Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07865
- Subject:
- XM_017010596.1
- Aligned Length:
- 5279
- Identities:
- 1294
- Gaps:
- 3979
Alignment
Query 1 ATGGCGTCGGAGCTAGAGCCAGAGGTGCAGGCCATCGACCGGAGCTTGCTGGAATGTTCGGCCGAGGAGATTGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGTCGGAGCTAGAGCCAGAGGTGCAGGCCATCGACCGGAGCTTGCTGGAATGTTCGGCCGAGGAGATTGC 74
Query 75 GGGGAAATGGCTGCAAGCAACTGACCTCACTAGAGAAGTGTACCAGCATTTAGCCCACTATGTACCCAAAATCT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGGGAAATGGCTGCAAGCAACTGACCTCACTAGAGAAGTGTACCAGCATTTAGCCCACTATGTACCCAAAATCT 148
Query 149 ACTGCAGGGGTCCCAACCCTTTTCCACAGAAAGAAGACATGCTGGCACAGCATGTTTTGTTGGGACCAATGGAA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACTGCAGGGGTCCCAACCCTTTTCCACAGAAAGAAGACATGCTGGCACAGCATGTTTTGTTGGGACCAATGGAA 222
Query 223 TGGTACCTTTGTGGTGAAGATCCTGCATTTGGATTTCCAAAACTTGAGCAAGCAAACAAACCTTCTCATCTTTG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGGTACCTTTGTGGTGAAGATCCTGCATTTGGATTTCCAAAACTTGAGCAAGCAAACAAACCTTCTCATCTTTG 296
Query 297 TGGTCGTGTTTTTAAAGTAGGAGAGCCTACATATTCTTGCAGAGACTGTGCAGTTGATCCAACTTGTGTTTTGT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGGTCGTGTTTTTAAAGTAGGAGAGCCTACATATTCTTGCAGAGACTGTGCAGTTGATCCAACTTGTGTTTTGT 370
Query 371 GCATGGAGTGCTTTTTGGGAAGTATTCACAGAGATCATCGATATAGGATGACAACATCAGGAGGTGGAGGTTTC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCATGGAGTGCTTTTTGGGAAGTATTCACAGAGATCATCGATATAGGATGACAACATCAGGAGGTGGAGGTTTC 444
Query 445 TGTGACTGTGGTGATACTGAAGCCTGGAAAGAGGGTCCTTACTGTCAAAAACATGAACTTAACACCTCTGAAAT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGTGACTGTGGTGATACTGAAGCCTGGAAAGAGGGTCCTTACTGTCAAAAACATGAACTTAACACCTCTGAAAT 518
Query 519 TGAGGAAGAAGAGGATCCTCTTGTTCATTTATCAGAAGATGTGATAGCAAGAACTTATAACATTTTTGCTATTA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGAGGAAGAAGAGGATCCTCTTGTTCATTTATCAGAAGATGTGATAGCAAGAACTTATAACATTTTTGCTATTA 592
Query 593 CGTTTCGGTATGCAGTAGAAATATTAACCTGGGAAAAAGAAAGTGAATTGCCAGCAGATTTAGAGATGGTAGAG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CGTTTCGGTATGCAGTAGAAATATTAACCTGGGAAAAAGAAAGTGAATTGCCAGCAGATTTAGAGATGGTAGAG 666
Query 667 AAGAGTGACACCTACTATTGCATGCTGTTTAATGATGAGGTTCACACCTACGAACAAGTTATTTATACTCTTCA 740
||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 667 AAGAGTGACACCTACTATTGCATGCTGTTTAATGATGAGGTTCACACCTATGAACAAGTTATTTATACTCTTCA 740
Query 741 GAAAGCTGTTAACTGTACACAAAAAGAAGCTATTGGTTTTGCAACTACAGTAGATCGAGATGGGCGTAGGTCTG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GAAAGCTGTTAACTGTACACAAAAAGAAGCTATTGGTTTTGCAACTACAGTAGATCGAGATGGGCGTAGGTCTG 814
Query 815 TTCGATATGGAGATTTTCAGTATTGTGAGCAAGCAAAATCAGTAATTGTGAGAAATACCAGTAGACAGACAAAG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTCGATATGGAGATTTTCAGTATTGTGAGCAAGCAAAATCAGTAATTGTGAGAAATACCAGTAGACAGACAAAG 888
Query 889 CCACTCAAAGTTCAAGTTATGCATTCGTCTATTGTCGCACATCAGAATTTTGGTTTGAAACTTTTGTCTTGGCT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCACTCAAAGTTCAAGTTATGCATTCGTCTATTGTCGCACATCAGAATTTTGGTTTGAAACTTTTGTCTTGGCT 962
Query 963 GGGAAGTATTATTGGATATTCAGATGGCCTTCGCCGGATTTTATGTCAAGTTGGTTTACAAGAAGGGCCAGATG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGGAAGTATTATTGGATATTCAGATGGCCTTCGCCGGATTTTATGTCAAGTTGGTTTACAAGAAGGGCCAGATG 1036
Query 1037 GTGAAAACTCTTCTCTAGTGGACAGACTGATGCTTAGTGATTCCAAATTATGGAAAGGTGCTAGGAGTGTATAT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GTGAAAACTCTTCTCTAGTGGACAGACTGATGCTTAGTGATTCCAAATTATGGAAAGGTGCTAGGAGTGTATAT 1110
Query 1111 CATCAGTTGTTCATGAGCAGTCTGCTTATGGATTTGAAATACAAGAAACTATTTGCTGTTCGATTTGCAAAAAA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CATCAGTTGTTCATGAGCAGTCTGCTTATGGATTTGAAATACAAGAAACTATTTGCTGTTCGATTTGCAAAAAA 1184
Query 1185 CTATGAGCGTTTGCAGAGTGATTATGTGACAGATGACCACGACAGAGAGTTTTCAGTCGCAGACCTCTCGGTTC 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTATGAGCGTTTGCAGAGTGATTATGTGACAGATGACCACGACAGAGAGTTTTCAGTCGCAGACCTCTCGGTTC 1258
Query 1259 AGATATTCACGGTTCCTTCACTTTTCTCTATCTCTGCTGGGCGCAGTGGCTCACCTCTG--------------- 1317
|||||||||||||||||||||| |||| ||.| .|||||.|.|.|
Sbjct 1259 AGATATTCACGGTTCCTTCACT------------TGCT---CGAA--TGCTCATCACAGAAGAAAACTTAATGA 1315
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1316 GCATTATCATTAAGACTTTTATGGATCATTTGAGACATCGAGATGCCCAGGGCAGATTTCAGTTTGAACGATAC 1389
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1390 ACTGCTTTACAAGCCTTCAAATTTAGGAGAGTACAGAGCCTTATTTTAGATCTCAAGTATGTGTTAATTAGCAA 1463
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1464 ACCAACTGAATGGTCAGATGAGCTGAGGCAGAAGTTCCTAGAAGGGTTTGATGCCTTTTTGGAATTACTAAAAT 1537
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1538 GTATGCAGGGAATGGATCCAATTACACGTCAAGTAGGACAACATATTGAAATGGAACCAGAGTGGGAAGCAGCC 1611
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1612 TTCACACTACAAATGAAATTAACACATGTCATTTCAATGATGCAGGACTGGTGTGCTTCAGATGAAAAAGTGTT 1685
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1686 AATCGAAGCTTACAAGAAATGTCTCGCTGTACTGATGCAGTGTCATGGTGGTTATACTGATGGTGAACAGCCAA 1759
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1760 TCACACTAAGCATTTGTGGACATTCAGTGGAAACTATCAGATACTGTGTTTCCCAAGAAAAAGTTAGCATTCAC 1833
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1834 CTCCCAGTTTCTCGCTTACTTGCAGGTTTACATGTATTATTAAGCAAAAGTGAAGTGGCATATAAATTTCCAGA 1907
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1908 GCTCCTACCTCTAAGTGAACTTAGCCCACCCATGTTGATAGAACACCCTCTTAGATGTCTTGTTCTGTGTGCCC 1981
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1982 AAGTACATGCCGGAATGTGGAGAAGAAATGGGTTCTCTCTAGTAAACCAGATTTATTACTACCATAATGTGAAA 2055
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2056 TGCAGACGTGAGATGTTTGACAAGGATGTAGTAATGCTTCAGACAGGTGTCTCCATGATGGATCCAAATCATTT 2129
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2130 CCTGATGATCATGCTCAGCCGCTTTGAACTTTATCAGATTTTCAGTACTCCAGACTATGGAAAAAGATTTAGTT 2203
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2204 CTGAGATTACCCATAAGGATGTTGTTCAGCAGAACAATACTCTAATAGAAGAAATGCTATACCTCATTATAATG 2277
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2278 CTTGTTGGAGAGAGATTTAGTCCTGGAGTTGGACAGGTAAATGCTACAGATGAAATCAAGCGAGAGATTATCCA 2351
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2352 TCAGTTGAGTATCAAGCCTATGGCTCATAGTGAATTGGTAAAGTCTTTACCTGAAGATGAGAACAAGGAGACTG 2425
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2426 GCATGGAGAGTGTAATCGAAGCAGTTGCCCATTTCAAGAAACCTGGATTAACAGGACGAGGCATGTATGAACTG 2499
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2500 AAACCAGAATGTGCCAAAGAGTTCAACTTGTATTTCTATCACTTTTCAAGGGCAGAACAGTCCAAGGCAGAAGA 2573
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2574 AGCGCAACGGAAATTGAAAAGACAAAATAGAGAAGATACAGCACTCCCACCTCCGGTGTTGCCTCCATTCTGCC 2647
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2648 CTCTGTTTGCAAGCCTGGTTAACATTTTGCAGTCAGATGTCATGTTGTGCATCATGGGAACAATTCTGCAATGG 2721
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2722 GCTGTGGAACATAATGGATATGCCTGGTCAGAGTCCATGCTGCAAAGGGTGTTACATTTAATTGGCATGGCACT 2795
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2796 ACAAGAAGAAAAACAACATTTAGAGAATGTCACGGAAGAGCATGTAGTAACATTTACCTTCACTCAGAAGATAT 2869
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2870 CAAAACCTGGTGAAGCGCCAAAAAATTCTCCTAGCATACTAGCTATGCTGGAAACACTACAAAATGCTCCCTAC 2943
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2944 CTAGAAGTCCACAAAGACATGATTCGGTGGATATTGAAGACTTTTAATGCTGTTAAAAAGATGAGGGAGAGTTC 3017
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3018 ACCTACCAGTCCCGTGGCAGAGACAGAAGGAACCATAATGGAAGAGAGTTCAAGGGACAAAGACAAAGCTGAGA 3091
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3092 GGAAGAGAAAAGCAGAGATTGCCAGACTGCGCAGAGAAAAGATCATGGCTCAGATGTCTGAAATGCAGCGGCAT 3165
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3166 TTTATTGATGAAAACAAAGAACTCTTTCAGCAGACATTAGAACTGGATGCCTCAACCTCTGCTGTTCTTGATCA 3239
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3240 TAGCCCTGTGGCTTCAGATATGACACTTACAGCACTGGGCCCCGCACAAACTCAGGTTCCTGAACAAAGACAAT 3313
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3314 TCGTTACATGTATATTGTGTCAAGAGGAGCAAGAAGTTAAAGTGGAAAGCAGGGCAATGGTCTTGGCAGCATTT 3387
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3388 GTTCAGAGATCAACTGTATTATCAAAAAACAGAAGTAAATTTATTCAAGATCCAGAAAAATATGATCCATTATT 3461
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3462 CATGCACCCTGATCTGTCTTGTGGAACACACACTAGTAGCTGTGGGCACATTATGCATGCCCATTGTTGGCAAA 3535
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3536 GGTATTTTGATTCCGTTCAAGCTAAAGAACAGCGAAGGCAACAGAGATTACGCTTACATACGAGCTATGATGTA 3609
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3610 GAAAACGGAGAATTCCTTTGCCCCCTTTGTGAATGCTTGAGTAATACTGTTATTCCTCTGCTGCTTCCTCCAAG 3683
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3684 AAATATTTTTAACAAGTTAAATTTTTCAGACCAACCAAATCTGACTCAGTGGATTAGAACAATATCTCAGCAAA 3757
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3758 TAAAAGCATTACAGTTTCTTAGGAAAGAAGAAAGTACTCCTAATAATGCCTCTACAAAGAATTCAGAAAATGTG 3831
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3832 GATGAATTACAGCTCCCTGAAGGGTTCAGGCCTGATTTTCGTCCTAAGATCCCTTATTCTGAGAGCATAAAAGA 3905
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3906 AATGCTAACGACATTTGGAACTGCTACCTACAAGGTGGGACTAAAGGTTCATCCCAATGAAGAGGATCCTCGTG 3979
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3980 TTCCCATAATGTGTTGGGGTAGCTGCGCGTACACCATCCAAAGCATAGAAAGAATTTTGAGTGATGAAGATAAA 4053
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4054 CCATTGTTTGGTCCTTTACCTTGCAGACTGGATGACTGTCTTAGGTCATTGACGAGATTTGCCGCAGCACACTG 4127
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4128 GACAGTGGCATCAGTTTCAGTGGTGCAAGGACATTTTTGTAAACTTTTTGCATCACTGGTGCCTAATGACAGCC 4201
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4202 ATGAGGAACTTCCATGCATATTAGATATTGACATGTTTCATTTATTGGTGGGCTTGGTGCTTGCATTTCCTGCG 4275
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4276 TTGCAGTGTCAGGATTTTTCAGGGATCAGCCTTGGCACTGGAGACCTTCACATTTTCCATCTGGTTACTATGGC 4349
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4350 ACACATCATACAGATCTTACTTACCTCATGTACAGAAGAGAATGGCATGGATCAAGAAAATCCCCCTTGTGAAG 4423
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4424 AAGAATCAGCAGTTCTTGCTTTGTATAAAACACTTCACCAGTATACGGGAAGTGCCTTGAAAGAAATACCATCC 4497
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4498 GGCTGGCATCTGTGGAGGAGTGTCAGAGCTGGAATCATGCCTTTCCTGAAGTGTTCTGCTTTATTTTTTCATTA 4571
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4572 CTTAAATGGAGTTCCTTCCCCACCCGACATTCAAGTTCCTGGAACAAGCCATTTTGAACATTTATGTAGCTATC 4645
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4646 TTTCCCTACCAAACAACCTCATTTGCCTTTTTCAAGAAAATAGTGAGATAATGAATTCACTGATTGAAAGTTGG 4719
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4720 TGCCGTAACAGTGAAGTTAAAAGATATCTAGAAGGTGAAAGAGATGCTATAAGATATCCAAGAGAATCTAACAA 4793
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4794 ATTAATAAACCTTCCAGAGGATTACAGCAGCCTCATTAATCAAGCATCCAATTTCTCGTGCCCGAAATCAGGTG 4867
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4868 GTGATAAGAGCAGAGCCCCAACTCTGTGCCTTGTGTGCGGATCTCTGCTGTGCTCCCAGAGTTACTGCTGCCAG 4941
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4942 ACTGAACTGGAAGGGGAGGATGTAGGAGCCTGCACAGCTCACACCTACTCCTGTGGCTCTGGAGTGGGCATCTT 5015
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5016 CCTGAGAGTACGGGAATGTCAGGTGCTATTTTTAGCTGGCAAAACCAAAGGCTGTTTTTATTCTCCTCCTTACC 5089
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5090 TTGATGACTATGGGGAGACCGACCAGGGACTCAGACGGGGAAATCCTTTACATTTATGCAAAGAGCGATTCAAG 5163
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5164 AAGATTCAGAAGCTCTGGCACCAACACAGTGTCACAGAGGAAATTGGACATGCACAGGAAGCCAATCAGACACT 5237
Query 1318 ------------------------- 1317
Sbjct 5238 GGTTGGCATTGACTGGCAACATTTA 5262
