Nucleotide Global Alignment

Description

Query:
ccsbBroad304_08879
Subject:
XM_006505029.2
Aligned Length:
2807
Identities:
2058
Gaps:
520

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCCTGTGCAGCCGTCGCCGCCCGCTGCCGCCAGTGACCCGGTGACCCCGGAGGCCCGTCTGGGCCCGGTGAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCCGGAGCCCCGGGCATCCGGACCCCCGTCACAGGCGCAGCCGCTATTAAGGCAGGAGGCTACCAGGGAGGAGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAGGGGAGGAGACAGGCGGCCAGGGCGCCTGGGGCACCGGCACGGCTGAGCAACGGCGGCGGGGTTGGGGGGAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCCGACGAGGGCACGGGGAAGGCCGGCGGCACGGAGGCCGCAGGCTCGGACCCCTCGGCCCGCGGTTCGGGCGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CGGGCAAGGGAGCTGGCGGCCGCTTCTCGGCTGGCTACGGCGCCCGCCGCCCCAGTGCTGCCCCTGCGCGGCGC  370

Query    1  --------------------------------------------ATGGCGGCTCTGGCCTACAACCTGGGCAAG  30
                                                        ||||||||||||||||||||||||||||||
Sbjct  371  CCCTTCCCCGCTCCGCCGCGCACTGTTGTCATGGAGGAACCAAGATGGCGGCTCTGGCCTACAACCTGGGCAAG  444

Query   31  CGGGAGATCAACCACTACTTCAGCGTGAGGAGCGCCAAGGTGCTGGCGCTGGTGGCCGTGCTGCTGCTCGCAGC  104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CGGGAGATCAACCACTACTTCAGCGTGAGGAGCGCCAAGGTGCTGGCGCTGGTGGCCGTGCTGCTGCTCGCAGC  518

Query  105  GTGCCACCTCGCCTCCCGCCGCTACCGAGGCAATGATTCGTGTGAATACCTTCTCTCAAGTGGCAGATTTCTTG  178
            ||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||
Sbjct  519  GTGCCACCTCGCGTCCCGCCGCTACCGAGGCAATGATTCGTGTGAATACCTTCTCTCGAGCGGCAGATTTCTTG  592

Query  179  GAGAGAAAGTTTGGCAACCTCACAGTTGTATGATGCATAAATACAAAATCAGTGAAGCAAAGAACTGCCTTGTA  252
            ||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||..|||||||||
Sbjct  593  GAGAAAAAGTTTGGCAACCTCACAGTTGTATGATGCATAAATACAAAATAAGTGAAGCAAAGACTTGCCTTGTA  666

Query  253  GATAAACATATTGCATTTATTGGAGATTCCAGAATTCGTCAATTGTTTTATTCTTTTGTAAAAATAATTAATCC  326
            ||||||||.|||||.|||||||||||||||||.||.||||||||.||||||||||||||||||||.|||||.||
Sbjct  667  GATAAACACATTGCGTTTATTGGAGATTCCAGGATCCGTCAATTATTTTATTCTTTTGTAAAAATCATTAACCC  740

Query  327  CCAATTCAAAGAAGAAGGAAATAAGCATGAAAACATTCCTTTTGAAGACAAGACTGCATCAGTTAAAGTGGATT  400
            |||.||.|||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct  741  CCAGTTTAAAGAAGAAGGAAATAAGCATGAAAACATTCCTTTTGAAGACAAGGCTGCATCAGTTAAAGTGGATT  814

Query  401  TTCTGTGGCATCCTGAAGTTAATGGTTCTATGAAACAGTGTATCAAAGTGTGGACTGAGGATTCCATTGCAAAG  474
            ||||.||||||||.||||||||||||||.||||||||.||||||||.||||||||||||||.||..||...|||
Sbjct  815  TTCTTTGGCATCCAGAAGTTAATGGTTCCATGAAACAATGTATCAAGGTGTGGACTGAGGACTCGGTTTTGAAG  888

Query  475  CCACATGTGATTGTAGCAGGAGCTGCCACATGGTCCATCAAGATTCACAATGGTAGC-AGTGAAGCGCTTTCTC  547
            ||.||||||||||||||||||||.|||||||||||||||||||||||.|||||.||| || ||.||.||..|||
Sbjct  889  CCCCATGTGATTGTAGCAGGAGCAGCCACATGGTCCATCAAGATTCATAATGGCAGCGAG-GAGGCACTAGCTC  961

Query  548  AATATAAAATGAACATCACCTCCATAGCACCACTTTTAGAAAAATTGGCAAAGACTAGTGATGTTTATTGGGTC  621
            |.|||||||||||.||||||||||||||||||||.||||||||||||||.||||||||||||||||||||||||
Sbjct  962  AGTATAAAATGAATATCACCTCCATAGCACCACTCTTAGAAAAATTGGCCAAGACTAGTGATGTTTATTGGGTC  1035

Query  622  TTACAAGATCCTGTTTATGAAGATCTATTAAGTGAAAATAGGAAGATGATCACTAATGAGAAGATAGATGCTTA  695
            ||||||||.||.||||||||.|||||.|||||||||||||||||.|||||.||.||||||||||||||.||.||
Sbjct 1036  TTACAAGACCCAGTTTATGAGGATCTCTTAAGTGAAAATAGGAAAATGATTACCAATGAGAAGATAGACGCCTA  1109

Query  696  CAATGAAGCTGCAGTCAGTATTTTGAATAGTAGCACCAGAAATTCTAAATCAAATGTTAAGATGTTCAGTGTTT  769
            ||||||.|||||||||||.||..||||.||.||||||||.|..|||||.||.|||||.||||||||||||||||
Sbjct 1110  CAATGAGGCTGCAGTCAGCATCCTGAACAGCAGCACCAGGACCTCTAAGTCCAATGTGAAGATGTTCAGTGTTT  1183

Query  770  CCAAATTAATTGCTCAAGAAACCATCATGGAATCTTTGGATGGCTTACATCTTCCTGAATCGAGCAGAGAAACT  843
            |||||.|.|||||.|||||.|||||||||||.|||.|||||||||||||.||||||||||||||||||||||||
Sbjct 1184  CCAAACTCATTGCCCAAGAGACCATCATGGAGTCTCTGGATGGCTTACACCTTCCTGAATCGAGCAGAGAAACT  1257

Query  844  ACTGCAATGATTCTTATGAATGTGTATTGCAATAAGATTTTGAAGCCTGTAGATGGGTCCTGTTGTCAACCTCG  917
            |.||||||||||||.|||||.|||||.||||||||..||.||||||||||.|||||.|||||||||||.|||||
Sbjct 1258  AGTGCAATGATTCTCATGAACGTGTACTGCAATAAAGTTGTGAAGCCTGTGGATGGTTCCTGTTGTCAGCCTCG  1331

Query  918  GCCTCCTGTTACTCTCATACAGAAGCTAGCTGCTTGTTTTTTCACTTTATCTATTATCGGATATTTAATTTTTT  991
            |||.|||.|.||||||||.|||||||||||||||||.||||||||||||||.|||||.||.|||||.|||||.|
Sbjct 1332  GCCACCTCTCACTCTCATTCAGAAGCTAGCTGCTTGCTTTTTCACTTTATCCATTATTGGGTATTTCATTTTCT  1405

Query  992  ACATAATTCATCGTAATGCTCATCGGAAGAATAAGCCGTGTACTGATTTGGAAAGTGGAGAGGAAAAGAAAAAT  1065
            |..|||||||||||||||||||.|||||||||||.||.||||||||||||||.|||||.|||||||||||.|||
Sbjct 1406  ATGTAATTCATCGTAATGCTCACCGGAAGAATAAACCATGTACTGATTTGGAGAGTGGCGAGGAAAAGAAGAAT  1479

Query 1066  ATTATCAATACCCCTGTGTCTTCATTAGAAATACTTTTACAATCTTTCTGCAAACTTGGCCTGATTATGGCATA  1139
            |||||||||||.|||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||.||
Sbjct 1480  ATTATCAATACTCCTGTGTCTTCATTAGAAATACTTTTACAGTCTTTTTGCAAACTTGGCCTGATTATGGCTTA  1553

Query 1140  TTTCTATATGTGTGACAGTGCAAATCTGTTCATGAAGGAAAACAAATTTTATACACATTCATCTTTCTTTATTC  1213
            ||||||||||||||||.|||||||.|||||.||||||||||||||||||||||||||||||||.||||||||||
Sbjct 1554  TTTCTATATGTGTGACCGTGCAAACCTGTTTATGAAGGAAAACAAATTTTATACACATTCATCATTCTTTATTC  1627

Query 1214  CAATTATCTACATTTTGGTTTTGGGAGTATTTTATAATGAAAATACTAAAGAGACTAAAGTATTAAATAGAGAA  1287
            |||||||||||||.||||||||||||||||||||.||||||||.||.||||||||||||||.|||||||||||.
Sbjct 1628  CAATTATCTACATCTTGGTTTTGGGAGTATTTTACAATGAAAACACAAAAGAGACTAAAGTGTTAAATAGAGAG  1701

Query 1288  CAAACAGACGAATGGAAAGGCTGGATGCAACTTGTGATTTTGATTTATCACATTTCTGGAGCAAGTACATTTTT  1361
            |||||.||.||||||||||||||||||||.||||||||||||||.||||||||.||.||||||||.||||||.|
Sbjct 1702  CAAACTGATGAATGGAAAGGCTGGATGCAGCTTGTGATTTTGATCTATCACATCTCGGGAGCAAGCACATTTCT  1775

Query 1362  GCCTGTATACATGCACATTCGAGTTCTGGTTGCTGCATATTTATTTCAGACAGGGTATGGGCATTTCTCATACT  1435
            ||||||.|||||||||||||||||||||||.|||||||||.|.||||||||||||||.|||||||||||.||||
Sbjct 1776  GCCTGTGTACATGCACATTCGAGTTCTGGTGGCTGCATATCTGTTTCAGACAGGGTACGGGCATTTCTCTTACT  1849

Query 1436  TTTGGATAAAAGGAGATTTTGGAATCTACAGAGTATGTCAGGTTTTATTTCGTCTCAATTTCCTGGTAGTGGTG  1509
            |||||||.||||||||||||||.||..|.|||||.||||||||.|||||||||||||||||||||||.||||||
Sbjct 1850  TTTGGATCAAAGGAGATTTTGGGATTCATAGAGTGTGTCAGGTCTTATTTCGTCTCAATTTCCTGGTTGTGGTG  1923

Query 1510  TTATGTATAGTAATGGATCGACCTTATCAATTCTATTACTTTGTCCCCTTGGTCACTGTATGGTTCATGGTCAT  1583
            ||||||||.||||||||||||||.|||||.|||||||||||||||||||||||.||.||.||||||||||||||
Sbjct 1924  TTATGTATCGTAATGGATCGACCATATCAGTTCTATTACTTTGTCCCCTTGGTTACCGTGTGGTTCATGGTCAT  1997

Query 1584  ATATGTTACTTTAGCACTATGGCCACAAATAATCCAAAAAAAAGCAAACGGAAATTGTTTCTGGCATTTTGGCT  1657
            ||||||.|||||||||||.|||||||||||||.||||||.||.|||||.|||||||.|||||||.||.|.||||
Sbjct 1998  ATATGTCACTTTAGCACTGTGGCCACAAATAACCCAAAAGAAGGCAAATGGAAATTTTTTCTGGTATCTCGGCT  2071

Query 1658  TACTGTTGAAACTAGGCTTTTTGCTGTTATTCATATGTTTTTTGGCATATTCTCAGGGTGCATTTGAGAAGATC  1731
            |||||||||||||||||||..|||||.|.|.||||||.||.||||||||||||||||                 
Sbjct 2072  TACTGTTGAAACTAGGCTTGCTGCTGCTGTGCATATGGTTCTTGGCATATTCTCAGG-----------------  2128

Query 1732  TTTTCTCTTTGGCCATTGTCCAAGTGTTTTGAACTGAAAGGGAATGTATATGAATGGTGGTTCAGATGGAGGTT  1805
                           |||||                                                      
Sbjct 2129  ---------------TTGTC------------------------------------------------------  2133

Query 1806  AGACCGTTATGTAGTTTTCCACGGAATGCTGTTTGCTTTTATTTATCTGGCCTTGCAGAAGCGTCAAATACTTT  1879
                            |||||.||..|.|||||||||||.|||||||||||.|||||||..||.||||||||||
Sbjct 2134  ----------------TTCCATGGGGTTCTGTTTGCTTTCATTTATCTGGCTTTGCAGAGACGGCAAATACTTT  2191

Query 1880  CTGAAGGAAAGGGTGAACCTCTTTTTTCAAACAAAATTTCAAATTTTCTGTTGTTTATTTCAGTAGTTTCTTTC  1953
            |||||||||||||||||||.||.|||||||||||||||||.||.|||||.||||||.||||||||||.||||||
Sbjct 2192  CTGAAGGAAAGGGTGAACCACTCTTTTCAAACAAAATTTCCAACTTTCTATTGTTTGTTTCAGTAGTGTCTTTC  2265

Query 1954  TTGACCTATTCCATCTGGGCTAGCAGTTGTAAAAACAAAGCAGAGTGCAATGAACTCCATCCGTCTGTTTCTGT  2027
            ||||||||||||||||||||||||||.|||||.||||||||||||||.||.||||||||.||.|||||.|||||
Sbjct 2266  TTGACCTATTCCATCTGGGCTAGCAGCTGTAAGAACAAAGCAGAGTGTAACGAACTCCACCCATCTGTGTCTGT  2339

Query 2028  GGTACAGATTTTAGCCTTCATCCTAATAAGAAACATCCCTGGATATGCCCGTTCAGTTTACAGTTCATTTTTTG  2101
            ||||||||||.|||||||||||||.|||||.|||||.|||||||||||||||||..|.||||||||.|||||||
Sbjct 2340  GGTACAGATTGTAGCCTTCATCCTGATAAGGAACATACCTGGATATGCCCGTTCTATATACAGTTCTTTTTTTG  2413

Query 2102  CTTGGTTTGGAAAAATTTCATTAGAGCTATTTATTTGCCAGTATCACATATGGCTGGCAGCGGACACAAGGGGT  2175
            ||||||||||||||||||||.|||||||.||.||.||||||||.|||||.|||||||||||.|||||||||||.
Sbjct 2414  CTTGGTTTGGAAAAATTTCACTAGAGCTGTTCATCTGCCAGTACCACATCTGGCTGGCAGCAGACACAAGGGGC  2487

Query 2176  ATCTTGGTACTGATACCTGGAAACCCTATGCTCAACATCATTGTCAGCACTTTCATATTTGTTTGTGTGGCACA  2249
            |||.||||.||.||.|||||||||||.|..|||||||||||.||||||||.|||||.||.||||||||||||||
Sbjct 2488  ATCCTGGTCCTCATCCCTGGAAACCCGACACTCAACATCATCGTCAGCACGTTCATCTTCGTTTGTGTGGCACA  2561

Query 2250  TGAAATTTCTCAGATCACTAATGATCTTGCACAGATTATTATTCCTAAAGATAACTCATCTCTCTTGAAAAGGT  2323
            |||.||||||||||||||.|.|||.||.||.|||.|..|||||||||||||||||.|.||||||||...||||.
Sbjct 2562  TGAGATTTCTCAGATCACCACTGACCTCGCGCAGGTCGTTATTCCTAAAGATAACCCGTCTCTCTTCCGAAGGC  2635

Query 2324  TGGCATGTATAGCTGCATTTTTTTGTGGACTCCTCATCTTATCATCCATTCAAGATAAATCAAAACAT-  2391
            |||||||||....||||||.|||.|||||.|||||||||||||.|||||||||||||||||||.|| | 
Sbjct 2636  TGGCATGTACGATTGCATTCTTTGGTGGAGTCCTCATCTTATCCTCCATTCAAGATAAATCAAGAC-TG  2703

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