Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07929
- Subject:
- XM_006522446.3
- Aligned Length:
- 1595
- Identities:
- 884
- Gaps:
- 580
Alignment
Query 1 ATGGGGAAGCGACAGCACCAAAAGGACAAAATGTACATTACCTGTGCTGAATACACTCACTTTTATGGTGGCAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GAAGCCAGATCTCCCACAAACAAATTTTCGTCGTTTACCTTTTGACCACTGCAGTCTCTCTCTGCAGCCCTTTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCTACCCAGTCTGCACTCCCGATGGCATCGTCTTTGACTTACTGAACATTGTTCCATGGCTTAAGAAGTACGGG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 ACCAACCCCAGCAATGGAGAGAAGCTGGACGGGAGGTCCCTGATCAAGCTGAACTTTTCCAAGAACAGTGAGGG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GAAGTACCACTGCCCAGTGCTGTTTACCGTGTTCACCAACAACACCCACATCGTGGCTGTGAGGACGACCGGCA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ACGTCTACGCCTATGAGGCAGTGGAACAGCTAAATATCAAGGCCAAGAACTTCCGGGACCTGCTGACCGACGAG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CCCTTCTCCCGGCAGGACATCATCACCCTCCAGGACCCCACCAATTTGGACAAGTTCAATGTCTCTAACTTCTA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TCATGTGAAGAATAACATGAAAATAATAGACCCAGATGAAGAGAAGGCCAAACAGGACCCGTCTTATTATCTGA 592
||||.||||||||||||||||||.||.|||||||||||.|||||.|||||||||.|||
Sbjct 1 ----------------ATGAGAATAATAGACCCAGATGAGGAAAAGGCCAAACAAGACCCATCTTATTATTTGA 58
Query 593 AAAATACAAATGCCGAGACCCGAGAGACCCTGCAGGAGCTCTACAAGGAGTTCAAAGGGGACGAGATTCTGGCA 666
||||.||||||.|.|||||..|||||||.||.||||||||||||||.|||||||||||.||.||||||.|.|||
Sbjct 59 AAAACACAAATTCGGAGACGAGAGAGACGCTACAGGAGCTCTACAAAGAGTTCAAAGGAGATGAGATTTTAGCA 132
Query 667 GCCACCATGAAGGCC-CCGGAGAAGAAGAAAGTGGACAAGCTGAATGCTGCCCACTATTCCACAGGGAAGGTCA 739
||.|||||| ||||| ||.|||||||||||.||||||.|.||||||||.||||||||.||||||||||||||||
Sbjct 133 GCTACCATG-AGGCCACCTGAGAAGAAGAAGGTGGACCAACTGAATGCGGCCCACTACTCCACAGGGAAGGTCA 205
Query 740 GCGCTTCCTTCACCTCCACCGCGATGGTCCCGGAGACCACACATGAAGCAGCTGCCATCGACGAGGATGTGCTG 813
|.||.|||||||||||.||.||.|||||.||.||||||||.|||||||||||||.|||.||.||.|||||.|||
Sbjct 206 GTGCATCCTTCACCTCTACTGCCATGGTGCCCGAGACCACGCATGAAGCAGCTGTCATTGATGAAGATGTACTG 279
Query 814 CGCTACCAGTTTGTGAAGAAGAAGGGCTACGTGCGGCTGCACACCAACAAGGGCGACCTCAACCTGGAGCTGCA 887
||||||||||||||||||||.||||||||.||..||||.||||||||||||||||||||.|||.|.||||||||
Sbjct 280 CGCTACCAGTTTGTGAAGAAAAAGGGCTATGTAAGGCTTCACACCAACAAGGGCGACCTTAACTTAGAGCTGCA 353
Query 888 CTGCGACCTGACACCAAAAACCTGCGAAAACTTCATCAGGCTTTGCAAGAAGCATTATTACGATGGCACCATCT 961
|||.||||||||||||||||||||.|||||||||||||.|||.||||||||.||.|||||.|||||.|||||||
Sbjct 354 CTGTGACCTGACACCAAAAACCTGTGAAAACTTCATCAAGCTCTGCAAGAAACAGTATTATGATGGTACCATCT 427
Query 962 TCCACAGATCCATCCGGAACTTTGTGATCCAAGGGGGCGACCCCACAGGCACAGGCACGGGTGGGGAGTCATAC 1035
|.|||||.||||||.||||||||||||||||.||.||.|||||||||||.||||||||.|||||.|||||||.|
Sbjct 428 TTCACAGGTCCATCAGGAACTTTGTGATCCAGGGCGGTGACCCCACAGGTACAGGCACAGGTGGAGAGTCATTC 501
Query 1036 TGGGGGAAGCCCTTCAAAGACGAGTTCCGGCCCAACCTCTCGCACACGGGCCGCGGCATCCTCAGCATGGCCAA 1109
|||||.|||||.||||||||.||||||||.||||||||.||.|||||||||||.||..|.||||||||||||||
Sbjct 502 TGGGGCAAGCCTTTCAAAGATGAGTTCCGTCCCAACCTTTCACACACGGGCCGTGGGGTGCTCAGCATGGCCAA 575
Query 1110 CTCCGGGCCCAACAGCAACAGGTCTCAATTCTTCATCACGTTTCGCTCCTGTGCCTACCTGGACAAGAAGCATA 1183
.||.||||||||||.|||||..|||||.|||||||||||.||.||.|||||.||.||||||||.||||||||||
Sbjct 576 TTCGGGGCCCAACACCAACAAATCTCAGTTCTTCATCACATTCCGATCCTGCGCTTACCTGGATAAGAAGCATA 649
Query 1184 CCATCTTTGGACGGGTTGTTGGGGGCTTTGACGTACTGACAGCCATGGAGAATGTGGAGAGTGACCCCAAAACT 1257
||||||||||||||||||||||||||||||||...||||||||||||||||||||||||||||||||.||||||
Sbjct 650 CCATCTTTGGACGGGTTGTTGGGGGCTTTGACACGCTGACAGCCATGGAGAATGTGGAGAGTGACCCTAAAACT 723
Query 1258 GACCGCCCTAAGGAGGAGATCCGCATTGATG--CCACTACAGTGTTCGTGGACCCCTATGAGGAGGCCGATGCC 1329
|||||.|||||||||||..|.|.||| ||| |.||.||||||||.||||||||||||||||||||.||||||
Sbjct 724 GACCGTCCTAAGGAGGAAGTGCTCAT--ATGTACAACCACAGTGTTTGTGGACCCCTATGAGGAGGCTGATGCC 795
Query 1330 CAGATTGCGCAGGAGCG---GAAGACACAGC-TCAAGGTAGCCCCGGAGACCAAAGTGAAGAGCAGCCAGCCCC 1399
||||||||.|||||.|| ||||||||||| || ||||.|..||.|||.||||.||.||||..||.|||||||
Sbjct 796 CAGATTGCCCAGGAACGGAAGAAGACACAGCATC-AGGTGGATCCAGAGGCCAAGGTCAAGATGAGTCAGCCCC 868
Query 1400 AGGCAGGGAGCCAGGGCCCCCAGACCTTCCGCCAGGGCGTGGGCAAGTACATCAACCCAGCAGCCAC----CGA 1469
||.|.||.|.||||||.||||||||.|.|||||||||.|||||||||||||||.||||.||.||||| |||
Sbjct 869 AGCCTGGAAACCAGGGACCCCAGACATACCGCCAGGGGGTGGGCAAGTACATCCACCCTGCGGCCACGAAACGA 942
Query 1470 GCAGCAGAGGAAGAGCCCTCAACCAG---TGCCACTGTCCCCATGTCCAAGAAGAAGCCCAGTCGGGGTTTTGG 1540
.|||||||||||||.||.||.||||| |||||| |||||.|.|||||||.|.||||||||||||.|||||
Sbjct 943 TCAGCAGAGGAAGAACCATCGACCAGCACTGCCAC---CCCCACGGCCAAGAAAAGGCCCAGTCGGGGCTTTGG 1013
Query 1541 GGACTTCAGCTCCTGGTAGCAGCAGGCTGCCTGATGACCAC 1581
||||||||||||||||
Sbjct 1014 GGACTTCAGCTCCTGG------------------------- 1029