Nucleotide Global Alignment

Description

• Query: ccsbBroad304_08309
• Subject: NM_027949.1
• Aligned Length: 1148
• Identities: 807
• Gaps: 232

Alignment

Query    1  ATGAAGACTGTAAAAGAAAAGAAGGA--ATGCCAGAGATTGAGAAAATCTGCCAAGACTAGGAGGGTAACCCAG  72
            |||||||||.||||||||||.||..|  || ||| ||||||||||||.||..||.|||||.||.||||||.|||
Sbjct    1  ATGAAGACTTTAAAAGAAAAAAACAAACAT-CCA-AGATTGAGAAAAACTATCAGGACTAAGAAGGTAACACAG  72

Query   73  AGGAAACCGTCTTCAGGGCCTGTTTGCTGGCTATGCCTTCGAGAACCTGGGGATCCCGAAAAATTAGGGGAATT  146
            |||||.|.|||||||.|.|||||||||...||||||||||.|||||||||.|||||.||||||.||||.|||||
Sbjct   73  AGGAAGCTGTCTTCAAGTCCTGTTTGCCTTCTATGCCTTCAAGAACCTGGTGATCCTGAAAAACTAGGAGAATT  146

Query  147  TCTTCAGAAAGACAATATCAGCGTGCATTATTTCTGTCTTATCTTATCTAGTAAGCTGCCTCAGAGGGGCCAGT  220
            ||||||||||||||||.|..|.||.||||||||||||||||||.|.|||||.|..||||||||||.||||||..
Sbjct  147  TCTTCAGAAAGACAATCTTTGTGTCCATTATTTCTGTCTTATCCTGTCTAGCAGACTGCCTCAGAAGGGCCAAC  220

Query  221  CCAACAGAGGTTTCCATGGATTTCTGCCTGAAGACATCAAAAAGGAGGCAGCCCGGGCTTCTAGGAAGATCTGC  294
            |||||||||||.|||||||||||.||||||||||||||||||.||||||||..||||||||||.||||||||||
Sbjct  221  CCAACAGAGGTCTCCATGGATTTATGCCTGAAGACATCAAAAGGGAGGCAGTACGGGCTTCTAAGAAGATCTGC  294

Query  295  TTTGTGTGCAAGAAAAAGGGAGCTGCTATCAACTGCCAGAAGGATCAGTGCCT-CAGAAACTTCCATCTGCCTT  367
            |||||.|||||||||||.|||||||||||||..||||||||.||||||||..| ||| ||||||||||||||||
Sbjct  295  TTTGTATGCAAGAAAAAAGGAGCTGCTATCAGATGCCAGAATGATCAGTGTGTCCAG-AACTTCCATCTGCCTT  367

Query  368  GTGGCCAAGAAAGGGGTTGCCTTTCACAATTTTTTGGAGAGTACAAATCATTTTGT-GACAAACATCGCCCAAC  440
            ||||||||||||||||||||||||||||.||||||||||||||||||||||.|||| || ||||||||.|||||
Sbjct  368  GTGGCCAAGAAAGGGGTTGCCTTTCACAGTTTTTTGGAGAGTACAAATCATATTGTAGA-AAACATCGACCAAC  440

Query  441  ACAGAACATCCAACATGGGCATGTGGGGGAGGAAAGCTGCATCTTATGTTGTGAAGACTTATCCC-AACAGAGT  513
            ||||||||||||.||.|||..|.||||||||||||||||..||||.|||||.|||.|.||||||| |||| |||
Sbjct  441  ACAGAACATCCACCAGGGGAGTTTGGGGGAGGAAAGCTGTGTCTTGTGTTGCGAAAATTTATCCCGAACA-AGT  513

Query  514  GTTGAGAACATCCAGAGCCCGTGTTGTAGTCAAGCCATCTACCACCGCAAGTGCATACAGAAATATGCCCACAC  587
            ||||||||||||||||||||.||.|||||||||||.|||||.|||||||||||.||.|||||||||||||||||
Sbjct  514  GTTGAGAACATCCAGAGCCCATGCTGTAGTCAAGCTATCTATCACCGCAAGTGTATCCAGAAATATGCCCACAC  587

Query  588  ATCAGCAAAGCATTTCTTCAAATGTCCACAGTGTAACAATCGAAAAGAGTTTCCTCAAGAAATGCTGAGAATGG  661
            ||||||||||||.||||||||.|||||.|||||.|||||.|||.|||||||.||.||.||.||||||||.||||
Sbjct  588  ATCAGCAAAGCACTTCTTCAAGTGTCCCCAGTGCAACAACCGAGAAGAGTTCCCACAGGAGATGCTGAGGATGG  661

Query  662  GAATTCATATTCCAGACAGAGATGCTGCCTGGGAACTCGAGCCAGGGGCTTTCTCAGACTTATATCAGCGCTAT  735
            |.||.||.||.||||||||||||||||||||||||||||||||||||||||||||.||.||.||||||||||||
Sbjct  662  GGATCCACATCCCAGACAGAGATGCTGCCTGGGAACTCGAGCCAGGGGCTTTCTCCGAGTTGTATCAGCGCTAT  735

Query  736  CAGCACTGTGATGCCCCCATCTGTCTGTATGAACAAGGCAGAGACAGCTTTGAGGATGAAGGGAGGTGGTGCCT  809
            |.|||.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||..|||||.||||
Sbjct  736  CGGCATTGTGATGCCCCCATCTGTCTGTATGAGCAAGGCAGAGACAGCTTTGAGGATGAAGGACGGTGGCGCCT  809

Query  810  CATTCTGTGTGCTACATGCGGATCCCACGGAACCCACAGGGACTGCTCCTCTCTTAGATCTAACAGTAAGAAAT  883
            ||||.||||||||||.||.||||||||.|||||||||.||||||||||||||||||||.|.|||||.|||||||
Sbjct  810  CATTTTGTGTGCTACGTGTGGATCCCATGGAACCCACCGGGACTGCTCCTCTCTTAGACCAAACAGCAAGAAAT  883

Query  884  GGGAGTGTGAGGAGTGTTCACCTGCTGCAGCCACAGACTACATACCTGAAAACTCAGGGGACATCCCTTGCTGC  957
            ||||.|||.|.|||||||..||||||.||.|||| ||.|                                   
Sbjct  884  GGGAATGTAATGAGTGTTTGCCTGCTTCAACCAC-GAGT-----------------------------------  921

Query  958  AGCAGCACCTTCCACCCTGAGGAACATTTCTGCAGAGACAACACCTTGGAAGAGAATCCGGGCCTTTCTTGGAC  1031
                                                                                      
Sbjct  922  --------------------------------------------------------------------------  921

Query 1032  TGATTGGCCAGAACCTTCCTTATTAGAAAAGCCAGAGTCCTCTCGTGGCAGGAGGAGCTACTCCTGGAGGTCCA  1105
                                                                                      
Sbjct  922  --------------------------------------------------------------------------  921

Query 1106  AGGGTGTCAGAATCACTAACAGCTGCAAAAAATCCAAG  1143
                                                  
Sbjct  922  --------------------------------------  921