Protein Global Alignment

Description

• Query: ccsbBroad304_07957
• Subject: NM_001365643.1
• Aligned Length: 1235
• Identities: 639
• Gaps: 390

Alignment

Query    1  MRGGKCNMLSSLGCLLLCGSITLALGNAQKLPKGKRPNLKVHINTTSDSILLKFLRPSPNVKLEGLLLGYGSNV  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  MRGGKCNMLSSLGCLLLCGSITLALGNAQKLPKGKRPNLKVHINTTSDSILLKFLRPSPNVKLEGLLLGYGSNV  74

Query   75  SPNQYFPLPAEGKFTEAIVDAEPKYLIVVRPAPPPSQKKSCSGKTRSRKPLQLVVGTLTPSSVFLSWGFLINPH  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  SPNQYFPLPAEGKFTEAIVDAEPKYLIVVRPAPPPSQKKSCSGKTRSRKPLQLVVGTLTPSSVFLSWGFLINPH  148

Query  149  HDWTLPSHCPNDRFYTIRYREKDKEKKWIFQICPATETIVENLKPNTVYEFGVKDNVEGGIWSKIFNHKTVVGS  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  HDWTLPSHCPNDRFYTIRYREKDKEKKWIFQICPATETIVENLKPNTVYEFGVKDNVEGGIWSKIFNHKTVVGS  222

Query  223  KKVNGKIQSTYDQDHTVPAYVPRKLIPITIIKQVIQNVTHKDSAKSPEKAPLGGVILVHLIIPGLNETTVKLPA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  KKVNGKIQSTYDQDHTVPAYVPRKLIPITIIKQVIQNVTHKDSAKSPEKAPLGGVILVHLIIPGLNETTVKLPA  296

Query  297  SLMFEISDALKTQLAKNETLALPAESKTPEVEKISARPTTVTPETVPRSTKPTTSSALDVSET-----------  359
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
Sbjct  297  SLMFEISDALKTQLAKNETLALPAESKTPEVEKISARPTTVTPETVPRSTKPTTSSALDVSETTLVLSKRTPET  370

Query  360  --------------------------------------TLASSEKPWIVPTAKISEDSKVLQPQTATYDVFSSP  395
                                                  ||||||||||||||||||||||||||||||||||||
Sbjct  371  LQTILIPQFELPLSTLAPKSLPEFPEAKTPFPFEKPRGTLASSEKPWIVPTAKISEDSKVLQPQTATYDVFSSP  444

Query  396  TTSDEPEISDSYTATSDRILDSIPPKTSRTLEQPRATLAPSETPFVPQKLEIFTSPEMQPTTPAPQQTTSIPST  469
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TTSDEPEISDSYTATSDRILDSIPPKTSRTLEQPRATLAPSETPFVPQKLEIFTSPEMQPTTPAPQQTTSIPST  518

Query  470  PKRRPRPKPPRTKPERTTSAGTITPKISKSPEPTWTTPAPGKTQFISLKPKIPLSPEVTHTKPAPK-QT-----  537
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||. ||     
Sbjct  519  PKRRPRPKPPRTKPERTTSAGTITPKISKSPEPTWTTPAPGKTQFISLKPKIPLSPEVTHTKPAPEPQTLLPSQ  592

Query  538  ---------------------------PRAPPKPKTSPRPRIPQTQP------------VPKVPQRVTAKPKTS  572
                                       ||..|.|||.|.|..|...|            ||.........|||.
Sbjct  593  STIGPETPGTKPSTTLAPRKTKRPGRRPRPRPRPKTTPSPEVPKSKPALEPATIQPEPLVPTTASKPSERPKTT  666

Query  573  PSPEVSYTTPA--PKDVLLPHKPY--------PEVSQSEPAPLETRGIPFIPMISPSPSQEELQTT-LEETDQS  635
            ..|......|.  |...||| ||.        |..|.|||.|.||.          .||.....|| .|.....
Sbjct  667  HRPDAPQIQPGSKPPKQLLP-KPQTTAEPDMPPTKSVSEPVPFETE----------APSMTIVPTTDIEPVTVR  729

Query  636  TQEPFTTKIPRTTELAKTTQAPHRFYTTVRPRT----SDKPHIRPGVKQAP--------RPSGADRNVSVDSTH  697
            |....||..|.|.....|........||.||.|    .|...|.||...||        ||......    ..|
Sbjct  730  TEATVTTLAPKTSQRTRTRRPRPKHKTTPRPETLQTKLDFGPITPGTSSAPTTTTKRTRRPHPKPKT----TPH  799

Query  698  P--------TKKPGTRRPPLP-----PRPTHPRRKPLPP---NNVTGKPGSAGIISSGP---ITTPPLR--STP  750
            |        ||.....|||.|     |.|..|..||.|.   ..||..|.......|..   ...|.||  .||
Sbjct  800  PEVPQTKLATKTSKRTRPPRPRPKTTPSPQAPETKPVPATVLEPVTLRPEASTTLASKTSQRTRRPRLRTKTTP  873

Query  751  RPTGTPLERIETDIKQPTVPASGEELENITDFSSSPTRETDPLGK--PRFKGPHVRYIQKPDNSPCSI-TDSVK  821
            ||.........|....|................|..||...|..|  |....|........|..|... |...|
Sbjct  874  RPEAPESKPVPTAELKPVTLRTETWVTTQAPKTSQRTRRPRPKTKTTPSPEVPQTKLVPSTDLEPGTLRTEAPK  947

Query  822  ---------------RFPKEEATEGNATS----PPQNPPTNLTVVTVEGCPSFVILDWEKPLNDTVTEYEVISR  876
                           .||  |.|....|.    |...|.|.................|.|              
Sbjct  948  TMVVTTVLEPDTFRTKFP--ETTLAPKTQRTRRPRPRPKTTSSPEVPQNKSGKCMNPWLK--------------  1005

Query  877  ENGSFSGKNKSIQMTNQTFSTVENLKPNTSYEFQVKPKNPLGEGPVSNTVAFSTESADPRVSEPVSAGRDAIWT  950
                                                                                      
Sbjct 1006  --------------------------------------------------------------------------  1005

Query  951  ERPFNSDSYSECKGKQYVKRTWYKKFVGVQLCNSLRYKIYLSDSLTGKFYNIGDQRGHGEDHCQFVDSFLDGRT  1024
                                                                                      
Sbjct 1006  --------------------------------------------------------------------------  1005

Query 1025  GQQLTSDQLPIKEGYFRAVRQEPVQFGEIGGHTQINYVQWYECGTTIPGKW  1075
                                                               
Sbjct 1006  ---------------------------------------------------  1005