Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08344
Subject:
NM_001363625.1
Aligned Length:
1278
Identities:
896
Gaps:
333

Alignment

Query    1  ATGAACATGCCCCAGTCCCTG----GG---------------CAA--CCAGCCACTGCCCCCAGAACCGCCATC  53
                  |||.|||||.||.||    ||               |||  ||.|||...||||||||..|||||.||
Sbjct    1  ------ATGGCCCAGCCCTTGTCCCGGCCCCTCGTCCTATCCCAATCCCCGCCTTGGCCCCCAGCCCCGCCCTC  68

Query   54  -------------CCTTGG----AACCCCTGC--GG----------AGG-------------------------  73
                         |.|.||    |.|||||||  ||          |||                         
Sbjct   69  GCCCCGCTTCCCACATCGGCCCCAGCCCCTGCCTGGGTCCCCATCCAGGACCCCCTTCCAGTCTCTGCCCCTGG  142

Query   74  ---------------GGCCTGGGACCACGT----CCCC---------ACCCGAGCACTGCTGGCCAGTGC--GC  117
                           |||||.||.||.|||    ||||         |.||.|||.|.|  |.||.||.|  ||
Sbjct  143  CCTGGCCCCCATCCCGGCCTCGGCCCTCGTTCCACCCCCTGTCACAAATCCCAGCCCAG--GCCCTGTCCCAGC  214

Query  118  CCGACTC--------TGCGCAACGAGCTGG-------------------------------ACA--CCTTC--T  148
            ||.|.||        |||..||.|..||||                               |||  |||||  |
Sbjct  215  CCCATTCCCAGTGTTTGCTTAAGGCCCTGGCTCAACCCCGTCCCTTGCTGCAGTCCCCATCACAGCCCTTCCTT  288

Query  149  C--------------------------------TGTCCA-------------------------CTT----CTA  161
            |                                ||||||                         |||    || 
Sbjct  289  CCATCCCACTCCCTGCCCTTGTTCAAGCCCCAGTGTCCAGCCCAGCCCAACCCATTATCTCAGCCTTTGCCCT-  361

Query  162  CATCTTCT---TTGGCCCAAGTGTGGCCCT----TCCCCCTGA------------------GCGCCCAGCC---  207
            |||| |||   ||..|||||||.|..||||    ||||||..|                  .|.|||||||   
Sbjct  362  CATC-TCTGTGTTTACCCAAGTCTCTCCCTCTAGTCCCCCCTATCTCTCATACTCTGCCCCTCTCCCAGCCTAG  434

Query  208  ----------GTGTT--------CGCCA-------TGAGGCTGTTGCCAGTGCTGGACAGTGGAGGC-GTCCTC  255
                      |.|||        |||||       ||..||||||| |.||.||            | |||||.
Sbjct  435  ACTCAAGTCTGGGTTTCAGCTGCCGCCAGCCCTATTGCTGCTGTTG-CTGTTCT------------CTGTCCTT  495

Query  256  AG-CCTGGAGCTCCAGCTCAATGCGAGCTCCGTGCGCCAGGAAAACGTGACGGTGTTTGGATGCTTGACTCACG  328
            .| ||.||.|||            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  496  GGCCCAGGGGCT------------GAGCTCCGTGCGCCAGGAAAACGTGACGGTGTTTGGATGCTTGACTCACG  557

Query  329  AGGTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGCCGGCTTCCTCCTCTCTGTC  402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  558  AGGTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGCCGGCTTCCTCCTCTCTGTC  631

Query  403  AGTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATTCCCGCAGACGGGGACCTGGTTCCTGGCCCTCCGCTC  476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  632  AGTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATTCCCGCAGACGGGGACCTGGTTCCTGGCCCTCCGCTC  705

Query  477  CCTGTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGGTGTGGATGCGCACCTTCCTGT  550
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  706  CCTGTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGGTGCGGATGCGCACCTTCCTGT  779

Query  551  CCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGCAAGCTGCTGCGCACACACAATTATCTGTACGCAGCC  624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  780  CCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGCAAGCTGCTGCGCACACACAATTATCTGTACGCAGCC  853

Query  625  TGCGAGTGCAAGGCCGGGTGGAGAGGCTGGGGCTGCACCGACAGTGCAGATGCGCTCACCTATGGATTCCAGCT  698
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  854  TGCGAGTGCAAGGCCGGGTGGAGAGGCTGGGGCTGCACCGACAGTGCAGATGCGCTCACCTATGGATTCCAGCT  927

Query  699  GCTGTCCACACTCCTGCTCTGCCTGAGCAACCTCATGTTTCTGCCACCTGTGGTCCTGGCCATTCGGAGTCGAT  772
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  928  GCTGTCCACACTCCTGCTCTGCCTGAGCAACCTCATGTTTCTGCCACCTGTGGTCCTGGCCATTCGGAGTCGAT  1001

Query  773  ATGTGCTGGAAGCTGCAGTCTACACCTTCACCATGTTCTTCTCCACGGTATGCGGTGGTGTCTGCATCTTATCA  846
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1002  ATGTGCTGGAAGCTGCAGTCTACACCTTCACCATGTTCTTCTCCACGGTATGCGGTGGTGTCTGCATCTTATCA  1075

Query  847  CTGGGTGCTTGTGCATGGTGGTGGGTCACAGTCTGTATTTCCACCACGTTCTCCGAGGGTTTGGGAATGTCTGT  920
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076  CTGGGTGCTTGTGCATGGTGGTGGGTCACAGTCTGTATTTCCACCACGTTCTCCGAGGGTTTGGGAATGTCTGT  1149

Query  921  GCCTTCACTGTGTCTTCTACAGACAGAGACAGCAGTGCTTCCCAAACTGTCATGCATAGATAATGGTCATTTTT  994
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
Sbjct 1150  GCCTTCACTGTGTCTTCTACAGACAGAGACAGCAGTGCTTCCCAAACTGTCATGCATAGA--------------  1209

Query  995  GTAAGACACATTGGAGTAAA  1014
                                
Sbjct 1210  --------------------  1209

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