Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07971
Subject:
NM_019999.2
Aligned Length:
1190
Identities:
931
Gaps:
145

Alignment

Query    1  ATGGC--GGCGGTGGTAGCTGCTACGGCGCTGAAGAGCCGGGG----GGCGAGAAATGCCCGCGTCCTCCGGGG  68
            |||||  |||.|.|.|.|||       |||      |||..||    ||              || ||||||..
Sbjct    1  ATGGCTTGGCAGGGCTGGCT-------CGC------GCCTTGGTTGTGG--------------GT-CTCCGGCT  46

Query   69  GATTCTCGCAGGAGCCACAGCTAACAAGGTTTCT----CATAACAGGACCCGGGCCCTGCAAAGCCACAGCTCC  138
            |.|       ||     |.||||       ||||    |.|         ||.|             |.|||||
Sbjct   47  GTT-------GG-----CTGCTA-------TTCTTCGCCTT---------CGTG-------------CTGCTCC  79

Query  139  TCAGAGGGCAAGGAGGAACCTGAACCCCTATCCCCGGAGCTGGAATACATTCCCAGAA-AGAGGGG--------  203
            |.||                          ||||||.|||||         ||.|||| ||.||||        
Sbjct   80  TGAG--------------------------TCCCCGCAGCTG---------CCAAGAACAGCGGGGTTTCCGCG  118

Query  204  -------CAAGAACCCCATGAAAGCTGTGGGACTGGCCT---------GGTACAGCCTGTACACCCGCACCTGG  261
                   ||.||..|.|| |..|||     |.|||..||         ||||.||||||||||||||.||||||
Sbjct  119  GCCTCCTCATGACGCGCA-GCCAGC-----GGCTGCTCTTCCGAATCGGGTATAGCCTGTACACCCGAACCTGG  186

Query  262  CTCGGGTACCTCTTCTACCGACAGCAGCTGCGCAGGGCTCGGAATCGCTACCCTAAAGGCCACTCGAAAACCCA  335
            ||.||||||||||||||||||||||||||.||.|||||||||||||||||.||.|||||||||||.|||||.||
Sbjct  187  CTTGGGTACCTCTTCTACCGACAGCAGCTTCGGAGGGCTCGGAATCGCTATCCCAAAGGCCACTCCAAAACTCA  260

Query  336  GCCCCGCCTCTTCAATGGAGTGAAGGTGCTTCCCATCCCTGTCCTCTCGGACAACTACAGCTACCTCATCATCG  409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  261  GCCCCGCCTCTTCAATGGAGTGAAGGTGCTTCCCATCCCTGTCCTCTCGGACAACTACAGCTACCTCATCATCG  334

Query  410  ACACCCAGGCCCAGCTGGCTGTGGCTGTGGACCCTTCAGACCCTCGGGCTGTGCAGGCTTCCATTGAAAAGGAA  483
            ||||||||||...||||||.||||||||||||||.||||||||..|||||||||||||||||||||||||||||
Sbjct  335  ACACCCAGGCTGGGCTGGCAGTGGCTGTGGACCCCTCAGACCCGAGGGCTGTGCAGGCTTCCATTGAAAAGGAA  408

Query  484  GGGGTCACCTTGGTCGCCATTCTGTGTACTCACAAGCACTGGGACCACAGTGGAGGGAACCGTGACCTCAGCCG  557
            .|.||.|.||||||.||||||||.||.||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct  409  AGAGTTAACTTGGTTGCCATTCTCTGCACCCACAAGCACTGGGACCACAGTGGAGGGAACCGTGACCTCAGCCG  482

Query  558  GCGGCACCGGGACTGTCGGGTGTACGGGAGCCCTCAGGACGGCATCCCCTACCTCACCCATCCCCTGTGTCATC  631
            |||||||.||||||||||.|||||.||||||||||||||.||.|||||||||||||||||.|||||||||||||
Sbjct  483  GCGGCACAGGGACTGTCGAGTGTATGGGAGCCCTCAGGATGGTATCCCCTACCTCACCCACCCCCTGTGTCATC  556

Query  632  AAGATGTGGTCAGCGTGGGACGGCTTCAGATCCGGGCCCTGGCTACACCTGGCCACACACAAGGCCATCTGGTC  705
            ||||||||||||||||||||||.||||||||.||.|||||.||.||.|||||||||||.|||||||||||||||
Sbjct  557  AAGATGTGGTCAGCGTGGGACGACTTCAGATTCGAGCCCTAGCCACCCCTGGCCACACTCAAGGCCATCTGGTC  630

Query  706  TACCTACTGGATGGGGAGCCCTACAAGGGTCCCTCCTGCCTCTTCTCAGGGGACCTGCTCTTCCTCTCTGGCTG  779
            |||||.||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct  631  TACCTGCTGGATGGGGAGCCCTACAAAGGTCCTTCCTGCCTCTTCTCAGGGGACCTGCTCTTCCTCTCTGGCTG  704

Query  780  TGGGCGGACCTTTGAGGGCAATGCAGAGACCATGCTGAGCTCACTGGACACTGTGCTGGGGCTAGGGGATGACA  853
            |||.||||||||.||.||||..||.||||||||||||||||||||||||||||||.|.|..||.||||||||||
Sbjct  705  TGGACGGACCTTCGAAGGCACAGCGGAGACCATGCTGAGCTCACTGGACACTGTGTTAGACCTGGGGGATGACA  778

Query  854  CCCTTCTGTGGCCTGGTCATGAGTATGCAGAGGAGAACCTGGGCTTTGCAGGTGTGGTGGAGCCCGAGAACCTG  927
            ||||.|||||||||||.|||||.||.|||||.||||||||||||||||||||.||||||||||||||||||.||
Sbjct  779  CCCTGCTGTGGCCTGGGCATGAATACGCAGAAGAGAACCTGGGCTTTGCAGGCGTGGTGGAGCCCGAGAACTTG  852

Query  928  GCCCGGGAGAGGAAGATGCAGTGGGTGCAGCGGCAGCGGCTGGAGCGCAAGGGCACGTGCCCATCTACCCTGGG  1001
            ||.||.||||||||||||||||||||.|||.||||.|||.||||.||||||.||||.||||||||.||||||||
Sbjct  853  GCTCGTGAGAGGAAGATGCAGTGGGTACAGAGGCAACGGATGGAACGCAAGAGCACATGCCCATCCACCCTGGG  926

Query 1002  AGAGGAGCGCTCCTACAACCCGTTCCTGAGAACCCACTGCCTGGCGCTACAGGAGGCTCTGGGGCCGGGGCCGG  1075
            ||||||.|||.||||||||||.||||||||||||||.|||||||..||||||||||||||||||||.|||||.|
Sbjct  927  AGAGGAACGCGCCTACAACCCATTCCTGAGAACCCATTGCCTGGAACTACAGGAGGCTCTGGGGCCAGGGCCAG  1000

Query 1076  GCCCCACTGGGGATGATGACTACTCCCGGGCCCAGCTCCTGGAAGAGCTCCGCCGGCTGAAGGATATGCACAAG  1149
            |||||||..|.|||||.|.||.|||||||||||||||||||||.|||||.|||||.||||||||.|||||.||.
Sbjct 1001  GCCCCACCAGTGATGACGGCTGCTCCCGGGCCCAGCTCCTGGAGGAGCTGCGCCGCCTGAAGGACATGCATAAA  1074

Query 1150  AGCAAG  1155
            ||||||
Sbjct 1075  AGCAAG  1080

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