Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08101
- Subject:
- XR_002958480.1
- Aligned Length:
- 2290
- Identities:
- 329
- Gaps:
- 1935
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTCCGGCGCACTGATCCCGCCTGGGGCCGGCTGAGTGGCACTTAAGCGGGCCATGCCATGCAACCTTGGGCG 74
Query 1 --------------------------------------------------------------------ATGATG 6
||||||
Sbjct 75 CTGCCAACCGTGGGCGAGCTCTGGGTGTGCGGGCGGCCTGGCGCGGCGCTCCGCTGTGTCAGCGTGTTATGATG 148
Query 7 CCGTCCCGTACCAACCTGGCTACTGGAATCCCCAGTAGTAAAGTGAAATATTCAAGGCTCTCCAGCACAGACGA 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCGTCCCGTACCAACCTGGCTACTGGAATCCCCAGTAGTAAAGTGAAATATTCAAGGCTCTCCAGCACAGACGA 222
Query 81 TGGCTACATTGACCTTCAGTTTAAGAAAACCCCTCCTAAGATCCCTTATAAGGCCATCGCACTTGCCACTGTGC 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGGCTACATTGACCTTCAGTTTAAGAAAACCCCTCCTAAGATCCCTTATAAGGCCATCGCACTTGCCACTGTGC 296
Query 155 TGTTTTTGATTGGCGCCTTTCTCATTATTATAGGCTCCCTCCTGCTGTCAGGCTACATCAGCAAAGGG------ 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGTTTTTGATTGGCGCCTTTCTCATTATTATAGGCTCCCTCCTGCTGTCAGGCTACATCAGCAAAGGGAGTCTC 370
Query 223 -------------GGG-----------GCAGACC-----------------------GGG-------------- 235
||| ||.|||| |||
Sbjct 371 GAATCCACCTCACGGGAACAAAAGAAAGCTGACCACAAACATCTACCAGCATCCCGTGGGTACATGATGGGAGG 444
Query 236 -----------------CCG---------------------TTCCA---------------------------- 243
||| |||||
Sbjct 445 CATCAGTGGGAGGAGTCCCGAAGGAGGACTCAGCTCAAGGCTTCCAGAAGGAAGAGGAACACAGGTGTCATCAC 518
Query 244 ---------GTGCTGATCATTGGCATTCTGGT----GTT-------------CCT---ACCCGGA--------- 279
||.||||.||.|||.|..|.||| ||| ||| |.|.|||
Sbjct 519 CTGACTGAGGTTCTGACCAATGGAACACAGGTGGAAGTTGTTGGAGAAAACGCCTTAAAACGGGAACAGCTGCA 592
Query 280 --------------------TTTTA-----CCACCTGC----------------------------GCATCGCT 300
||||| |||||||| ||.|.||.
Sbjct 593 ATATCAGCTGCAAGACATTCTTTTACCTTTCCACCTGCCTGGGACCTGGATGTGGAACTGCAGTGTGCCTTGCA 666
Query 301 TACT--------------------ATGCAT--------------------CCAAAGGCT-ACCGTGGTTACTCC 333
.||| |||.|| ||..||||| |.||..||.||||
Sbjct 667 AACTTGAAGAGAACGACCTTGATAATGGATGGTGAAGCAAGAAAGAGGAGCCTGAGGCTGAGCGCAGTGACTC- 739
Query 334 TATGA----TGACATTCCAG-ACTTT-----GCTGAC------------------------------------- 360
| ||..||.|||| ||||| |||.|.
Sbjct 740 ----ACACCTGTAATCCCAGCACTTTGGGAGGCTAAGGTGGGCAGATTGCTTGAGCCCAGGAATTTGAGACCAG 809
Query 361 -------------------------------------------------------------------------- 360
Sbjct 810 CCTGGATAACGTTTTGCCTTTTCTGGGATGCTCCAGAACTCTAGGAGGACAAAAAAGCCCTTCATGTCCAACAT 883
Query 361 -------------------------------------------------------------------------- 360
Sbjct 884 TAGAGGAAGGCAGCATCCTCCAAAGAAGAGTGACTCACCCTGACCAGCTGGCAGAGAAGCCCAAGGCCAGGCCC 957
Query 361 -------------------------------------------------------------------------- 360
Sbjct 958 TGGGATGTGGAGAGCCAGTCCCAGCCTGGTCTGGAAGGAGGCGTGCCAGGGTGGCAATGATGCATCACCCACGT 1031
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1032 GGTTTACTGGCCTTGACTAACCTGACCATGACTTAGCAAAGCTGTGAGGTTTCCCAGTCTGGGCCAATATGGGT 1105
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1106 GTGCGGGTAGAATACAGCCAGCATGGGGAGGCGAAGGCCTGAGCAGCATGCCAAAACCGGGAACTTGTGGCCTC 1179
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1180 CTTCGCCATCACCGCAGCCCCTCTCCACCCTTCCTCACATCAGCCCCTGCTTCCCCGGTCATTCCAGGGACGGG 1253
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1254 GGTCTCCAGTGCAGCCCACTCCTCGTCATGGTATTACTCCAGTACAACTCCAATCTGACCTACAGTTTTGGTGT 1327
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1328 TTGGCATGGCAGGGGCGTGATCCCTACTACATACAACCAGTGAGTCACAGACCTTTGGTCCAGTCTGTGGACTG 1401
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1402 GTCACTTCCTGTCCTTCATATGAGCTCCCACAGAACCCGGGTCCTGCTCCAGAGCCCAGGCGTTAGACAGGCCC 1475
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1476 TGGCCTTAACCCGGTTATCTCAGAGGCATCCCACATGCGTCCAGGACACCTGGGAAGCTGGTGGTAGTGAGGAG 1549
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1550 TGAAGGGCAGTAGGGGGCCTCTGCTCTGGCCCCCTGGCTTCCTGCAAGCCAGGAAAATAGGCCCCACTCACAGC 1623
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1624 CACTTCTCCCCTGCTGGCTAGCCTCAAAGAGATCATTAGAGGGACTTTGCTGCCCATAACAACAAGGACCATTG 1697
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1698 GTGAAAACAAGCAGCTCAGGGAAATGGATCATGGAAATCACAGAAACAGAGATTTCTCTGTTCCCATCCCCTAA 1771
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1772 GATCACCAGTGCCCCTGCTCCTGACAATTGGTCACCTCTCAGCCAACATCTGAGCCTCTGGTGTCCCTTCCTTG 1845
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1846 TGACAGAGTTCATGATACTCATGGGTTATTTCAATGCATTGGGAAGTTAATCTTTTTTTTTTTGAGAGATGGGG 1919
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1920 TCTTGCCATGTTGCCTAGGCTGTTCTCAAACTCGAGCTCAGGTGATCTTTCCCACCTCGGCCTCCCAAAGTGCT 1993
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1994 GGGATCACAGGTGAGAGCCACCACACCTGGCTGAGGAAGTTAGTCTTTATAATGAGACTAAACCTGCCTTCCTA 2067
Query 361 -------------------------------------------------------------------------- 360
Sbjct 2068 TATTTTTCATCTTTTCATGTGCTTATTGGATATTTGCATTTCATTCATGGAAAAAAAAAGATATCTTTTTGGTT 2141
Query 361 -------------------------------------------------------------------------- 360
Sbjct 2142 TTTGTTTTTTTAATAGAGATGAGATCTCACTTTGTTGGCCCAGGCTGGTCTCAAACTCCTAAGCTCAAGTGATC 2215
Query 361 ---------------------------------------------------------------------- 360
Sbjct 2216 TTCCCACCTTGGTCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACGCCTAGCCCCTGGTATTTTT 2285
