Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08344
- Subject:
- XM_017014805.1
- Aligned Length:
- 2036
- Identities:
- 963
- Gaps:
- 1033
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATCTGGAGGAGGCAACTTGGCAGCCCCAGGAGGACATGCTGGGTCCAGGGTCTCCAGGATGAGTGTCAGTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTCCTTCAGCCGCAGCTGATTGTCCGGCGTTTGCTGGACGTCGCTGTGCTGGTTCCTGGCCGGCCCTCAGAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAACCCTCTCCCCACACAATCGCTCAGCCCTGTACAAGGTCTTTGTGCCCAGCTTCACTTACAGGGTTTCAGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGCTGGTGTGTGTGGGGGGCCGTGGGGTATCTGCCTGCCCCCTGTCACTGCGTCTGCGTCCCAAAGCCCCACC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTGCACAACTCAAGCTCTGTGGCCTGTGGAGGTGCCTCAGGATGCCAGCTGGAGCTGGCACTGCCCCCCTGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCACTGGGTCTACGTGCGTGTGGAAACATCATCCCGGGGCCCTGGTAGGACCATCCGCTTCCAGCTGTGTGTG 444
Query 1 ---------------------------------------------------------ATGAACATGCCCCAGTC 17
|||||||||||||||||
Sbjct 445 CGGTTGCAAGAGTGCCCACAGCCCGGCCTGCTCCGAGCCCTGGTCCCTGGAGCTGCCATGAACATGCCCCAGTC 518
Query 18 CCTGGGCAACCAGCCACTGCCCCCAGAACCGCCATCCCTTGGAACCCCTGCGGAGGGGCCTGGGACCACGTCCC 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCTGGGCAACCAGCCACTGCCCCCAGAACCGCCATCCCTTGGAACCCCTGCGGAGGGGCCTGGGACCACGTCCC 592
Query 92 CACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTTCTCTGTCCACTTCTACATC 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTTCTCTGTCCACTTCTACATC 666
Query 166 TTCTTTGGCCCAAGTGTGGCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATGAGGCTGTTGCCAGTGCTGGA 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTCTTTGGCCCAAGTGTGGCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATGAGGCTGTTGCCAGTGCTGGA 740
Query 240 CAGTGGAGGCGTCCTCAGCCTGGAGCTCCAGCTCAATGC----------------------------------- 278
|||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGTGGAGGCGTCCTCAGCCTGGAGCTCCAGCTCAATGCGTTTTTCTGTTCTGAGAATGGAGGTGAGAGAGCAG 814
Query 279 -------------------------------------------GAGCTCCGTGCGCCAGGAAAACGTGACGGTG 309
|||||||||||||||||||||||||||||||
Sbjct 815 CTTTGGCGTGGAGAGCGCCGGGAGGAATGGGCTGTCCTTGGAAGAGCTCCGTGCGCCAGGAAAACGTGACGGTG 888
Query 310 TTTGGATGCTTGACTCACGAGGTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGC 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTTGGATGCTTGACTCACGAGGTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGC 962
Query 384 CGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATTCCCGCAGACGGGGACCT 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATTCCCGCAGACGGGGACCT 1036
Query 458 GGTTCCTGGCCCTCCGCTCCCTGTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGGTG 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGTTCCTGGCCCTCCGCTCCCTGTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGGTG 1110
Query 532 TGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGCAAGCTGCTGCGCACACA 605
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGCAAGCTGCTGCGCACACA 1184
Query 606 CAATTATCTGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAGGCTGGGGCTGCACCGACAGTGCAGATGCGC 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CAATTATCTGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAGGCTGGGGCTGCACCGACAGTGCAGATGCGC 1258
Query 680 TCACCTATGGATTCCAGCTGCTGTCCACACTCCTGCTCTGCCTGAGCAACCTCATGTTTCTGCCACCTGTGGTC 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCACCTATGGATTCCAGCTGCTGTCCACACTCCTGCTCTGCCTGAGCAACCTCATGTTTCTGCCACCTGTGGTC 1332
Query 754 CTGGCCATTCGGAGTCGATATGTGCTGGAAGCTGCAGTCTACACCTTCACCATGTTCTTCTCCACGGT-----A 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.| |
Sbjct 1333 CTGGCCATTCGGAGTCGATATGTGCTGGAAGCTGCAGTCTACACCTTCACCATGTTCTTCTCCACGTTCTATCA 1406
Query 823 TGC------------------GGTGG-TGTCTGCATCTT--ATCACTGGGTGCT-------TGTG----CATGG 864
||| .|||| |.||||||||.| |..||...||||| |||| |.|||
Sbjct 1407 TGCCTGTGACCAGCCAGGCATCGTGGTTTTCTGCATCATGGACTACGATGTGCTGCAGTTCTGTGATTTCCTGG 1480
Query 865 ---------TG-----GTGGGTCACAGTCTGTATTTCCA--CCACGTTCT-----CCGAG--------GGT--- 906
|| |||||||||.||| |||.||| .|.|||| | |||.| |||
Sbjct 1481 GCTCCTTAATGTCCGTGTGGGTCACTGTC---ATTGCCATGGCTCGTT-TACAGCCCGTGGTCAAGCAGGTGCT 1550
Query 907 -------TTGGGA---------------ATGTCTGTGC--CTT------------------------------C 926
.||||| |||.||.||| ||| |
Sbjct 1551 GTATTTGCTGGGAGCTATGCTGCTGTCCATGGCTCTGCAGCTTGACCGACATGGACTCTGGAACCTGCTTGGAC 1624
Query 927 ACTGTGTCTT-----------------CTACAGACAGAGACAGCAG----------------TGCTTCCCA--- 964
.|.||.|||| |.||||.|.|..|| |||| ||||.||||
Sbjct 1625 CCAGTCTCTTCGCCCTGGGGATCTTGGCCACAGCCTGGTAC-GCAGCGTCCGCCGCCGGCACTGCTACCCACCC 1697
Query 965 -----------------------------AACTGTCA-------TGCATAGATAATG--GTCAT---------T 991
..|||.|| ||| ||..|.|| |||.| |
Sbjct 1698 ACGTGGCGCCGCTGGCTTTTCTACTTGTGCCCTGGCAGCCTTATTGC--AGGCAGTGCCGTCCTGCTTTATGCT 1769
Query 992 TTTGT-AAGACACATTGGAGTAAA-------------------------------------------------- 1014
||||| .||||.| |.|..||
Sbjct 1770 TTTGTGGAGACCC----GGGACAACTACTTCTACATTCACAGCATTTGGCATATGCTCATTGCGGGCAGTGTGG 1839
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1840 GCTTCCTGCTGCCCCCTCGTGCCAAGACTGACCACGGGGTCCCATCTGGAGCCCGGGCCCGGGGCTGTGGTTAC 1913
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1914 CAGCTATGCATCAACGAGCAGGAGGAGCTGGGCCTCGTGGGCCCAGGAGGGGCCACTGTCAGCAGCATCTGTGC 1987
Query 1015 -------------------------------------- 1014
Sbjct 1988 CAGCTGAGAGGGGCTTTGGGCCTGGCCCTGAGGGGATA 2025
