Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08101
- Subject:
- XR_002958482.1
- Aligned Length:
- 1475
- Identities:
- 329
- Gaps:
- 1120
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGCCGGCTGAGTGGCACTTAAGCGGGCCATGCCATGCAACCTTGGGCGCTGCCAACCGTGGGCGAGCTCTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGTGCGGGCGGCCTGGCGCGGCGCTCCGGTAAGGCGTGTGTGCGGCAGGGCGGGGACAGAACCGTCCTCTCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTCTGGGCGTGTCCGAGACCGCGCTCCCCGCCGAAATCAAGCTCCGAGTCATCCGTGTGGGGCATTCGTCCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTGGCACAGTTGGCCTCTTTCCAGAAGCCCGTTTTGTTTGTTTTACGTCTAAATTCGCGTCGGTTCTTATTTC 296
Query 1 ----------------------------------------ATGATGCCGTCCCGTACCAACCTGGCTACTGGAA 34
||||||||||||||||||||||||||||||||||
Sbjct 297 TCTCCCTGGCAAGGTCTGAAGACGGCTGTGTCAGCGTGTTATGATGCCGTCCCGTACCAACCTGGCTACTGGAA 370
Query 35 TCCCCAGTAGTAAAGTGAAATATTCAAGGCTCTCCAGCACAGACGATGGCTACATTGACCTTCAGTTTAAGAAA 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCCCCAGTAGTAAAGTGAAATATTCAAGGCTCTCCAGCACAGACGATGGCTACATTGACCTTCAGTTTAAGAAA 444
Query 109 ACCCCTCCTAAGATCCCTTATAAGGCCATCGCACTTGCCACTGTGCTGTTTTTGATTGGCGCCTTTCTCATTAT 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ACCCCTCCTAAGATCCCTTATAAGGCCATCGCACTTGCCACTGTGCTGTTTTTGATTGGCGCCTTTCTCATTAT 518
Query 183 TATAGGCTCCCTCCTGCTGTCAGGCTACATCAGCAAAGGG-------------------GGG-----------G 226
|||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct 519 TATAGGCTCCCTCCTGCTGTCAGGCTACATCAGCAAAGGGAGTCTCGAATCCACCTCACGGGAACAAAAGAAAG 592
Query 227 CAGACC-----------------------GGG-------------------------------CCG-------- 238
|.|||| ||| |||
Sbjct 593 CTGACCACAAACATCTACCAGCATCCCGTGGGTACATGATGGGAGGCATCAGTGGGAGGAGTCCCGAAGGAGGA 666
Query 239 -------------TTCCA-------------------------------------GTGCTGATCATTGGCATTC 262
||||| ||.||||.||.|||.|..|
Sbjct 667 CTCAGCTCAAGGCTTCCAGAAGGAAGAGGAACACAGGTGTCATCACCTGACTGAGGTTCTGACCAATGGAACAC 740
Query 263 TGGT----GTT-------------CCT---ACCCGGA-----------------------------TTTTA--- 284
.||| ||| ||| |.|.||| |||||
Sbjct 741 AGGTGGAAGTTGTTGGAGAAAACGCCTTAAAACGGGAACAGCTGCAATATCAGCTGCAAGACATTCTTTTACCT 814
Query 285 --CCACCTGC----------------------------GCATCGCTTACT--------------------ATGC 308
|||||||| ||.|.||..||| |||.
Sbjct 815 TTCCACCTGCCTGGGACCTGGATGTGGAACTGCAGTGTGCCTTGCAAACTTGAAGAGAACGACCTTGATAATGG 888
Query 309 AT--------------------CCAAAGGCT-ACCGTGGTTACTCCTATGA----TGACATTCCAG-ACTTT-- 354
|| ||..||||| |.||..||.|||| | ||..||.|||| |||||
Sbjct 889 ATGGTGAAGCAAGAAAGAGGAGCCTGAGGCTGAGCGCAGTGACTC-----ACACCTGTAATCCCAGCACTTTGG 957
Query 355 ---GCTGAC----------------------------------------------------------------- 360
|||.|.
Sbjct 958 GAGGCTAAGGTGGGCAGATTGCTTGAGCCCAGGAATTTGAGACCAGCCTGGATAACGCGTGGTGGGCAGTTCCA 1031
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1032 GGACACCTGACATGTTCCCACTGCAGAAACCACACGGGTTTCTCCAGCACCACTGAGACTTGCTCAGCCTGTGT 1105
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1106 AGAGTAGCCTGGACATACTGGGGCTTTATTTTCCTGAGGACAACCCTCAACCAATGAGTGCCAGGAATCAGTGA 1179
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1180 GTAACTGCCCACCTGTTTTCCCCCCTCACCGGATAATTCTGAAGCATCTTTTACCCAGCTCTGCAGAGGATCCC 1253
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1254 TGCAGGACTGAGCCTGGTGCCCGCAGTGATCATCTGCACTTCAATGCACCTTTCCTTGGCTTTCCGCCCTGCGC 1327
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1328 CGTTTCTCACTTCTCCACTACTTGGAGTCCTTTCCAAAGAAACTATCCATACCTGAAATCTACTTTTACGTAAA 1401
Query 361 --------------------------------------------------------------------- 360
Sbjct 1402 CCCAAGCTAAGACGGTGGAATATTGCTTCATTTTGAAGTCAGTGGGAGCAATTAAAAGCTTAAACAGGG 1470
