Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08826
- Subject:
- XR_001747177.2
- Aligned Length:
- 3995
- Identities:
- 764
- Gaps:
- 3194
Alignment
Query 1 ----------------------------------------ATGGCACCGTGGGGCAAGCGGCTGGCTGGCGTGC 34
||||||||||||||||||||||||||||||||||
Sbjct 1 GTCGGTTGGGACGCGGAGCTGAGGAGCAGGGCCGGGCGCCATGGCACCGTGGGGCAAGCGGCTGGCTGGCGTGC 74
Query 35 GCGGGGTGCTGCTTGACATCTCGGGCGTGCTGTACGACAGCGGCGCGGGCGGCGGCACGGCCATCGCCGGCTCG 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCGGGGTGCTGCTTGACATCTCGGGCGTGCTGTACGACAGCGGCGCGGGCGGCGGCACGGCCATCGCCGGCTCG 148
Query 109 GTGGAGGCGGTGGCCAGACTGAAGCGTTCCCGGCTGAAGGTGAGGTTCTGCACCAACGAGTCGCAGAAGTCCCG 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTGGAGGCGGTGGCCAGACTGAAGCGTTCCCGGCTGAAGGTGAGGTTCTGCACCAACGAGTCGCAGAAGTCCCG 222
Query 183 GGCAGAGCTGGTGGGGCAGCTTCAGAGGCTGGGATTTGACATCTCTGAGCAGGAGGTGACCGCCCCGGCACCAG 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGCAGAGCTGGTGGGGCAGCTTCAGAGGCTGGGATTTGACATCTCTGAGCAGGAGGTGACCGCCCCGGCACCAG 296
Query 257 CTGCCTGCCAGATCCTGAAGGAGCGAGGCCTGCGACCATACCTGCTCATCCATGACGGAGTCCGCTCAGAATTT 330
||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTGCCTGCCAGATCCTGAAGGAGCAAGGCCTGCGACCATACCTGCTCATCCATGACGGAGTCCGCTCAGAATTT 370
Query 331 GATCAGATCGACACATCCAACCCAAACTGTGTGGTAATTGCAGACGCAGGAGAAAGCTTTTCTTATCAAAACAT 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GATCAGATCGACACATCCAACCCAAACTGTGTGGTAATTGCAGACGCAGGAGAAAGCTTTTCTTATCAAAACAT 444
Query 405 GAATAACGCCTTCCAGGTGCTCATGGAGCTGGAAAAACCTGTGCTCATATCACTGGGAAAAGGGCGTTACTACA 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAATAACGCCTTCCAGGTGCTCATGGAGCTGGAAAAACCTGTGCTCATATCACTGGGAAAAGGGCGTTACTACA 518
Query 479 AGGAGACCTCTGGCCTGATGCTGGACGTTGGTCCCTACATGAAGGCGCTTGAGTATGCCTGTGGCATCAAAGCC 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGGAGACCTCTGGCCTGATGCTGGACGTTGGTCCCTACATGAAGGCGCTTGAGTATGCCTGTGGCATCAAAGCC 592
Query 553 GAGGTGGTGGGGAAGCCTTCTCCTGAGTTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGAAGCCCACCAGG- 625
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAGGTGGTGGGGAAGCCTTCTCCTGAGTTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGAAGCCCACCAGGG 666
Query 626 -------------------------------------------------------------------------- 625
Sbjct 667 GACAGCTGTCTTTGTGCTTATTGAAGCACTTTAACGAAGCAGTTTTCACAGCTGCATACTATTCCACTGTTCAG 740
Query 626 ----CCGTCATGATTGGGGACGA-----TATCGTGGGCGACGTCGGCGGTGC--CCAG---CG-----GTGTGG 680
||||||| |||...|||.| |||.|..||.||.| .||| ||| |||| || |||.|.
Sbjct 741 ACTCCCGTCAT-ATTCTTGACCATTTCCTATTGATGGAGATG-AGGC--TGCTTCCAGTTTCGCTCTTGTGCGT 810
Query 681 AA---TGA-GAGC------------------------------------GCTG------CAGGTGC-------- 700
|| ||| ||.| |||| |||.|||
Sbjct 811 AACCCTGATGAACACATCTTAAAGGTGTGTCCGTTCACCTTCCTGACCTGCTGCGTATACAGATGCTTGTTTCC 884
Query 701 --------------GCACCGGGA--------------------------------AGTT--------------- 713
.||||..|| ||||
Sbjct 885 CCACATCCTTACCAACACCATGATTTCTGACTTTTTTTTTTTAAAGTGGTCTTTGAGTTTTGCTGTTAGTCTTG 958
Query 714 ---------CAGG--------CCCAGTGACGA------------GCAC-------------------------- 732
.||| |.|||||.|.| ||||
Sbjct 959 TTCCTTATGAAGGTGTCCGACCACAGTGGCAATTACTCAGCATTGCACTGTCTCCAGGTCTCTGTGGGAGCCTG 1032
Query 733 ----------------------------CATCCGGAAGTGA-----------AGG--------CTGATGGGTAC 759
|||||...||||| ||| |||..||.||.
Sbjct 1033 GGTTCCTTTGGGGCCTGGATTCAGGGCTCATCCTAGAGTGAGCTGTCATCTCAGGGCATCTCCCTGGGGGATAT 1106
Query 760 GTGGACAACCTCGCAGAG--GCAGT----------------------------------GGACCTGCTGCT--- 794
|||.|| |.||||| ||||| .|.|||||||||
Sbjct 1107 GTGCAC-----CCCAGAGCTGCAGTTACAGACACTGAGCTCACTCCACCTTCACCACCCAGCCCTGCTGCTTCC 1175
Query 795 ----------------GCAGCACGCC--GACAAG---------------------------------------- 810
||||..|.|| ||.|||
Sbjct 1176 CGCCCTAATCCTCCTGGCAGAGCCCCTGGATAAGGAAAATATTTGTGAACCACGGAAGCTCTTTGGTGCTGGAA 1249
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1250 TTTTGCACTCCAAAGCATCGCCGCCTGTTAGATGATGTTTCCCTCCAGCACCTAGGACACTGAAGAGGAGACCA 1323
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1324 GGGCAGGCAGGCAGATGCGTAAGAGGGAGGATTGACTGCTGTAGCACCCGACCCAGGACACCTGCCTCTGGGAC 1397
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1398 TGTGGCGCCTCCATCCGGCTCTCTGGATCCTGGGTTCTGGGGGGTCCGACCTTTCATTTTTTTCTCCGCCTCAC 1471
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1472 ACCCCACCATGTCGTGTCTGAAAGGAAGCGAAGCCCAGCCCTGGCAGGTGGAGTATTTTTATTTCCCCTGACAG 1545
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1546 CGCACCTCCTGACCTCTATCTTCTTGCCAGTGATTTTTTAAATCCTAAATGATTTGGCAATAATTGCTCCTCCT 1619
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1620 TGCGTGATTATTGCCCTTCACCGATAGTAAATCTGGGAATCCCCTGGGGTCCTGAGCGCACTTTGGTATGCGGA 1693
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1694 GCCCACAAGCTGGCCTGGACAGGCATCACTGCTCCAGGCAGCTGTGCACCCAGCCGGCCCTGGCGTCCCGGCCC 1767
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1768 CCAGCCTCCGCCTCCCTCGCCGACAGCTTCCCGGGGCTCTGCCTGGAGGCAGCCTCGCTTTATCCCGCAGAACC 1841
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1842 TCCACGCTGTTCCTGCATGAGAACTCTTCCTCCAAGAGACCACGTTCCTCTGGTCCTGTCTCCGTGGGCCACAT 1915
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1916 CCACAAATGTTCCAGCCCAGGAAGAACCAAGTCTGTATTCTGGGAGGGAAACCTGTGTGCTGTCTGGTTTTGTA 1989
Query 811 -------------------------------------------------------------------------- 810
Sbjct 1990 TGTGGGAGGAGCATGCACACAGTTTCATTTTCCCCGGAAGCATGGAGGTGTAGGATGACATGTAATATTTGGAA 2063
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2064 GACCCATTGCATTTCCAAGGAACCTTCTAGCAGGATGGCCCTGGAGTCTCTGGCAGCAGTGGACATGGTCCTGA 2137
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2138 ATTGGAGTGCTGTGAATGTTCACTGCTGACCTCACGGTTTGAAGACAATTCCTTGAGAAGGGCAGAGGGGACCC 2211
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2212 GAATACGGGGGCTCTGGCCGGCCCTGCTGCCAGATGCCAGCAGCCGTGGGGGCTTGCCCGGCCAGCCCTGGCTT 2285
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2286 TTCCCAACCCTCAGAGTGCCCCTTGTGCATGCAGCAGACACTGGTGCTGGTCCCATTCCCGGGAGCACGCGGTG 2359
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2360 CCACTGGCTGTGTCTTGCCTGGCCAGGTGTTGGTTTGATAGACTCGAAAACCTCATTTGGATTTGGCAGGATTT 2433
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2434 TCCCTAACATCAGTCATTCTGGAAAAAACACTTTGAATTTTTACCATATCTGGGTATTTTTACCATATCTGGGT 2507
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2508 ACTTGCCACTAGCTCTATTTACTTCACGTTTCTTAAAATTGATTCATTTTATTACTTAAATAAATGTATTTTAA 2581
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2582 AAGGAACTTTTGATGACTACTATAAATGGAAAACCAGAATCTCTCACTTACCATAATAGATTAATCTAAAAATA 2655
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2656 AAGACCACATGATTACATTAAAATGTATGTCCTTGCTCTGCCTGGAGTCAAATAGTATGTCACCCGTGTGCATG 2729
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2730 ACACACTCTGGGAAGCACAGGGGTGGGTGGAGGAAAGATCAGAGAAAATCCGTGGAAAGTATGAAGTAGAGAGC 2803
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2804 ACCACACCAGGAAGACGTGGTTTTATTTCAGTACCTCATGTCTCGCGGTGGCTTGCGGCTACCAGTAACTGGCA 2877
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2878 GAATTCTCAACATTGTGGCCCTCAGCCACCTCCTCCGAGCTCTCTCTCAGCACCACCATCCGCCGTGGCTTCTC 2951
Query 811 -------------------------------------------------------------------------- 810
Sbjct 2952 TGAGGGAGGCCCCTCTGGCCTCTGCTTGACTATGATACATGTCGAGTCCATGCCGAGTGGCAGAAAAGCTCCGT 3025
Query 811 -------------------------------------------------------------------------- 810
Sbjct 3026 TTTCAGCTGAAACTACCTCCCTGGCCTCAGGGGGCCTCATTGGCTCTGTCTTTGTACTTTCTCAATGGCTCCTG 3099
Query 811 -------------------------------------------------------------------------- 810
Sbjct 3100 ATGATTCCTTGGTTATCTGAAGGCCTGTTTGGGAGACGGTTCCCAGGACAGTTGCTTCAGGCTTATATGTGTGT 3173
Query 811 -------------------------------------------------------------------------- 810
Sbjct 3174 GCTTTCTGGAATTCACAGCATGGCGTGCCCTGGTGAGTGGTGGGGAGATGGGTAGTGAACACGTGTGGTAGCCC 3247
Query 811 -------------------------------------------------------------------------- 810
Sbjct 3248 CTGCTGGGCGTGTCCCACCTGTCCTCCATGTCCTACAACCTGGTTGGCCCCTTTTGCTTGTCAGAGCAAAGCTC 3321
Query 811 -------------------------------------------------------------------------- 810
Sbjct 3322 AGAACCTCACCTCCTCTGGGAGGCCTTTCCTGACCACCCACAAGCCCAGTAGGTCAGGAGGTCAGGCCTCACAG 3395
Query 811 -------------------------------------------------------------------------- 810
Sbjct 3396 CCTCCTGTGTGTTATCCCAGGCCCTGATGATGAGACTGTGGAATTACCTGATTAATGTCTGTCTTTAGCACTTG 3469
Query 811 -------------------------------------------------------------------------- 810
Sbjct 3470 TCGTGAGCTCCGTAAGTGCTGGGACTGCATGTGTCTGATTCACACTGTGTGCCCACTGCCTGGCCTGGCACTGG 3543
Query 811 -------------------------------------------------------------------------- 810
Sbjct 3544 CCTGCGAAGGCCTAGGGCAAAGGTATCAAGTAACCAGGGCAAGGGTGCCTGTTGCAGGTCGGGGGCCTCTCTGA 3617
Query 811 -------------------------------------------------------------------------- 810
Sbjct 3618 TGTGGTGAGATAGGGAATTTCCTCAACGAAACATTTCCTCATGTTTCTGTTTCCTTTGTAACATGTTTAGGCCG 3691
Query 811 -------------------------------------------------------------------------- 810
Sbjct 3692 GGCGCGGTGGCTCACACCTGTAATTCCAGCACTTTGGGAGGCTGAGGCAGGTGGATGACTTGGTCAGGAGATCA 3765
Query 811 -------------------------------------------------------------------------- 810
Sbjct 3766 AGACCATCTTGGTTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAACAAACAGCGGGGCATGGTGGCAG 3839
Query 811 -------------------------------------------------------------------------- 810
Sbjct 3840 CCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTG 3913
Query 811 ------------------------------------------------------------------------- 810
Sbjct 3914 AGCCGAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGAGCGGGACTCCGTCTCAAAAAAAAAAAAAAAAAA 3986
