Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08568
Subject:
NM_001300750.1
Aligned Length:
1500
Identities:
1394
Gaps:
81

Alignment

Query    1  ATGG---------AAGC---------ACCTGACTACGAAGTGCTATCCGTGCGAG-AACAGCTATTCCACGAGA  55
            ||||         ||||         ||||      |||||           ||| |||.|||           
Sbjct    1  ATGGTTAATGTGAAAGCCCTTTGTGAACCT------GAAGT-----------GAGCAACTGCT-----------  46

Query   56  GGATCCGCGAGTGT-ATTATATCAACA--CTTCTGTTTGCAACACTGTACATCCTCTGCCACATCTTCC-----  121
            ||||    ||.||| ||||.....|||  | |||||.| ||.|        ||||||.|.|...|||||     
Sbjct   47  GGAT----GAATGTCATTACGGGCACAGGC-TCTGTGT-CATC--------TCCTCTCCTAGTGCTTCCACAGC  106

Query  122  --TGACCCG----CTTCAAGAAGCCTGCTGAGTTCACCACAGTGGATGATGAAGATGCCACCGTCAACAAGATT  189
              .||||.|    ||.|..||.|.|||..||    ||  |.|||||||||||||||||||||||||||||||||
Sbjct  107  CAGGACCAGAGACCTCCCTGATGACTGGGGA----AC--CTGTGGATGATGAAGATGCCACCGTCAACAAGATT  174

Query  190  GCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCTGTCCTGCTCCTGCCCTTCTCCATCATCAG  263
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  175  GCGCTCGAGCTGTGCACCTTTACCCTGGCAATTGCCCTGGGTGCTGTCCTGCTCCTGCCCTTCTCCATCATCAG  248

Query  264  CAATGAGGTGCTGCTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTCT  337
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  249  CAATGAGGTGCTGCTCTCCCTGCCTCGGAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTCT  322

Query  338  GGAACCTTGTTTTTCTCTTCTCCAACCTGTCCCTCATCTTCCTCATGCCCTTTGCATATTTCTTCACTGAGTCT  411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  323  GGAACCTTGTTTTTCTCTTCTCCAACCTGTCCCTCATCTTCCTCATGCCCTTTGCATATTTCTTCACTGAGTCT  396

Query  412  GAGGGCTTTGCTGGCTCCAGAAAGGGTGTCCTGGGCCGGGTCTATGAGACAGTGGTGATGTTGATGCTCCTCAC  485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  397  GAGGGCTTTGCTGGCTCCAGAAAGGGTGTCCTGGGCCGGGTCTATGAGACAGTGGTGATGTTGATGCTCCTCAC  470

Query  486  TCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGAGTCACTCT  559
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  471  TCTGCTGGTGCTAGGTATGGTGTGGGTGGCATCAGCCATTGTGGACAAGAACAAGGCCAACAGAGAGTCACTCT  544

Query  560  ATGACTTTTGGGAGTACTATCTCCCCTACCTCTACTCATGCATCTCCTTCCTTGGGGTTCTGCTGCTCCTGGTG  633
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  545  ATGACTTTTGGGAGTACTATCTCCCCTACCTCTACTCATGCATCTCCTTCCTTGGGGTTCTGCTGCTCCTGGTG  618

Query  634  TGTACTCCACTGGGTCTCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCTAGTCAAGCCCCGGCTGCTGGAAGA  707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  619  TGTACTCCACTGGGTCTCGCCCGCATGTTCTCCGTCACTGGGAAGCTGCTAGTCAAGCCCCGGCTGCTGGAAGA  692

Query  708  CCTGGAGGAGCAGCTGTACTGCTCAGCCTTTGAGGAGGCAGCCCTGACCCGCAGGATCTGTAATCCTACTTCCT  781
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  693  CCTGGAGGAGCAGCTGTACTGCTCAGCCTTTGAGGAGGCAGCCCTGACCCGCAGGATCTGTAATCCTACTTCCT  766

Query  782  GCTGGCTGCCTTTAGACATGGAGCTGCTACACAGACAGGTCCTGGCTCTGCAGACACAGAGGGTCCTGCTGGAG  855
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  767  GCTGGCTGCCTTTAGACATGGAGCTGCTACACAGACAGGTCCTGGCTCTGCAGACACAGAGGGTCCTGCTGGAG  840

Query  856  AAGAGGCGGAAGGCTTCAGCCTGGCAACGGAACCTGGGCTACCCCCTGGCTATGCTGTGCTTGCTGGTGCTGAC  929
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  841  AAGAGGCGGAAGGCTTCAGCCTGGCAACGGAACCTGGGCTACCCCCTGGCTATGCTGTGCTTGCTGGTGCTGAC  914

Query  930  GGGCCTGTCTGTTCTCATTGTGGCCATCCACATCCTGGAGCTGCTCATCGATGAGGCTGCCATGCCCCGAGGCA  1003
            ||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  915  GGGCCTGTCTGTGCTCATTGTGGCCATCCACATCCTGGAGCTGCTCATCGATGAGGCTGCCATGCCCCGAGGCA  988

Query 1004  TGCAGGGTACCTCCTTAGGCCAGGTCTCCTTCTCCAAGCTGGGCTCCTTTGGTGCCGTCATTCAGGTTGTACTC  1077
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  989  TGCAGGGTACCTCCTTAGGCCAGGTCTCCTTCTCCAAGCTGGGCTCCTTTGGTGCCGTCATTCAGGTTGTACTC  1062

Query 1078  ATCTTTTACCTAATGGTGTCCTCAGTTGTGGGCTTCTATAGCTCTCCACTCTTCCGGAGCCTGCGGCCCAGATG  1151
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1063  ATCTTTTACCTAATGGTGTCCTCAGTTGTGGGCTTCTATAGCTCTCCACTCTTCCGGAGCCTGCGGCCCAGATG  1136

Query 1152  GCACGACACTGCCATGACGCAGATAATTGGGAACTGTGTCTGTCTCCTGGTCCTAAGCTCAGCACTTCCTGTCT  1225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1137  GCACGACACTGCCATGACGCAGATAATTGGGAACTGTGTCTGTCTCCTGGTCCTAAGCTCAGCACTTCCTGTCT  1210

Query 1226  TCTCTCGAACCCTGGGGCTCACTCGCTTTGACCTGCTGGGTGACTTTGGACGCTTCAACTGGCTGGGCAATTTC  1299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1211  TCTCTCGAACCCTGGGGCTCACTCGCTTTGACCTGCTGGGTGACTTTGGACGCTTCAACTGGCTGGGCAATTTC  1284

Query 1300  TACATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTCACCACACTCTGTCTGGTGAAGACCTTCACTGCAGC  1373
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1285  TACATTGTGTTCCTCTACAACGCAGCCTTTGCAGGCCTCACCACACTCTGTCTGGTGAAGACCTTCACTGCAGC  1358

Query 1374  TGTGCGGGCAGAGCTGATCCGGGCCTTTGGGCTGGACAGACTGCCGCTGCCCGTCTCCGGTTTCCCCCAGGCAT  1447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1359  TGTGCGGGCAGAGCTGATCCGGGCCTTTGGGCTGGACAGACTGCCGCTGCCCGTCTCCGGTTTCCCCCAGGCAT  1432

Query 1448  CTAGGAAGACCCAGCACCAG  1467
            ||||||||||||||||||||
Sbjct 1433  CTAGGAAGACCCAGCACCAG  1452

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