Nucleotide Global Alignment

Description

• Query: ccsbBroad304_07990
• Subject: XM_006504752.3
• Aligned Length: 1335
• Identities: 808
• Gaps: 405

Alignment

Query    1  ATGAACCTGGCGAGCCAGAGCGGGGAGGCCGGCGCCGGCCAGCTGCTCTTCGCCAACTTCAACCAGGACAACAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GTCCCTAGCTGTTGGTAGTAAGTCCGGTTATAAATTTTTCTCCCTTTCTTCTGTGGATAAGCTGGAACAGATCT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATGAATGCACCGATACGGAAGATGTGTGCATTGTAGAGAGATTGTTCTCCAGCAGCCTAGTGGCCATCGTGAGC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CTTAAAGCACCAAGGAAGCTAAAGGTTTGCCACTTTAAGAAGGGAACTGAGATCTGCAACTACAGCTACTCCAA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CACGATTCTGGCTGTGAAGCTCAACAGGCAGAGGCTGATAGTATGCCTGGAGGAGTCCCTGTACATCCACAACA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TTCGGGACATGAAGGTGCTGCATACGATCAGGGAGACGCCTCCAAACCCTGCAGGCCTGTGTGCGCTGTCAATC  444
                    ||||||||.||.|||||.|||.|.|||||.||.|||||||||||||||.|||||||.||||||||.
Sbjct    1  --------ATGAAGGTACTTCATACCATCCGAGAGACACCCCCAAACCCTGCAGGCTTGTGTGCACTGTCAATA  66

Query  445  AACAACGACAACTGCTACTTGGCGTACCCAGGGAGCGCGACCATCGGAGAGGTGCAGGTCTTCGATACCATTAA  518
            |||||.||||||||||||||||||||.||||||||.||||.|||.||||||||||||||||||||.||||||||
Sbjct   67  AACAATGACAACTGCTACTTGGCGTATCCAGGGAGTGCGAGCATTGGAGAGGTGCAGGTCTTCGACACCATTAA  140

Query  519  TTTGAGAGCTGCAAACATGATTCCGGCTCACGACAGTCCTTTAGCGGCACTGGCCTTTGACGCAAGTGGAACTA  592
            .||||||||||||||||||||.||.|||||.||.|||||.|||||.||.|||||.|||||.||||||||.||.|
Sbjct  141  CTTGAGAGCTGCAAACATGATCCCAGCTCATGATAGTCCCTTAGCAGCCCTGGCTTTTGATGCAAGTGGGACCA  214

Query  593  AACTTGCCACGGCTTCGGAGAAGGGGACCGTGATTAGGGTATTTTCCATTCCAGAAGGACAAAAACTCTTTGAG  666
            |.||||||||.|||||.|||||||||||.||||||.||||.||||||||||||||.|||||.||.||.||||||
Sbjct  215  AGCTTGCCACTGCTTCTGAGAAGGGGACTGTGATTCGGGTGTTTTCCATTCCAGAGGGACAGAAGCTGTTTGAG  288

Query  667  TTTCGGAGAGGAGTAAAGAGGTGCGTGAGCATCTGCTCCCTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGC  740
            ||..||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  289  TTCAGGAGAGGAGTGAAGAGGTGTGTGAGCATCTGCTCCCTGGCCTTCAGCATGGACGGCATGTTCCTCTCCGC  362

Query  741  CTCCAGCAACACTGAGACCGTGCACATCTTCAAACTCGAGACTGTGAAAGAAAAACCCCCAGAGGAGCCCACCA  814
            .|||||||||||.||.||.|||||||||||||||||.|||.||||||..||||||||.||.||.||||||||||
Sbjct  363  ATCCAGCAACACCGAAACAGTGCACATCTTCAAACTTGAGGCTGTGAGGGAAAAACCTCCGGAAGAGCCCACCA  436

Query  815  CCTGGACCGGGTACTTCGGGAAAGTGCTCATGGCCTCCACCAGCTACCTGCCTTCCCAAGTGACAGAAATGTTC  888
            |||||||.||.|||||.|||||.||.||||||||.||.||||||||||||||.||.||||||||||||||||||
Sbjct  437  CCTGGACTGGCTACTTTGGGAAGGTTCTCATGGCATCTACCAGCTACCTGCCCTCACAAGTGACAGAAATGTTC  510

Query  889  AACCAGGGCAGAGCCTTCGCCACGGTCCGCCTGCCATTCTGCGGCCACAAAAACATCTGCTCGCTAGCCACAAT  962
            |||||||||||.|||||||||||.|||||||||||||||||.||||||||||||||||||||.|||.|||||||
Sbjct  511  AACCAGGGCAGGGCCTTCGCCACTGTCCGCCTGCCATTCTGTGGCCACAAAAACATCTGCTCACTAACCACAAT  584

Query  963  TCAGAAGATCCCGCGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTACAACCTGGACCCCCAGGAGG  1036
            ||||||||||||.||||||.||||.||.||..|.||.||.||..||||||||||||||||||||||||||||||
Sbjct  585  TCAGAAGATCCCACGGTTGCTGGTAGGAGCATCAGATGGCTATTTGTACATGTACAACCTGGACCCCCAGGAGG  658

Query 1037  GCGGCGAGTGTGCCCTGATGAAGCAGCACCGGCTGGACGGCAGTCTGGAAACGACCAATGAGATCTTGGACTCT  1110
            |.|||||||||||.||||||...||||||.||||.||.||||||.||||.|||||||.|||.|||.|.||||||
Sbjct  659  GAGGCGAGTGTGCGCTGATGCGTCAGCACAGGCTTGATGGCAGTATGGAGACGACCAGTGAAATCGTAGACTCT  732

Query 1111  GCCTCTCACGACTGCCCCTTAGTCACTCAGACATACGGCGCAGCTGCAGGAAAAGGTACTTACGTGCCTTCATC  1184
            ||.|||||.|||||||||||||..||.|||||.||||||.||||.||.|..||||||.|.||.|||||.||.||
Sbjct  733  GCATCTCATGACTGCCCCTTAGCAACACAGACGTACGGCACAGCAGCTGCCAAAGGTGCCTATGTGCCCTCGTC  806

Query 1185  CCCAACGAGACTT---------------------------GCCTACACAGACGACCTGGGTGCTGTGGGTGGCG  1231
            |||.||.||||||                           |||||||||||.||||||||||||||||||||.|
Sbjct  807  CCCCACAAGACTTGGGAAAGGGCAGGACGCCAACTTAGAAGCCTACACAGATGACCTGGGTGCTGTGGGTGGTG  880

Query 1232  CCTGCCTGGAGGACGAGGCCAGCGCCCTGCGCCTGGATGAGGACAGCGAGCACCCGCCCATGATTCTTCGGACT  1305
            |.|||||.|||||.||.||||||||.||||||||||||||.||||||||.||.||.|||||||||||.||||||
Sbjct  881  CATGCCTAGAGGATGAAGCCAGCGCTCTGCGCCTGGATGAAGACAGCGAACATCCTCCCATGATTCTCCGGACT  954

Query 1306  GAC  1308
            |||
Sbjct  955  GAC  957