Nucleotide Global Alignment

Description

• Query: ccsbBroad304_08862
• Subject: XM_011544254.2
• Aligned Length: 1301
• Identities: 820
• Gaps: 460

Alignment

Query    1  ATGGAGCCGCTGAAGGTGGAAAAGTTCGCAACCGCCAACAGGGGAAACGGGCTGCGCGCCGTGACCCCGCTGCG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCCCGGAGAGCTACTCTTCCGCTCGGATCCCTTGGCGTACACGGTGTGCAAGGGGAGTCGTGGCGTCGTCTGCG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ACCGCTGCCTTCTCGGGAAGGAAAAGCTGATGCGATGCTCTCAGTGCCGCGTCGCCAAATACTGTAGTGCTAAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TGTCAGAAAAAAGCTTGGCCAGACCACAAGCGGGAATGCAAATGCCTTAAAAGCTGCAAACCCAGATATCCTCC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AGACTCCGTTCGACTTCTTGGCAGAGTTGTCTTCAAACTTATGGATGGAGCACCTTCAGAATCAGAGAAGCTTT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  ACTCAT-TTTATGATCTGGAGTCAAATATTAACAAACTGACTGAAGA--TAGGAAAGAGGGCCTCAGGC-AACT  440
                || |||| ||..||||..|    ||.|.|.|.|| |||.||||  |           ||||...| ||.|
Sbjct    1  ----ATGTTTA-GACGTGGATGC----ATCAGCCATCT-ACTTAAGAATT-----------CCTCTTTCGAATT  53

Query  441  CGTAATGACATTTCAACATTTCATGAGAGAAGAAATACAGGATGCCTCTCAGCTGCCACCTGCCTTTGACCTTT  514
            |.|     |.|||..|||         ||||||                             ||||||   |||
Sbjct   54  CTT-----CCTTTGCACA---------AGAAGA-----------------------------CCTTTG---TTT  81

Query  515  TTGAAGCCTTTGCAAAA-------------GTGATCTGCAACTCTTTCACCATCTGTAATGCGGAGATGCAGGA  575
            .|.||.||      |||             ||||||||||||||||||||||||||||||||||||||||||||
Sbjct   82  CTTAACCC------AAAGAAGACGAGCTCTGTGATCTGCAACTCTTTCACCATCTGTAATGCGGAGATGCAGGA  149

Query  576  AGTTGGTGTTGGCCTATATCCCAGTATCTCTTTGCTCAATCACAGCTGTGACCCCAACTGTTCGATTGTGTTCA  649
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  150  AGTTGGTGTTGGCCTATATCCCAGTATCTCTTTGCTCAATCACAGCTGTGACCCCAACTGTTCGATTGTGTTCA  223

Query  650  ATGGGCCCCACCTCTTACTGCGAGCAGTCCGAGACATCGAGGTGGGAGAGGAGCTCACCATCTGCTACCTGGAT  723
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  224  ATGGGCCCCACCTCTTACTGCGAGCAGTCCGAGACATCGAGGTGGGAGAGGAGCTCACCATCTGCTACCTGGAT  297

Query  724  ATGCTGATGACCAGTGAGGAGCGCCGGAAGCAGCTGAGGGACCAGTACTGCTTTGAATGTGACTGTTTCCGTTG  797
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  298  ATGCTGATGACCAGTGAGGAGCGCCGGAAGCAGCTGAGGGACCAGTACTGCTTTGAATGTGACTGTTTCCGTTG  371

Query  798  CCAAACCCAGGACAAGGATGCTGATATGCTAACTGGTGATGAGCAAGTATGGAAGGAAGTTCAAGAATCCCTGA  871
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  372  CCAAACCCAGGACAAGGATGCTGATATGCTAACTGGTGATGAGCAAGTATGGAAGGAAGTTCAAGAATCCCTGA  445

Query  872  AAAAAATTGAAGAACTGAAGGCACACTGGAAGTGGGAGCAGGTTCTGGCCATGTGCCAGGCGATCATAAGCAGC  945
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct  446  AAAAAATTGAAGAACTGAAGGCACACTGGAAGTGGGAGCAGGTTCTGGCCATGTGCCAGGCAATCATAAGCAGC  519

Query  946  AATTCTGAACGGCTTCCCGATATCAACATCTACCAGCTGAAGGTGCTCGACTGCGCCATGGATGCCTGCATCAA  1019
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  520  AATTCTGAACGGCTTCCCGATATCAACATCTACCAGCTGAAGGTGCTCGACTGCGCCATGGATGCCTGCATCAA  593

Query 1020  CCTCGGCCTGTTGGAGGAAGCCTTGTTCTATGGTACTCGGACCATGGAGCCATACAGGATTTTTTTCCCAGGAA  1093
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  594  CCTCGGCCTGTTGGAGGAAGCCTTGTTCTATGGTACTCGGACCATGGAGCCATACAGGATTTTTTTCCCAGGAA  667

Query 1094  GCCATCCCGTCAGAGGGGTTCAAGTGATGAAAGTTGGCAAACTGCAGCTACATCAAGGCATGTTTCCCCAAGCA  1167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  668  GCCATCCCGTCAGAGGGGTTCAAGTGATGAAAGTTGGCAAACTGCAGCTACATCAAGGCATGTTTCCCCAAGCA  741

Query 1168  ATGAAGAATCTGAGACTGGCTTTTGATATTATGAGAGTGACACATGGCAGAGAACACAGCCTGATTGAAGATTT  1241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  742  ATGAAGAATCTGAGACTGGCTTTTGATATTATGAGAGTGACACATGGCAGAGAACACAGCCTGATTGAAGATTT  815

Query 1242  GATTCTACTTTTAGAAGAATGCGACGCCAACATCAGAGCATCC  1284
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct  816  GATTCTACTTTTAGAAGAATGCGACGCCAACATCAGAGCATCC  858