Construct: ORF ccsbBroad304_08826

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010198.1_s304c1, BRDN0000401418
Derived from:
ccsbBroadEn_08826
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LHPP (64077)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08826
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 64077 LHPP phospholysine phosphohistid... NM_022126.4 99.8% 99.6% 281A>G
2 human 64077 LHPP phospholysine phosphohistid... XM_024448122.1 91.5% 90.7% (many diffs)
3 human 64077 LHPP phospholysine phosphohistid... XM_017016511.1 89.5% 88.5% (many diffs)
4 human 64077 LHPP phospholysine phosphohistid... XM_005270026.4 86.9% 84.3% (many diffs)
5 human 64077 LHPP phospholysine phosphohistid... XM_017016510.1 82.1% 81.3% (many diffs)
6 human 64077 LHPP phospholysine phosphohistid... XM_011540058.3 79% 76.8% (many diffs)
7 human 64077 LHPP phospholysine phosphohistid... NM_001167880.2 77.5% 77% 281A>G;627_628insGT;630_630delGins179
8 human 64077 LHPP phospholysine phosphohistid... NM_001318332.2 77.3% 76.6% (many diffs)
9 human 64077 LHPP phospholysine phosphohistid... NM_001318331.2 69.1% 68.8% 281A>G;466_467ins249
10 human 64077 LHPP phospholysine phosphohistid... XM_017016509.1 64.4% 59.2% (many diffs)
11 human 64077 LHPP phospholysine phosphohistid... XR_001747177.2 19.1% (many diffs)
12 mouse 76429 Lhpp phospholysine phosphohistid... NM_029609.1 84.5% 88.5% (many diffs)
13 mouse 76429 Lhpp phospholysine phosphohistid... XM_006508297.1 49.8% 53.3% (many diffs)
14 mouse 76429 Lhpp phospholysine phosphohistid... XM_006508298.3 48.8% 51.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
879
ORF length:
810
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggcaccgtgg ggcaagcggc tggctggcgt gcgcggggtg ctgcttgaca
121tctcgggcgt gctgtacgac agcggcgcgg gcggcggcac ggccatcgcc ggctcggtgg
181aggcggtggc cagactgaag cgttcccggc tgaaggtgag gttctgcacc aacgagtcgc
241agaagtcccg ggcagagctg gtggggcagc ttcagaggct gggatttgac atctctgagc
301aggaggtgac cgccccggca ccagctgcct gccagatcct gaaggagcga ggcctgcgac
361catacctgct catccatgac ggagtccgct cagaatttga tcagatcgac acatccaacc
421caaactgtgt ggtaattgca gacgcaggag aaagcttttc ttatcaaaac atgaataacg
481ccttccaggt gctcatggag ctggaaaaac ctgtgctcat atcactggga aaagggcgtt
541actacaagga gacctctggc ctgatgctgg acgttggtcc ctacatgaag gcgcttgagt
601atgcctgtgg catcaaagcc gaggtggtgg ggaagccttc tcctgagttt ttcaagtctg
661ccctgcaagc gataggagtg gaagcccacc aggccgtcat gattggggac gatatcgtgg
721gcgacgtcgg cggtgcccag cggtgtggaa tgagagcgct gcaggtgcgc accgggaagt
781tcaggcccag tgacgagcac catccggaag tgaaggctga tgggtacgtg gacaacctcg
841cagaggcagt ggacctgctg ctgcagcacg ccgacaagtt gccaactttc ttgtacaaag
901tggttggtaa gcctatccct aaccctctcc tcggtctcga ttctacgtag taatgagcta
961gcgctaaccg gtggcgcgtt aagtcgacaa tcaacctctg gatta

Download FASTA (ORF) (Full)