Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08124
- Subject:
- NM_001079903.1
- Aligned Length:
- 1873
- Identities:
- 1385
- Gaps:
- 242
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGATGGGCGCTGCGTCCCTGGAGGGCACGCGGGAGAGTTTTCTCTGTCATCCGGGGGCTACCGAAGTGTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGAAGCAGCCGAAGTCTCCCCAGGAACATCCCCAGAAGGAGCTGGAAAAAGCCTCACCCCCAGCTCTTCAGTC 148
Query 1 --------------------ATGCTGGAACGTCGTTGCAGGGGCCCCCTGGCCATGGGCCTGGCCCAGCCCCGA 54
||||||||||..||.||||||||||||..|||||||||||..||.||||||.|.
Sbjct 149 TTCAGGCAGAGGAAGAACCGATGCTGGAACAGCGCTGCAGGGGCCCCACGGCCATGGGCCCAGCTCAGCCCTGG 222
Query 55 CTCCTTTCTGGGCCCTCCCAGGAGTCACCCCAGACCCTGGGGAAGGAGTCCCGCGGGCTGAGGCAACAAGGCAC 128
|||.||||||||||||||||||||||..|||||.|| || |.|.|||.|||||.|.||.||||.
Sbjct 223 CTCTTTTCTGGGCCCTCCCAGGAGTCCTCCCAGCCC-----GA-------CAGAGGGTTGAGGTACCAGGGCAA 284
Query 129 GTCAGTGGCCCAGTCTGGTGCCCAAGCCCCAGGCAGGGCCCATCGCTGTGCCCACTGTCGAAGGCACTTCCCTG 202
.||| ||.|||.|..|.|.||||.|||||||||.||.||||||.||||||||||||||.|.||.||||||.|
Sbjct 285 ATCA---GCTCAGCCAAGAGGCCAAACCCCAGGCAAGGTCCATCGTTGTGCCCACTGTCGGAAGCGCTTCCCGG 355
Query 203 GCTGGGTGGCTCTGTGGCTTCACACCCGCCGGTGCCAGGCCCGGCTGCCCTTGCCCTGCTCTGAGTGTGGCCGT 276
||||||||||.|||||||||||..|.||.||||||||||||||||||||..||||||||..|||.||...||..
Sbjct 356 GCTGGGTGGCCCTGTGGCTTCATGCTCGGCGGTGCCAGGCCCGGCTGCCTCTGCCCTGCCATGAATGCAACCAG 429
Query 277 CGCTTTCGCCATGCCCCCTTCTTAGCACTGCACCGCCAGGTCCATGCTGCTGCCACCCCAGACCTGGGCTTTGC 350
|||||||||||.||||||||||||||.|||||.|..|||||.||||||.||||...|||.||||||||.||...
Sbjct 430 CGCTTTCGCCACGCCCCCTTCTTAGCGCTGCATCTTCAGGTTCATGCTTCTGCAGTCCCCGACCTGGGTTTCAT 503
Query 351 CTGCCACCTCTGTGGGCAGAGCTTCCGAGGCTGGGTGGCCCTGGTTCTGCATCTGCGGGCCCATTCAGCTGCAA 424
|||||||||.||||||||.|||||||||||.|||||.|||||||||||||||||||||||.||.||||||.|||
Sbjct 504 CTGCCACCTATGTGGGCATAGCTTCCGAGGATGGGTAGCCCTGGTTCTGCATCTGCGGGCTCACTCAGCTTCAA 577
Query 425 AGCGGCCCATCGCTTGTCCCAAATGCGAGAGACGCTTCTGGCGACGAAAGCAGCTTCGAGCTCATCTGCGGCGG 498
|||||||||||.||||.||..|||||||.||||||||||||||||.|||.||||||||||||||||||||..||
Sbjct 578 AGCGGCCCATCACTTGCCCTGAATGCGACAGACGCTTCTGGCGACAAAAACAGCTTCGAGCTCATCTGCGAAGG 651
Query 499 TGCCACCCTCCCGCCCCGGAGGCCCGGCCCTTCATATGCGGCAACTGTGGCCGGAGCTTTGCCCAGTGGGACCA 572
|||||.||.||.|.|||.|||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 652 TGCCAGCCCCCTGTCCCTGAGGCCCGGCCCTTCATATGCGGCAACTGTGGCCGGAGCTTTGCCCAATGGGACCA 725
Query 573 GCTAGTTGCCCACAAGCGGGTGCACGTAGCTGAGGCCCTGGAGGAGGCCGCAGCCAAGGCTCTGGGGCCCCGGC 646
.||.||||..|||||||||||||||||.|||||||||.||||||||||.||||||||.||.|||||.||.| ||
Sbjct 726 ACTGGTTGTTCACAAGCGGGTGCACGTGGCTGAGGCCTTGGAGGAGGCAGCAGCCAAAGCCCTGGGTCCTC-GC 798
Query 647 CCA-GGGGCCGCCCCGCGGTGACCGCCCCCCGGCCCGGTGGAGATGCCGTCGACCGCCCCTTCCAGTGTGCCTG 719
||| |.||.||.|||| |.||.|||.||||.||||||||.||.||.|||||||||||||||||||||||
Sbjct 799 CCACGAGGACGTCCCG------CAGCTCCCAGGCCTGGTGGAGACGCTGTGGACCGCCCCTTCCAGTGTGCCTG 866
Query 720 TTGTGGCAAGCGCTTCCGGCACAAGCCCAACTTGATCGCTCACCGCCGCGTGCACACGGGCGAGCGGCCCCACC 793
.||.||||||||.|||||.|||||||||||..|||||||.|||||||||||||||||.||.|||||.||.||||
Sbjct 867 CTGCGGCAAGCGTTTCCGCCACAAGCCCAATCTGATCGCCCACCGCCGCGTGCACACTGGTGAGCGACCACACC 940
Query 794 AGTGCCCCGAGTGCGGGAAGCGCTTTACCAATAAGCCCTATCTGACTTCGCACCGGCGCATCCACACCGGCGAG 867
|||||||.||||||||||||||.||.|||||.||||||||.|||||.||||||||||||||.||.|||||||||
Sbjct 941 AGTGCCCAGAGTGCGGGAAGCGTTTCACCAACAAGCCCTACCTGACCTCGCACCGGCGCATACATACCGGCGAG 1014
Query 868 AAGCCCTACCCGTGCAAAGAGTGCGGCCGCCGCTTCCGGCACAAACCCAACCTGCTGTCTCACAGCAAGATTCA 941
|||||||||||.||||..|||||.||||||||||||||.|||||||||||||||.||||.||||||||.||.||
Sbjct 1015 AAGCCCTACCCATGCACCGAGTGTGGCCGCCGCTTCCGCCACAAACCCAACCTGTTGTCGCACAGCAAAATCCA 1088
Query 942 CAAGCGATCCGAGGGGTCGGCCCAGGCCGCCCCCGGCCCGGGGAGCCCCCAGCTGCCAGCCGGCCCCCAGGAGT 1015
||||||.|..||||..||.||.|||||.|||||...|||.|.|||.|.||||.|
Sbjct 1089 CAAGCGCTTGGAGGTCTCAGCGCAGGCTGCCCCACACCCCGAGAGTCACCAGAT-------------------- 1142
Query 1016 CCGCGGCCGAGCCCACCCCGGCGGTACCTCTGAAACCGGCCCAGGAGCCGCCGCCAGGGG-CCCCGCCAGAGCA 1088
.||.||.|||||.| .||.|| ||||.||.|..|.|..||| ||.|||| ||||||
Sbjct 1143 -TGCAGCAGAGCCTA------TGGCAC------AACCTGCACTTGGGGTGCC-CCTGGGGTCCCCGC------- 1195
Query 1089 CCCGCAGGACCCGATCGAAGCCCCC--CCCTCCCTCTACAGCTGCGACGACTGCGGCAGGAGCTTCCGGCTGGA 1160
||||||.|.|..||.|.|| |.|| |||..|.||||||..||||||||||.|.||||||||||||||
Sbjct 1196 ------GGACCCCAGCTGAGGCACCTGCGCT-CCTGCATAGCTGCTCCGACTGCGGCCGCAGCTTCCGGCTGGA 1262
Query 1161 GCGCTTCCTGCGGGCCCACCAGCGGCAGCACACCGGGGAGCGGCCCTTCACCTGCGCCGAGTGCGGGAAGAACT 1234
|||||||||||||...||||||.||||||||||.||||||.||||||||.|||||.|.|||||.||.|||||||
Sbjct 1263 GCGCTTCCTGCGGCTACACCAGAGGCAGCACACAGGGGAGAGGCCCTTCGCCTGCACAGAGTGTGGCAAGAACT 1336
Query 1235 TCGGCAAGAAGACGCACCTGGTGGCGCACTCGCGCGTGCACTCCGGCGAGCGGCCCTTCGCCTGCGAGGAGTGC 1308
|||||||||||||||||||||||||||||||.|||||||||||||||||.||.||||||||||||||||||||.
Sbjct 1337 TCGGCAAGAAGACGCACCTGGTGGCGCACTCACGCGTGCACTCCGGCGAACGTCCCTTCGCCTGCGAGGAGTGT 1410
Query 1309 GGCCGCCGCTTCTCCCAGGGCAGCCATCTGGCGGCGCATCGGCGCGACCACGCCCCCGATCGGCCCTTCGTGTG 1382
||.|||||.|||||.|||||||||||.|||||.||.||.|||||.|||||.||.||.||..|||||||||||||
Sbjct 1411 GGTCGCCGTTTCTCACAGGGCAGCCACCTGGCAGCCCACCGGCGAGACCATGCACCAGAGAGGCCCTTCGTGTG 1484
Query 1383 TCCCGACTGCGGCAAGGCCTTCCGCCACAAACCCTACCTGGCGGCGCACCGGCGCATCCACACCGGCGAGAAGC 1456
.||.||||||||||||||.|||||||||||.|||||||||||.||||||||.|||||||||||.||||||||.|
Sbjct 1485 CCCGGACTGCGGCAAGGCTTTCCGCCACAAGCCCTACCTGGCTGCGCACCGACGCATCCACACAGGCGAGAAAC 1558
Query 1457 CCTACGTCTGCCCCGACTGCGGCAAAGCCTTCAGCCAGAAGTCCAACCTGGTGTCGCACCGGCGCATCCACACG 1530
||||.||.||.||||||||.||||||||.|||||.||||||||||||||||||||.|||||||||||||||||.
Sbjct 1559 CCTATGTGTGTCCCGACTGTGGCAAAGCTTTCAGTCAGAAGTCCAACCTGGTGTCCCACCGGCGCATCCACACA 1632
Query 1531 GGCGAGCGGCCCTACGCCTGTCCCGACTGCGACCGCAGCTTCAGCCAGAAGTCCAACCTCATCACCCACCGCAA 1604
||||||||||||||||||||.||||||||.||.||.||||||||.|||||||||||.||.|||||.|||||.||
Sbjct 1633 GGCGAGCGGCCCTACGCCTGCCCCGACTGTGATCGTAGCTTCAGTCAGAAGTCCAATCTTATCACACACCGGAA 1706
Query 1605 GAGCCACATCCGGGACGGCGCCTTCTGCTGTGCCATCTGTGGCCAGACCTTCGACGACGAGGAGAGACTCCTGG 1678
|||||||||||||||.|||||||||||.|||||||||||||||||||||||.||.||||||||..|||||.||.
Sbjct 1707 GAGCCACATCCGGGATGGCGCCTTCTGTTGTGCCATCTGTGGCCAGACCTTTGATGACGAGGACCGACTCTTGA 1780
Query 1679 CCCACCAGAAGAAGCACGATGTC 1701
..||||||||||||||.||||.|
Sbjct 1781 TGCACCAGAAGAAGCATGATGCC 1803