Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08437
- Subject:
- XM_011248445.1
- Aligned Length:
- 1535
- Identities:
- 716
- Gaps:
- 721
Alignment
Query 1 ATGATGTCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGTTGT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TTTGGAGAATCATGTAGTGACAGATGAAGACGAACCTGCTTTGAAACGCCAGCGACTAGAAATCAATTGCCAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATCCATCTATAAAGTCATTCCTGTATTCCATCAACCAGACAATCTGCTTGCGGTTGGATAGCATTGAAGCCAAA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TTGCAAGCCCTGGAGGCTACTTGTAAATCCTTAGAAGAAAAGCTGGATCTGGTCACGAACAAGCAGCACAGCCC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CATCCAGGTCCCCATGGTGGCCGGCTCCCCTCTCGGGGCAACCCAGACGTGCAACAAAGTGCGATGCGCTGTGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGAGAGC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GGCTCGGAGGCCAGCGACTCTGTGTCCAGCTGTGGGCAGGCGGGCAGTCAGAGCATCGGGAGCAACGTCACGCT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CATCACCCTGAACTCGGAAGAGGACTACCCCAATGGCACCTGGCTGGGCGACGAGAACAACCCCGAGATGCGGG 592
|||||||
Sbjct 1 -------------------------------------------------------------------ATGCGGG 7
Query 593 TACGCTGCGCCATCATCCCCTCCGACATGCTGCACATCAGCACCAACTGCCGCACGGCTGAGAAGATGGCGCTA 666
|||||||.|||||||||||.|||||||||.|||||||||||||||||||.||||||||.||||||||||||||.
Sbjct 8 TACGCTGTGCCATCATCCCTTCCGACATGTTGCACATCAGCACCAACTGTCGCACGGCCGAGAAGATGGCGCTG 81
Query 667 ACGCTGCTGGACTACCTCTTCCACCGCGAGGTGCAGGCTGTGTCCAACCTCTCGGGGCAGGGCAAGCACGGGAA 740
||.||||||||||||||.||||||||.|||||||||||||||||||||.|.||.||.|||||||||||||||||
Sbjct 82 ACACTGCTGGACTACCTGTTCCACCGTGAGGTGCAGGCTGTGTCCAACTTGTCCGGCCAGGGCAAGCACGGGAA 155
Query 741 GAAGCAGCTGGACCCGCTCACCATCTACGGCATCCGGTGTCACCTTTTCTATAAATTTGGCATCACAGAATCCG 814
|||||||||||||||.|||||||||||||||||||||||||||||.||||||||||||||.|||||.|||||.|
Sbjct 156 GAAGCAGCTGGACCCCCTCACCATCTACGGCATCCGGTGTCACCTCTTCTATAAATTTGGAATCACGGAATCTG 229
Query 815 ACTGGTACCGAATCAAGCAGAGCATCGACTCCAAGTGCCGCACGGCGTGGCGGCGCAAGCAGCGGGGCCAGAGC 888
|||||||.||.||||||||||||||.||||||||||||||.||.||.||||||||.||||||||.|||||||||
Sbjct 230 ACTGGTATCGGATCAAGCAGAGCATTGACTCCAAGTGCCGGACAGCCTGGCGGCGGAAGCAGCGAGGCCAGAGC 303
Query 889 CTGGCGGTCAAGAGCTTCTCGCGGAGAACGCCCAACTCGTCCTCCTAC--TGCCCTTCAGAGCCGATGATGAGC 960
||||||||||||||||||||.|||||.|||||...|||.|||||.||| |||| ||||||.|.||||||.|.
Sbjct 304 CTGGCGGTCAAGAGCTTCTCTCGGAGGACGCCATCCTCATCCTCTTACAGTGCC--TCAGAGACCATGATGGGA 375
Query 961 ACCCCACCTCCTGCCAGCGAGCTCCCGCAGCCACAGCCGCAGCCGCAGGCCCTGCACTACGCGCTGGCCAACGC 1034
|||||.|||||..||||.|||||.|.||||.|| |||||.||||||||.||||||||.|||||||||||
Sbjct 376 ACCCCTCCTCCCACCAGTGAGCTACAGCAGTCA------CAGCCACAGGCCCTACACTACGCCCTGGCCAACGC 443
Query 1035 ACAGCAGGTGCAGATCCACCAGATCGGAGAAGACGGACAGGTGCAAGTAATCCCACAGGGACACCTCCACATCG 1108
.||||||||.||||||||||||||.||.||.||.||||||||||||||||||||||||||.|||||||||||.|
Sbjct 444 CCAGCAGGTCCAGATCCACCAGATTGGGGAGGATGGACAGGTGCAAGTAATCCCACAGGGCCACCTCCACATTG 517
Query 1109 CCCAGGTGCCGCAGGGGGAGCAAGTCCAGATCACGCAGGACAGCGAGGGCAACCTCCAGATCCATCACGTGGGG 1182
||||||||||.||.||||||||.||.||||||||.|||||||||||||||||.||.|||||||||||.|||||.
Sbjct 518 CCCAGGTGCCTCAAGGGGAGCAGGTGCAGATCACACAGGACAGCGAGGGCAATCTGCAGATCCATCATGTGGGT 591
Query 1183 CAGGA------------------------------------------CGGT----------------------- 1191
||||| ||||
Sbjct 592 CAGGATGGCCAGTCGTGGGGCCTGTGCCAGAATCCCATTCCTGTCAGCGGTGACTCAGTGGCCCAGGCTAATCC 665
Query 1192 -------------------------------------------------------------CAGGTGCTGCAGG 1204
|||||.|||||||
Sbjct 666 CTCCCAGCTTTGGCCTCTGGGAGGAGACACACTTGATCTGCCTGCTGGAAATGAAATGATCCAGGTACTGCAGG 739
Query 1205 GTGCACAGCTGATCGCCGTGGCCTCCTCGGACCCCGCGGCGGCGGGCGTGGATGGGTCGCCACTCCAGGGCAGC 1278
||||.|||||.||.|||||||||||.||.|||||.||.||..|.||.||.|||||||||||.|||||||||||.
Sbjct 740 GTGCTCAGCTCATAGCCGTGGCCTCTTCAGACCCTGCTGCTACAGGAGTAGATGGGTCGCCTCTCCAGGGCAGT 813
Query 1279 GACATCCAGGTTCAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACGGCCGGGGCACAGACGGCCGAAGCCCT 1352
|||||.|||||||||||.||.|||||||||||.||||||||||||||.||||..||.|||||.||.||.|||||
Sbjct 814 GACATTCAGGTTCAGTATGTCCAGCTGGCGCCTGTGAGTGACCACACAGCCGCAGCGCAGACCGCAGAGGCCCT 887
Query 1353 GCAGCCCACGCTACAGCCGGAGATGCAGCTCGAGCACGGGGCCATCCAGATTCAG 1407
|||||||||.||.|||||.||.||||||||.||.||.||||||||||||||.|||
Sbjct 888 GCAGCCCACTCTGCAGCCCGACATGCAGCTTGAACATGGGGCCATCCAGATCCAG 942
