Construct: ORF ccsbBroad304_07957

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011380.1_s304c1, BRDN0000407229
Derived from:
ccsbBroadEn_07957
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ABI3BP (25890)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07957
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 25890 ABI3BP ABI family member 3 binding... NM_015429.3 99.9% 100% 408G>A
2 human 25890 ABI3BP ABI family member 3 binding... NM_001349332.1 97.6% 97.7% 408G>A;2029_2103del
3 human 25890 ABI3BP ABI family member 3 binding... NM_001349331.1 83.5% 83.5% 408G>A;1597_2136del;2426_2427ins78
4 human 25890 ABI3BP ABI family member 3 binding... NM_001365642.1 79.5% 79.5% (many diffs)
5 human 25890 ABI3BP ABI family member 3 binding... NM_001365643.1 66.8% 51.7% (many diffs)
6 human 25890 ABI3BP ABI family member 3 binding... NM_001349330.1 65% 65% (many diffs)
7 human 25890 ABI3BP ABI family member 3 binding... XM_005247306.3 64.8% 64.8% (many diffs)
8 human 25890 ABI3BP ABI family member 3 binding... XM_005247305.3 64% 64% (many diffs)
9 human 25890 ABI3BP ABI family member 3 binding... XM_011512657.2 63.4% 63.4% 408G>A;1082_1228del;1739_3445del
10 human 25890 ABI3BP ABI family member 3 binding... XM_024453445.1 63.2% 63.2% (many diffs)
11 human 25890 ABI3BP ABI family member 3 binding... XM_005247303.3 62.9% 63% (many diffs)
12 human 25890 ABI3BP ABI family member 3 binding... XM_011512660.2 62.9% 57.5% (many diffs)
13 human 25890 ABI3BP ABI family member 3 binding... XM_011512654.2 62.6% 62.6% (many diffs)
14 human 25890 ABI3BP ABI family member 3 binding... XM_011512653.2 62.5% 62.5% (many diffs)
15 human 25890 ABI3BP ABI family member 3 binding... XM_017006107.2 62.3% 62.3% 408G>A;1082_1228del;1739_3538del
16 human 25890 ABI3BP ABI family member 3 binding... XM_005247302.3 62.2% 62.3% (many diffs)
17 human 25890 ABI3BP ABI family member 3 binding... XM_011512651.2 62.2% 62.2% (many diffs)
18 human 25890 ABI3BP ABI family member 3 binding... XM_006713570.3 62% 62.1% (many diffs)
19 human 25890 ABI3BP ABI family member 3 binding... XM_005247300.3 61.9% 61.9% (many diffs)
20 human 25890 ABI3BP ABI family member 3 binding... XM_005247299.4 61.6% 61.6% (many diffs)
21 human 25890 ABI3BP ABI family member 3 binding... XM_005247298.3 61.5% 61.6% (many diffs)
22 human 25890 ABI3BP ABI family member 3 binding... XM_011512649.2 61.5% 61.6% (many diffs)
23 human 25890 ABI3BP ABI family member 3 binding... XM_005247296.3 61.5% 61.5% (many diffs)
24 human 25890 ABI3BP ABI family member 3 binding... XM_005247295.3 61.5% 61.5% (many diffs)
25 human 25890 ABI3BP ABI family member 3 binding... XM_011512647.2 61.4% 61.4% (many diffs)
26 human 25890 ABI3BP ABI family member 3 binding... XM_024453444.1 61.4% 61.4% (many diffs)
27 human 25890 ABI3BP ABI family member 3 binding... XM_005247294.3 61.2% 61.2% (many diffs)
28 human 25890 ABI3BP ABI family member 3 binding... XM_006713571.3 61.1% 55.9% (many diffs)
29 human 25890 ABI3BP ABI family member 3 binding... XM_011512646.2 60.9% 61% (many diffs)
30 human 25890 ABI3BP ABI family member 3 binding... XM_011512644.2 60.8% 60.9% (many diffs)
31 human 25890 ABI3BP ABI family member 3 binding... XM_011512645.2 60.8% 60.9% (many diffs)
32 human 25890 ABI3BP ABI family member 3 binding... XM_011512643.2 60.8% 60.8% (many diffs)
33 human 25890 ABI3BP ABI family member 3 binding... XM_005247289.3 60.7% 60.8% (many diffs)
34 human 25890 ABI3BP ABI family member 3 binding... XM_005247290.3 60.7% 60.8% (many diffs)
35 human 25890 ABI3BP ABI family member 3 binding... XM_011512641.2 60.7% 60.8% (many diffs)
36 human 25890 ABI3BP ABI family member 3 binding... XM_017006106.2 60.7% 60.8% (many diffs)
37 human 25890 ABI3BP ABI family member 3 binding... XM_005247288.3 60.7% 60.7% (many diffs)
38 human 25890 ABI3BP ABI family member 3 binding... XM_005247287.3 60.6% 60.7% (many diffs)
39 human 25890 ABI3BP ABI family member 3 binding... XM_005247285.3 60.6% 60.6% (many diffs)
40 human 25890 ABI3BP ABI family member 3 binding... XM_011512639.2 60.6% 60.6% (many diffs)
41 human 25890 ABI3BP ABI family member 3 binding... XM_005247284.3 60.5% 60.5% (many diffs)
42 human 25890 ABI3BP ABI family member 3 binding... XM_017006105.2 60.5% 60.5% (many diffs)
43 human 25890 ABI3BP ABI family member 3 binding... XM_005247283.3 60.4% 60.4% (many diffs)
44 human 25890 ABI3BP ABI family member 3 binding... XM_005247282.3 60.4% 60.4% (many diffs)
45 human 25890 ABI3BP ABI family member 3 binding... NM_001349329.1 60.3% 60.3% (many diffs)
46 human 25890 ABI3BP ABI family member 3 binding... XM_006713572.3 60.1% 60.2% (many diffs)
47 human 25890 ABI3BP ABI family member 3 binding... XM_005247281.3 59.9% 59.9% (many diffs)
48 human 25890 ABI3BP ABI family member 3 binding... XM_005247301.3 59.8% 59.8% (many diffs)
49 human 25890 ABI3BP ABI family member 3 binding... XM_011512648.2 59.5% 59.5% (many diffs)
50 human 25890 ABI3BP ABI family member 3 binding... XM_005247293.3 59.3% 59.3% (many diffs)
51 human 25890 ABI3BP ABI family member 3 binding... XM_006713569.3 59.3% 59.3% (many diffs)
52 human 25890 ABI3BP ABI family member 3 binding... XM_011512656.2 58.7% 58.7% (many diffs)
53 human 25890 ABI3BP ABI family member 3 binding... XM_011512640.2 58.7% 58.7% (many diffs)
54 human 25890 ABI3BP ABI family member 3 binding... XM_005247291.3 58.4% 58.5% (many diffs)
55 human 25890 ABI3BP ABI family member 3 binding... XM_005247309.2 43.3% 43.3% (many diffs)
56 mouse 320712 Abi3bp ABI gene family, member 3 (... NM_001014422.2 75.3% 72.8% (many diffs)
57 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522282.1 75.1% 72.3% (many diffs)
58 mouse 320712 Abi3bp ABI gene family, member 3 (... NM_001014424.2 74.3% 71.8% (many diffs)
59 mouse 320712 Abi3bp ABI gene family, member 3 (... NM_178790.4 74% 71.8% (many diffs)
60 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522283.1 68.4% 67.1% (many diffs)
61 mouse 320712 Abi3bp ABI gene family, member 3 (... NM_001014399.2 68.1% 67.1% (many diffs)
62 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522284.1 66.6% 65.4% (many diffs)
63 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522285.1 66.2% 65.4% (many diffs)
64 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522276.2 65% 61.6% (many diffs)
65 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522274.1 61.3% 58.3% (many diffs)
66 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522272.2 60.5% 57.1% (many diffs)
67 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522270.1 58.7% 55.4% (many diffs)
68 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522268.1 57.9% 54.9% (many diffs)
69 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522286.3 57.8% 54.8% (many diffs)
70 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_017317038.1 57.5% 54.5% (many diffs)
71 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522266.2 57.4% 54.3% (many diffs)
72 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522265.1 57.3% 54.1% (many diffs)
73 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522264.1 57.1% 54.2% (many diffs)
74 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522263.1 57.1% 54.1% (many diffs)
75 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522262.1 56.9% 54% (many diffs)
76 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522260.1 56.5% 53.5% (many diffs)
77 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522257.3 56.5% 53.5% (many diffs)
78 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522256.2 56.5% 53.4% (many diffs)
79 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522258.1 56.5% 53.5% (many diffs)
80 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522259.1 56.5% 53.5% (many diffs)
81 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522255.2 56.4% 53.4% (many diffs)
82 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522254.2 56.3% 53.2% (many diffs)
83 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522253.1 56.3% 53.2% (many diffs)
84 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522252.1 55.8% 52.7% (many diffs)
85 mouse 320712 Abi3bp ABI gene family, member 3 (... XM_006522251.1 55.7% 52.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
3291
ORF length:
3225
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcg aggtggcaaa tgcaacatgc tctccagttt ggggtgtcta cttctctgtg
121gaagtattac actagccctg ggaaatgcac agaaattgcc aaaaggtaaa aggccaaacc
181tcaaagtcca catcaatacc acaagtgact ccatcctctt gaagttcttg cgtccaagtc
241caaatgtaaa gcttgaaggt cttctcctgg gatatggcag caatgtatca ccaaaccagt
301acttccctct tcccgctgaa gggaaattca cagaagctat agttgatgca gagccgaaat
361atctgatagt tgtgcgacct gctccacctc caagtcaaaa gaagtcatgt tcaggtaaaa
421ctcgttctcg caaacctctg cagctggtgg ttggcactct gacaccgagc tcagtcttcc
481tgtcctgggg tttcctcatc aacccacacc atgactggac attgccaagt cactgtccca
541atgacagatt ttatacaatt cgctatcgag aaaaggataa agaaaagaag tggatttttc
601aaatctgtcc agccactgaa acaattgtgg aaaacctaaa gcccaacaca gtttatgaat
661ttggagtgaa agacaatgtg gaaggtggaa tttggagtaa gattttcaat cacaagactg
721ttgttggaag taaaaaagta aatgggaaaa tccaaagtac ctatgaccaa gaccacacag
781tgccagcata tgtcccaagg aaactaatcc caataacaat catcaagcaa gtgattcaga
841atgttactca caaggattca gctaaatccc cagaaaaagc tccactggga ggagtgatac
901tagtccacct tattattcca ggtcttaatg aaactactgt aaaacttcct gcatccctaa
961tgtttgagat ttcagatgca ctcaagacac aattagctaa gaatgaaacc ttggcattac
1021ctgccgaatc taaaacacca gaggttgaaa aaatctcagc acgacccaca acagtgactc
1081ctgaaacagt tccaagaagc actaaaccca ctacgtctag tgcattagat gtttcagaaa
1141caacactggc ttcaagtgaa aagccatgga ttgtgcctac agctaaaata tctgaagatt
1201ccaaagttct gcagcctcaa actgcaactt atgatgtttt ctcaagccct acaacatcag
1261atgagcctga gatatcagat tcctacacag caacaagtga tcgtattctg gattctatcc
1321cacctaaaac ttctagaact cttgaacagc caagggcaac actggctcca agtgaaacac
1381catttgttcc tcaaaaactg gaaatcttta ccagtccaga aatgcagcct acgacacctg
1441ctccccagca aactacatct atcccttcta cacctaaacg acgcccccgg cccaaaccgc
1501caagaaccaa acctgaaaga accacaagtg ccggaacaat tacacctaaa atttctaaaa
1561gccctgaacc tacatggaca acaccggctc ccggtaaaac acaatttatt tctctgaaac
1621ctaaaatccc tctcagccca gaagtgacac acaccaaacc tgctcccaag cagacaccac
1681gtgctcctcc taagccaaaa acatcaccac gcccaagaat cccacaaaca caaccagttc
1741ctaaggtgcc ccagcgtgtt actgcaaaac caaaaacgtc accaagtcca gaagtgtcat
1801acaccacacc tgctccaaaa gatgtgctcc ttcctcataa accataccct gaggtctctc
1861agagcgaacc tgctcctcta gagacacgag gcatcccttt tatacccatg atttccccaa
1921gtcctagtca agaggaacta cagaccactc tggaagaaac agaccaatcc acccaagaac
1981ctttcacaac taagattcca cgaacaactg aactagcaaa gacaactcag gcgccacaca
2041gattttatac tactgtgagg cccagaacat ctgacaagcc acacatcaga cctggggtca
2101agcaagcacc caggccatca ggtgctgata gaaatgtatc agtggactct acccacccca
2161ctaaaaagcc agggactcgc cgcccaccct tgccacccag acctacacac ccacgaagaa
2221aacctttacc accaaataat gtcactggaa agccaggaag tgcaggaatc atttcatcag
2281gcccaataac tacaccaccc ctgaggtcaa cacccaggcc tactggaact cccttggaga
2341gaatagagac agatataaag caaccaacag ttcctgcctc tggagaagaa ctggaaaata
2401taactgactt tagctcaagc ccaacaagag aaactgatcc tcttgggaag ccaagattca
2461aaggacctca tgtgcgatac atccaaaagc ctgacaacag tccctgctcc attactgact
2521ctgtcaaacg gttccccaaa gaggaggcca cagaggggaa tgccaccagc ccaccacaga
2581acccacccac caacctcact gtggtcaccg tggaagggtg cccctcattt gtcatcttgg
2641actgggaaaa gccactaaat gacactgtca ctgaatatga agttatatcc agagaaaatg
2701ggtcattcag tgggaagaac aagtccattc aaatgacaaa tcagacattt tccacagtag
2761aaaatctgaa accaaacacg agttatgaat tccaggtgaa acccaaaaac ccgcttggtg
2821aaggcccggt cagcaacaca gtggcattca gtactgaatc agcggaccca agagtgagtg
2881agccagtttc tgcaggaaga gatgccatct ggactgaaag accctttaat tcagactctt
2941actcagagtg taagggcaaa caatatgtca aaaggacatg gtataaaaaa tttgtaggag
3001tgcagctgtg caactctctc agatacaaga tttacttgag cgactccctc acaggaaaat
3061tttataacat aggtgatcag aggggccatg gagaagatca ctgccagttt gtggattcat
3121ttttagatgg acgcactggg cagcaactca cttctgacca gttaccaatc aaagaaggtt
3181atttcagagc agttcgccag gaacctgtcc aatttggaga aataggtggt cacacccaaa
3241tcaattatgt tcagtggtat gaatgtggga ctacaattcc tggaaaatgg tacccaactt
3301tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
3361agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)