCTTCCCCACCCGACATTCAAGTTCCTGGAACAAGCCATTTTGAA 4710
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4711 CATTTATGTAGCTATCTTTCCCTACCAAACAACCTCATTTGCCTTTTTCAAGAAAATAGTGAGATAATGAATTC 4784
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4785 ACTGATTGAAAGTTGGTGCCGTAACAGTGAAGTTAAAAGATATCTAGAAGGTGAAAGAGATGCTATAAGATATC 4858
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4859 CAAGAGAATCTAACAAATTAATAAACCTTCCAGAGGATTACAGCAGCCTCATTAATCAAGCATCCAATTTCTCG 4932
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4933 TGCCCGAAATCAGGTGGTGATAAGAGCAGAGCCCCAACTCTGTGCCTTGTGTGCGGATCTCTGCTGTGCTCCCA 5006
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5007 GAGTTACTGCTGCCAGACTGAACTGGAAGGGGAGGATGTAGGAGCCTGCACAGCTCACACCTACTCCTGTGGCT 5080
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5081 CTGGAGTGGGCATCTTCCTGAGAGTACGGGAATGTCAGGTGCTATTTTTAGCTGGCAAAACCAAAGGCTGTTTT 5154
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5155 TATTCTCCTCCTTACCTTGATGACTATGGGGAGACCGACCAGGGACTCAGACGGGGAAATCCTTTACATTTATG 5228
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5229 CAAAGAGCGATTCAAGAAGATTCAGAAGCTCTGGCACCAACACAGTGTCACAGAGGAAATTGGACATGCACAGG 5302
Query 1318 ----------------------------------------- 1317
Sbjct 5303 AAGCCAATCAGACACTGGTTGGCATTGACTGGCAACATTTA 5343
