Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08529
- Subject:
- XM_017008376.1
- Aligned Length:
- 1265
- Identities:
- 631
- Gaps:
- 601
Alignment
Query 1 ATGGGCGGGAACCTCTCCCACAAGCCCCCCGTGTTTGACGAGAATGAGGAAGTCAACTTTGACCATTTTCAGAT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TCTGCGGGCCATTGGTAAAGGGAGTTTTGGAAAGGTATGCATCGTGCAGAAGCGAGACACTAAGAAAATGTATG 148
|||||||
Sbjct 1 -------------------------------------------------------------------ATGTATG 7
Query 149 CAATGAAGTACATGAACAAGCAGAAGTGCATCGAGAGGGATGAGGTTCGGAATGTTTTCCGGGAGCTGCAGATC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8 CAATGAAGTACATGAACAAGCAGAAGTGCATCGAGAGGGATGAGGTTCGGAATGTTTTCCGGGAGCTGCAGATC 81
Query 223 ATGCAAGGGCTGGAGCACCCCTTCCTGGTCAATCTGTGGTACTCCTTCCAGGATGAGGAGGACATGTTCATGGT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 82 ATGCAAGGGCTGGAGCACCCCTTCCTGGTCAATCTGTGGTACTCCTTCCAGGATGAGGAGGACATGTTCATGGT 155
Query 297 GGTGGACCTGCTCCTGGGAGGCGACCTGCGCTACCATCTGCAGCAGAATGTGCATTTCACAGAGGGGACTGTGA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 156 GGTGGACCTGCTCCTGGGAGGCGACCTGCGCTACCATCTGCAGCAGAATGTGCATTTCACAGAGGGGACTGTGA 229
Query 371 AACTCTACATCTGTGAGCTGGCACTGGCCCTGGAGTATCTTCAGAGGTACCACATCATCCACAGAGACATCAAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 230 AACTCTACATCTGTGAGCTGGCACTGGCCCTGGAGTATCTTCAGAGGTACCACATCATCCACAGAGACATCAAG 303
Query 445 CCAGACAATATCCTGCTGGATGAACACGGACATGTTCACATTACAGACTTCAACATAGCGACGGTAGTGAAAGG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 304 CCAGACAATATCCTGCTGGATGAACACGGACATGTTCACATTACAGACTTCAACATAGCGACGGTAGTGAAAGG 377
Query 519 AGCAGAAAGGGCTTCCTCCATGGCTGGCACCAAGCCCTACATGGCTCCAGAAGTATTCCAGGTGTACATGGACG 592
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 378 AGCAGAAAGGGCTTCCTCCATGGCTGGCACCAAGCCCTACATGGCTCCAGAAGTATTCCAGGTGTACATGGACA 451
Query 593 GAGGCCCCGGATACTCGTACCCTGTCGACTGGTGGTCCCTGGGCATCACAGCCTATGAGCTGCTGCGGGGCTGG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 452 GAGGCCCCGGATACTCGTACCCTGTCGACTGGTGGTCCCTGGGCATCACAGCCTATGAGCTGCTGCGGGGCTGG 525
Query 667 ----AGGCCGTACGAAATCCACTCGGTCACGCCCATCGATGAAATCCTCAACATGTTCAAGG-TGGAGCGTGTC 735
..||.|.| |.||||| |||| || ||.||||||| |||.||.|.|
Sbjct 526 TTTTCTGCTGAA--AGATCCA----------------GATG-----CT----ATTTTCAAGGATGGTGCTTCT- 571
Query 736 CACTACTCCTCCACGTGGTGCAAGGGGATGGTGGCCCTGCTGAGGAAGCTCCTGACCAAGGATCCTGAGAGCCG 809
||.|||.| ||.|||||...|||....||||||.|
Sbjct 572 ------------------TGGAAGAG---------------GAAGAAGCAAATGATGGGGGATCCAG------- 605
Query 810 CGTGTCCAGCCTTCATGACAT----ACAGAGCGTGCCCTACTTGGCCGACATGAA----------CTGGGACGC 869
||||| ||.||| |||.|| ||.| |..||||| |||..|||.
Sbjct 606 --------GCCTT--TGGCATGGAGACAAAG-------TAAT-----GGAATGAAAGAACACCACCTGTTACGT 657
Query 870 GGTGTTCAAGAAGGCACTG---ATGCCCGGCTTTGTGCCCA-ATAAAGGGAGGTTGAACTGCGATCCCACATTT 939
..| |||| || ||||.| |||| |||.| ||
Sbjct 658 ACT------------ACTGTAAAT------CTTTCT-CCCAGATATA------TT------------------- 687
Query 940 GAGCTTGAAGAGATGATTCTAGAATCCAAGCCACTTCACAAAAAGAAGAAGCGATTGGCAAAGAACAGATCCAG 1013
Sbjct 688 -------------------------------------------------------------------------- 687
Query 1014 GGATGGCACAAAGGACAGCTGCCCGCTGAATGGACACCTGCAGCACTGTTTGGAGACTGTCCGGGAGGAATTCA 1087
Sbjct 688 -------------------------------------------------------------------------- 687
Query 1088 TCATATTCAACAGAGAGAAGCTCAGGAGGCAGCAGGGACAGGGCAGCCAGCTCTTGGACACCGACAGCCGAGGG 1161
Sbjct 688 -------------------------------------------------------------------------- 687
Query 1162 GGAGGCCAGGCCCAAAGCAAGCTCCAGGACGGGTGCAACAACAACCTCCTCACCCACACCTGCACCCGTGGCTG 1235
Sbjct 688 -------------------------------------------------------------------------- 687
Query 1236 CAGCAGC 1242
Sbjct 688 ------- 687
