Construct: ORF ccsbBroad304_08101

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007210.1_s304c1, BRDN0000402658
Derived from:
ccsbBroadEn_08101
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMEM230 (29058)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08101
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 29058 TMEM230 transmembrane protein 230 NM_001009924.1 99.7% 99.1% 356A>C
2 human 29058 TMEM230 transmembrane protein 230 NM_001009925.1 99.7% 99.1% 356A>C
3 human 29058 TMEM230 transmembrane protein 230 NM_001330984.1 99.7% 99.1% 356A>C
4 human 29058 TMEM230 transmembrane protein 230 NM_001330985.1 99.7% 99.1% 356A>C
5 human 29058 TMEM230 transmembrane protein 230 NM_001330986.1 99.7% 99.1% 356A>C
6 human 29058 TMEM230 transmembrane protein 230 NM_014145.4 99.7% 99.1% 356A>C
7 human 29058 TMEM230 transmembrane protein 230 XM_017027836.2 99.7% 99.1% 356A>C
8 human 29058 TMEM230 transmembrane protein 230 NM_001330987.1 66.4% 56.9% (many diffs)
9 human 29058 TMEM230 transmembrane protein 230 NM_001009923.2 65.3% 65% 1_189del;545A>C
10 human 29058 TMEM230 transmembrane protein 230 XM_024451879.1 46.3% 40.1% (many diffs)
11 human 29058 TMEM230 transmembrane protein 230 XR_002958485.1 26% (many diffs)
12 human 29058 TMEM230 transmembrane protein 230 XR_002958479.1 25.6% (many diffs)
13 human 29058 TMEM230 transmembrane protein 230 XR_002958476.1 23.6% (many diffs)
14 human 29058 TMEM230 transmembrane protein 230 XR_002958484.1 23.1% (many diffs)
15 human 29058 TMEM230 transmembrane protein 230 XR_002958482.1 22.3% (many diffs)
16 human 29058 TMEM230 transmembrane protein 230 XR_002958481.1 21.9% (many diffs)
17 human 29058 TMEM230 transmembrane protein 230 XR_002958483.1 21.7% (many diffs)
18 human 29058 TMEM230 transmembrane protein 230 XR_002958478.1 14.7% (many diffs)
19 human 29058 TMEM230 transmembrane protein 230 XR_002958480.1 14.3% (many diffs)
20 human 29058 TMEM230 transmembrane protein 230 XR_002958477.1 12.8% (many diffs)
21 mouse 70612 Tmem230 transmembrane protein 230 NM_001141971.1 90.8% 95.8% (many diffs)
22 mouse 70612 Tmem230 transmembrane protein 230 NM_027478.3 90.8% 95.8% (many diffs)
23 mouse 70612 Tmem230 transmembrane protein 230 XM_006500166.3 90.8% 95.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
426
ORF length:
360
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgat gccgtcccgt accaacctgg ctactggaat ccccagtagt aaagtgaaat
121attcaaggct ctccagcaca gacgatggct acattgacct tcagtttaag aaaacccctc
181ctaagatccc ttataaggcc atcgcacttg ccactgtgct gtttttgatt ggcgcctttc
241tcattattat aggctccctc ctgctgtcag gctacatcag caaagggggg gcagaccggg
301ccgttccagt gctgatcatt ggcattctgg tgttcctacc cggattttac cacctgcgca
361tcgcttacta tgcatccaaa ggctaccgtg gttactccta tgatgacatt ccagactttg
421ctgactaccc aactttcttg tacaaagtgg ttggtaagcc tatccctaac cctctcctcg
481gtctcgattc tacgtagtaa tgagctagcg ctaaccggtg gcgcgttaag tcgacaatca
541acctctggat ta

Download FASTA (ORF) (Full)