Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08191
Subject:
NR_147854.1
Aligned Length:
3378
Identities:
709
Gaps:
2666

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCGGCCGCAGCGCGCATTTGGGCTCCGAGGAAGTTGACCGAGGCGGCTGCCGCAGGATCCCGGGCCCGGATCGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACGAAGCCCGCGCGGCCGTCTCCTCCGCGCGCCACCCCTGCGCCTCCCGCGAGCTCCACTTCCCATCTGCTATT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTTTCCGATTGTTTTCCGGTGGCGAGCCCGGCTCCGAAACTTACAAAGTGTTGGATGTCCCCCGTTCGAACTGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGGACTGCAGACCGCCTCTGGGTAGCTGGATGAAGCCCACCCCGTCCCCTTCTGGTACCAAAGTGCTTACTCCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTCCAAAGTGCCGTGTCTGAACTGCCGCTGGGAAGAAGCGGCTCCTGAGACGCGCCCACACCTTTCACCTGCCG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CGCGCTTCCCCCTCCTCGGCCACCTTCCCGGCGGAAGCAGCGAGGAGGGAGCCCCCTTTGGCCGTCCTCCGTGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AACCGGTTTTCCGAGGCTGGCAAAAGCCGAGGCTGGATTTGGGGGAGGAATATTAGACTCGGAGGAGTCTGCGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCTTTTCTCCTCCCCGCGCCTCCCGGTCGCCGCGGGTTCACCGCTCAGTCCCCGCGCTCGCTCCGCACCCCACC  592

Query    1  ------------------------------------------------------------------------AT  2
                                                                                    ||
Sbjct  593  CACTTCCTGTGCTCGCCCGGGGGGCGTGTGCCGTGCGGCTGCCGGAGTTCGGGGAAGTTGTGGCTGTCGAGAAT  666

Query    3  GGGGGTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTAC  76
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGGGGTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTAC  740

Query   77  CCACAGGAGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGG  150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCACAGGAGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGG  814

Query  151  GAGAGCGCCACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCATCCT  224
            |||||||||||||||                                                           
Sbjct  815  GAGAGCGCCACCCTC-----------------------------------------------------------  829

Query  225  CTATGCTGGGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTACAGCA  298
                                                                                      
Sbjct  830  --------------------------------------------------------------------------  829

Query  299  TCGAGATCCAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCCAAAG  372
                                                                                      
Sbjct  830  --------------------------------------------------------------------------  829

Query  373  ACCTCTAGGGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGA  446
                                      ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  830  --------------------------AGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGA  877

Query  447  AGGGAACAATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTC  520
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  878  AGGGAACAATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTC  951

Query  521  CCAAAGCGGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCCGGGAGCAGTCAGGGGAC  594
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct  952  CCAAAGCGGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCAGGGAGCAGTCAGGGGAC  1025

Query  595  TACGAGTGCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACC  668
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026  TACGAGTGCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACC  1099

Query  669  ATACATTTCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAG  742
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1100  ATACATTTCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAG  1173

Query  743  TCCCCTCAGCAGAATTCCAGTGGTACAAGGATGACAAAAGACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAA  816
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174  TCCCCTCAGCAGAATTCCAGTGGTACAAGGATGACAAAAGACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAA  1247

Query  817  AACAGACCTTTCCTCTCAAAACTCATCTTCTTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGC  890
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1248  AACAGACCTTTCCTCTCAAAACTCATCTTCTTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGC  1321

Query  891  CTCCAACAAGCTGGGCCACACCAATGCCAGCATCATGCTATTTGGT---------------GAGACTGTGCTC-  948
            ||||||||||||||||||||||||||||||||||||||||||||||               |||   |||..| 
Sbjct 1322  CTCCAACAAGCTGGGCCACACCAATGCCAGCATCATGCTATTTGGTCCAGGCGCCGTCAGCGAG---GTGAGCA  1392

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1393  ACGGCACGTCGAGGAGGGCAGGCTGCGTCTGGCTGCTGCCTCTTCTGGTCTTGCACCTGCTTCTCAAATTTTGA  1466

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1467  TGTGAGTGCCACTTCCCCACCCGGGAAAGGCTGCCGCCACCACCACCACCAACACAACAGCAATGGCAACACCG  1540

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1541  ACAGCAACCAATCAGATATATACAAATGAAATTAGAAGAAACACAGCCTCATGGGACAGAAATTTGAGGGAGGG  1614

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1615  GAACAAAGAATACTTTGGGGGGAAAAAAGTTTTAAAAAAGAAATTGAAAATTGCCTTGCAGATATTTAGGTACA  1688

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1689  ATGGAGTTTTCTTTTCCCAAACGGGAAGAACACAGCACACCCGGCTTGGACCCACTGCAAGCTGCATCGTGCAA  1762

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1763  CCTCTTTGGTGCCAGTGTGGGCAAGGGCTCAGCCTCTCTGCCCACAGAGTGCCCCCACGTGGAACATTCTGGAG  1836

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1837  CTGGCCATCCCAAATTCAATCAGTCCATAGAGACGAACAGAATGAGACCTTCCGGCCCAAGCGTGGCGCTGCGG  1910

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1911  GCACTTTGGTAGACTGTGCCACCACGGCGTGTGTTGTGAAACGTGAAATAAAAAGAGCAAGAAAGAAAAAGGAA  1984

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 1985  ACAAAATAAGACCGTCTGACAGCAACAACGGTCCCACAAACAAGTCACAAAAGATACCGTTAAACTTTTTTTTT  2058

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2059  TTTTTATCATTTTACTACATGAACATCATGGATAACAAGGGATTCTGATTCATTATTAATTTCATTAATTATAT  2132

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2133  TTTCTGATATGAGTCTAGAACTTACTGCAAAAACAAGACAAAACTAAAAAAATACAACTGAGAAGGGTGAAGAG  2206

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2207  AAGTATGTTTGTTAAACAGTAAAAATGAATAGTATACTTCTTAACTAGGTTTACAACTGGTGGACCACACACCA  2280

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2281  GGCACTAATCACCTGGTGAGGATTTGGCATATCCACCAAAAAATGCATCCGATTTAACCAACATCTCCACCAGC  2354

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2355  GCTACGGACTCCTCCCAATTCTGACATCTCTTGCAGACAATACTATGCTCTCTACACACTGTTTAGAAATGGAA  2428

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2429  AGGTGATCTGCACTGTATCTTGGGTTTGTTGGCTATGCTTCCTTTGATGACATATATTATACAGTATATATATA  2502

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2503  CATATATTTTTTTTGTTAGAGTTCTAGCCATTTTATTTCTCCGCAGGGTCCTTTCTCAGACATTACTGCATGCT  2576

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2577  GTATATGGCGTTAGCTGTGTGTTGATCTTCTAAAAGATGATAGAGTTTACTGGTAATTGTGTAATCAGCTCCTG  2650

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2651  CCTTTTTATTTTCTTGGGTTATTTACATGTCAGAGACATTTATAAAAAGTGAAAGGATAAAAAAAAAAAAAAAC  2724

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2725  AACTAATACCGGGCGCAGCATCTTTCCAGGTGTGGCTCTGCGCTAGGCCACCCCAGGTGGCCCCGCTTTCTCCA  2798

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2799  TTCTGCCCTGTGGCGTTAACAGACAGCAAGCAGCTGAACAAGCAGTACCGTCAGTACCCACTTGCTTTAGCCCA  2872

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2873  TTATGGGAATCTCTGATGCCTTTGTGACCACTGGAGAGTTTAATCCTCTTGGTTTATTTTATTTCCCACCTTTG  2946

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 2947  TGTGAGTGTGTATGAAAGAGAAGAAAATGCAATTTTTAGGTAATCTTTTTTTTTTTTCCCCTCCCCTGAAAGTC  3020

Query  949  --------------------------------------------------------------------------  948
                                                                                      
Sbjct 3021  TGGGAACCTGAGAGTCCTCGGGGAGGGGTCCTGGATGTGATGAGGGAAAGGGGGATTGGGGGATCCGGGAGGGT  3094

Query  949  ------------------------------------------------  948
                                                            
Sbjct 3095  GGGGTTGTCTCTGACTTGACATTAAAAAGTGTTCCATGTCCCTCTTCA  3142

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