Nucleotide Global Alignment

Description

• Query: ccsbBroad304_08437
• Subject: XM_017023382.1
• Aligned Length: 1478
• Identities: 922
• Gaps: 535

Alignment

Query    1  ATGATGTCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGTTGT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TTTGGAGAATCATGTAGTGACAGATGAAGACGAACCTGCTTTGAAACGCCAGCGACTAGAAATCAATTGCCAGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATCCATCTATAAAGTCATTCCTGTATTCCATCAACCAGACAATCTGCTTGCGGTTGGATAGCATTGAAGCCAAA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TTGCAAGCCCTGGAGGCTACTTGTAAATCCTTAGAAGAAAAGCTGGATCTGGTCACGAACAAGCAGCACAGCCC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CATCCAGGTCCCCATGGTGGCCGGCTCCCCTCTCGGGGCAACCCAGACGTGCAACAAAGTGCGATGCG----CT  366
                                                                           ||| |    ||
Sbjct    1  ---------------------------------------------------------------ATG-GAATCCT  10

Query  367  GTGCCTGGGCGTCGGCAGAACAC-CATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGG  439
            ||           ||||..||.| ||||||                                            
Sbjct   11  GT-----------GGCATCACCCACATTGT--------------------------------------------  29

Query  440  AGAGCGGCTCGGAGGCCAGCGACTCTGTGTCCAGCTGTGGGCAGGCGGGCAGTCAGAGCATCGGGAGCAACGTC  513
              |||...|    |.||||.|   ||.|||.|  ||.|              |||..||..||.|    |.||.
Sbjct   30  --AGCTTTT----GCCCAGTG---CTTTGTTC--CTTT--------------TCATGGCTGCGTG----ATGTG  74

Query  514  ACGCTCATCACCCTGAACTCGGAAGAGGACTACCCCAATGGCACCTGGCTGGGCGACGAGAACAACCCCGAGAT  587
            .||                    |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCG--------------------AGAGGACTACCCCAATGGCACCTGGCTGGGCGACGAGAACAACCCCGAGAT  128

Query  588  GCGGGTACGCTGCGCCATCATCCCCTCCGACATGCTGCACATCAGCACCAACTGCCGCACGGCTGAGAAGATGG  661
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct  129  GCGGGTACGCTGCGCCATCATCCCCTCCGACATGCTGCACATCAGCACCAACTGCCGCACGGCCGAGAAGATGG  202

Query  662  CGCTAACGCTGCTGGACTACCTCTTCCACCGCGAGGTGCAGGCTGTGTCCAACCTCTCGGGGCAGGGCAAGCAC  735
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  203  CGCTCACGCTGCTGGACTACCTCTTCCACCGCGAGGTGCAGGCTGTGTCCAACCTCTCGGGGCAGGGCAAGCAC  276

Query  736  GGGAAGAAGCAGCTGGACCCGCTCACCATCTACGGCATCCGGTGTCACCTTTTCTATAAATTTGGCATCACAGA  809
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  277  GGGAAGAAGCAGCTGGACCCGCTCACCATCTACGGCATCCGGTGTCACCTTTTCTATAAATTTGGCATCACAGA  350

Query  810  ATCCGACTGGTACCGAATCAAGCAGAGCATCGACTCCAAGTGCCGCACGGCGTGGCGGCGCAAGCAGCGGGGCC  883
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  351  ATCCGACTGGTACCGAATCAAGCAGAGCATCGACTCCAAGTGCCGCACGGCGTGGCGGCGCAAGCAGCGGGGCC  424

Query  884  AGAGCCTGGCGGTCAAGAGCTTCTCGCGGAGAACGCCCAACTCGTCCTCCTACTGCCCTTCAGAGCCGATGATG  957
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  425  AGAGCCTGGCGGTCAAGAGCTTCTCGCGGAGAACGCCCAACTCGTCCTCCTACTGCCCTTCAGAGCCGATGATG  498

Query  958  AGCACCCCACCTCCTGCCAGCGAGCTCCCGCAGCCACAGCCGCAGCCGCAGGCCCTGCACTACGCGCTGGCCAA  1031
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  499  AGCACCCCACCTCCTGCCAGCGAGCTCCCGCAGCCACAGCCGCAGCCGCAGGCCCTGCACTACGCGCTGGCCAA  572

Query 1032  CGCACAGCAGGTGCAGATCCACCAGATCGGAGAAGACGGACAGGTGCAAGTAATCCCACAGGGACACCTCCACA  1105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  573  CGCACAGCAGGTGCAGATCCACCAGATCGGAGAAGACGGACAGGTGCAAGTAATCCCACAGGGACACCTCCACA  646

Query 1106  TCGCCCAGGTGCCGCAGGGGGAGCAAGTCCAGATCACGCAGGACAGCGAGGGCAACCTCCAGATCCATCACGTG  1179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  647  TCGCCCAGGTGCCGCAGGGGGAGCAAGTCCAGATCACGCAGGACAGCGAGGGCAACCTCCAGATCCATCACGTG  720

Query 1180  GGGCAGGACGGT--------------------------------------------------------------  1191
            ||||||||||||                                                              
Sbjct  721  GGGCAGGACGGTCAGCTTCTAGAGGCCACCCGCATCCCCTGCCTCCTGGCCCCATCCGTCTTCAAAGCCAGCAG  794

Query 1192  ----CAGGTGCTGCAGGGTGCACAGCTGATCGCCGTGGCCTCCTCGGACCCCGCGGCGGCGGGCGTGGATGGGT  1261
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  795  TGGCCAGGTGCTGCAGGGTGCACAGCTGATCGCCGTGGCCTCCTCGGACCCCGCGGCGGCGGGCGTGGATGGGT  868

Query 1262  CGCCACTCCAGGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACGGCCGGGGCA  1335
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  869  CGCCACTCCAGGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACGGCCGGGGCA  942

Query 1336  CAGACGGCCGAAGCCCTGCAGCCCACGCTACAGCCGGAGATGCAGCTCGAGCACGGGGCCATCCAGATTCAG  1407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  943  CAGACGGCCGAAGCCCTGCAGCCCACGCTACAGCCGGAGATGCAGCTCGAGCACGGGGCCATCCAGATTCAG  1014