Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08344
Subject:
XM_017014805.1
Aligned Length:
2036
Identities:
963
Gaps:
1033

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGATCTGGAGGAGGCAACTTGGCAGCCCCAGGAGGACATGCTGGGTCCAGGGTCTCCAGGATGAGTGTCAGTA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCTCCTTCAGCCGCAGCTGATTGTCCGGCGTTTGCTGGACGTCGCTGTGCTGGTTCCTGGCCGGCCCTCAGAGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAACCCTCTCCCCACACAATCGCTCAGCCCTGTACAAGGTCTTTGTGCCCAGCTTCACTTACAGGGTTTCAGCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAGCTGGTGTGTGTGGGGGGCCGTGGGGTATCTGCCTGCCCCCTGTCACTGCGTCTGCGTCCCAAAGCCCCACC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCTGCACAACTCAAGCTCTGTGGCCTGTGGAGGTGCCTCAGGATGCCAGCTGGAGCTGGCACTGCCCCCCTGGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGCACTGGGTCTACGTGCGTGTGGAAACATCATCCCGGGGCCCTGGTAGGACCATCCGCTTCCAGCTGTGTGTG  444

Query    1  ---------------------------------------------------------ATGAACATGCCCCAGTC  17
                                                                     |||||||||||||||||
Sbjct  445  CGGTTGCAAGAGTGCCCACAGCCCGGCCTGCTCCGAGCCCTGGTCCCTGGAGCTGCCATGAACATGCCCCAGTC  518

Query   18  CCTGGGCAACCAGCCACTGCCCCCAGAACCGCCATCCCTTGGAACCCCTGCGGAGGGGCCTGGGACCACGTCCC  91
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCTGGGCAACCAGCCACTGCCCCCAGAACCGCCATCCCTTGGAACCCCTGCGGAGGGGCCTGGGACCACGTCCC  592

Query   92  CACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTTCTCTGTCCACTTCTACATC  165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTTCTCTGTCCACTTCTACATC  666

Query  166  TTCTTTGGCCCAAGTGTGGCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATGAGGCTGTTGCCAGTGCTGGA  239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TTCTTTGGCCCAAGTGTGGCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATGAGGCTGTTGCCAGTGCTGGA  740

Query  240  CAGTGGAGGCGTCCTCAGCCTGGAGCTCCAGCTCAATGC-----------------------------------  278
            |||||||||||||||||||||||||||||||||||||||                                   
Sbjct  741  CAGTGGAGGCGTCCTCAGCCTGGAGCTCCAGCTCAATGCGTTTTTCTGTTCTGAGAATGGAGGTGAGAGAGCAG  814

Query  279  -------------------------------------------GAGCTCCGTGCGCCAGGAAAACGTGACGGTG  309
                                                       |||||||||||||||||||||||||||||||
Sbjct  815  CTTTGGCGTGGAGAGCGCCGGGAGGAATGGGCTGTCCTTGGAAGAGCTCCGTGCGCCAGGAAAACGTGACGGTG  888

Query  310  TTTGGATGCTTGACTCACGAGGTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGC  383
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TTTGGATGCTTGACTCACGAGGTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGC  962

Query  384  CGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATTCCCGCAGACGGGGACCT  457
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATTCCCGCAGACGGGGACCT  1036

Query  458  GGTTCCTGGCCCTCCGCTCCCTGTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGGTG  531
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GGTTCCTGGCCCTCCGCTCCCTGTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGGTG  1110

Query  532  TGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGCAAGCTGCTGCGCACACA  605
            .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGCAAGCTGCTGCGCACACA  1184

Query  606  CAATTATCTGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAGGCTGGGGCTGCACCGACAGTGCAGATGCGC  679
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CAATTATCTGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAGGCTGGGGCTGCACCGACAGTGCAGATGCGC  1258

Query  680  TCACCTATGGATTCCAGCTGCTGTCCACACTCCTGCTCTGCCTGAGCAACCTCATGTTTCTGCCACCTGTGGTC  753
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TCACCTATGGATTCCAGCTGCTGTCCACACTCCTGCTCTGCCTGAGCAACCTCATGTTTCTGCCACCTGTGGTC  1332

Query  754  CTGGCCATTCGGAGTCGATATGTGCTGGAAGCTGCAGTCTACACCTTCACCATGTTCTTCTCCACGGT-----A  822
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|     |
Sbjct 1333  CTGGCCATTCGGAGTCGATATGTGCTGGAAGCTGCAGTCTACACCTTCACCATGTTCTTCTCCACGTTCTATCA  1406

Query  823  TGC------------------GGTGG-TGTCTGCATCTT--ATCACTGGGTGCT-------TGTG----CATGG  864
            |||                  .|||| |.||||||||.|  |..||...|||||       ||||    |.|||
Sbjct 1407  TGCCTGTGACCAGCCAGGCATCGTGGTTTTCTGCATCATGGACTACGATGTGCTGCAGTTCTGTGATTTCCTGG  1480

Query  865  ---------TG-----GTGGGTCACAGTCTGTATTTCCA--CCACGTTCT-----CCGAG--------GGT---  906
                     ||     |||||||||.|||   |||.|||  .|.|||| |     |||.|        |||   
Sbjct 1481  GCTCCTTAATGTCCGTGTGGGTCACTGTC---ATTGCCATGGCTCGTT-TACAGCCCGTGGTCAAGCAGGTGCT  1550

Query  907  -------TTGGGA---------------ATGTCTGTGC--CTT------------------------------C  926
                   .|||||               |||.||.|||  |||                              |
Sbjct 1551  GTATTTGCTGGGAGCTATGCTGCTGTCCATGGCTCTGCAGCTTGACCGACATGGACTCTGGAACCTGCTTGGAC  1624

Query  927  ACTGTGTCTT-----------------CTACAGACAGAGACAGCAG----------------TGCTTCCCA---  964
            .|.||.||||                 |.||||.|.|..|| ||||                ||||.||||   
Sbjct 1625  CCAGTCTCTTCGCCCTGGGGATCTTGGCCACAGCCTGGTAC-GCAGCGTCCGCCGCCGGCACTGCTACCCACCC  1697

Query  965  -----------------------------AACTGTCA-------TGCATAGATAATG--GTCAT---------T  991
                                         ..|||.||       |||  ||..|.||  |||.|         |
Sbjct 1698  ACGTGGCGCCGCTGGCTTTTCTACTTGTGCCCTGGCAGCCTTATTGC--AGGCAGTGCCGTCCTGCTTTATGCT  1769

Query  992  TTTGT-AAGACACATTGGAGTAAA--------------------------------------------------  1014
            ||||| .||||.|    |.|..||                                                  
Sbjct 1770  TTTGTGGAGACCC----GGGACAACTACTTCTACATTCACAGCATTTGGCATATGCTCATTGCGGGCAGTGTGG  1839

Query 1015  --------------------------------------------------------------------------  1014
                                                                                      
Sbjct 1840  GCTTCCTGCTGCCCCCTCGTGCCAAGACTGACCACGGGGTCCCATCTGGAGCCCGGGCCCGGGGCTGTGGTTAC  1913

Query 1015  --------------------------------------------------------------------------  1014
                                                                                      
Sbjct 1914  CAGCTATGCATCAACGAGCAGGAGGAGCTGGGCCTCGTGGGCCCAGGAGGGGCCACTGTCAGCAGCATCTGTGC  1987

Query 1015  --------------------------------------  1014
                                                  
Sbjct 1988  CAGCTGAGAGGGGCTTTGGGCCTGGCCCTGAGGGGATA  2025

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