Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_08879
- Subject:
- XM_006505029.2
- Aligned Length:
- 2807
- Identities:
- 2058
- Gaps:
- 520
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCTGTGCAGCCGTCGCCGCCCGCTGCCGCCAGTGACCCGGTGACCCCGGAGGCCCGTCTGGGCCCGGTGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCGGAGCCCCGGGCATCCGGACCCCCGTCACAGGCGCAGCCGCTATTAAGGCAGGAGGCTACCAGGGAGGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGGGGAGGAGACAGGCGGCCAGGGCGCCTGGGGCACCGGCACGGCTGAGCAACGGCGGCGGGGTTGGGGGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCGACGAGGGCACGGGGAAGGCCGGCGGCACGGAGGCCGCAGGCTCGGACCCCTCGGCCCGCGGTTCGGGCGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGGCAAGGGAGCTGGCGGCCGCTTCTCGGCTGGCTACGGCGCCCGCCGCCCCAGTGCTGCCCCTGCGCGGCGC 370
Query 1 --------------------------------------------ATGGCGGCTCTGGCCTACAACCTGGGCAAG 30
||||||||||||||||||||||||||||||
Sbjct 371 CCCTTCCCCGCTCCGCCGCGCACTGTTGTCATGGAGGAACCAAGATGGCGGCTCTGGCCTACAACCTGGGCAAG 444
Query 31 CGGGAGATCAACCACTACTTCAGCGTGAGGAGCGCCAAGGTGCTGGCGCTGGTGGCCGTGCTGCTGCTCGCAGC 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGGGAGATCAACCACTACTTCAGCGTGAGGAGCGCCAAGGTGCTGGCGCTGGTGGCCGTGCTGCTGCTCGCAGC 518
Query 105 GTGCCACCTCGCCTCCCGCCGCTACCGAGGCAATGATTCGTGTGAATACCTTCTCTCAAGTGGCAGATTTCTTG 178
||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||
Sbjct 519 GTGCCACCTCGCGTCCCGCCGCTACCGAGGCAATGATTCGTGTGAATACCTTCTCTCGAGCGGCAGATTTCTTG 592
Query 179 GAGAGAAAGTTTGGCAACCTCACAGTTGTATGATGCATAAATACAAAATCAGTGAAGCAAAGAACTGCCTTGTA 252
||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||..|||||||||
Sbjct 593 GAGAAAAAGTTTGGCAACCTCACAGTTGTATGATGCATAAATACAAAATAAGTGAAGCAAAGACTTGCCTTGTA 666
Query 253 GATAAACATATTGCATTTATTGGAGATTCCAGAATTCGTCAATTGTTTTATTCTTTTGTAAAAATAATTAATCC 326
||||||||.|||||.|||||||||||||||||.||.||||||||.||||||||||||||||||||.|||||.||
Sbjct 667 GATAAACACATTGCGTTTATTGGAGATTCCAGGATCCGTCAATTATTTTATTCTTTTGTAAAAATCATTAACCC 740
Query 327 CCAATTCAAAGAAGAAGGAAATAAGCATGAAAACATTCCTTTTGAAGACAAGACTGCATCAGTTAAAGTGGATT 400
|||.||.|||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 741 CCAGTTTAAAGAAGAAGGAAATAAGCATGAAAACATTCCTTTTGAAGACAAGGCTGCATCAGTTAAAGTGGATT 814
Query 401 TTCTGTGGCATCCTGAAGTTAATGGTTCTATGAAACAGTGTATCAAAGTGTGGACTGAGGATTCCATTGCAAAG 474
||||.||||||||.||||||||||||||.||||||||.||||||||.||||||||||||||.||..||...|||
Sbjct 815 TTCTTTGGCATCCAGAAGTTAATGGTTCCATGAAACAATGTATCAAGGTGTGGACTGAGGACTCGGTTTTGAAG 888
Query 475 CCACATGTGATTGTAGCAGGAGCTGCCACATGGTCCATCAAGATTCACAATGGTAGC-AGTGAAGCGCTTTCTC 547
||.||||||||||||||||||||.|||||||||||||||||||||||.|||||.||| || ||.||.||..|||
Sbjct 889 CCCCATGTGATTGTAGCAGGAGCAGCCACATGGTCCATCAAGATTCATAATGGCAGCGAG-GAGGCACTAGCTC 961
Query 548 AATATAAAATGAACATCACCTCCATAGCACCACTTTTAGAAAAATTGGCAAAGACTAGTGATGTTTATTGGGTC 621
|.|||||||||||.||||||||||||||||||||.||||||||||||||.||||||||||||||||||||||||
Sbjct 962 AGTATAAAATGAATATCACCTCCATAGCACCACTCTTAGAAAAATTGGCCAAGACTAGTGATGTTTATTGGGTC 1035
Query 622 TTACAAGATCCTGTTTATGAAGATCTATTAAGTGAAAATAGGAAGATGATCACTAATGAGAAGATAGATGCTTA 695
||||||||.||.||||||||.|||||.|||||||||||||||||.|||||.||.||||||||||||||.||.||
Sbjct 1036 TTACAAGACCCAGTTTATGAGGATCTCTTAAGTGAAAATAGGAAAATGATTACCAATGAGAAGATAGACGCCTA 1109
Query 696 CAATGAAGCTGCAGTCAGTATTTTGAATAGTAGCACCAGAAATTCTAAATCAAATGTTAAGATGTTCAGTGTTT 769
||||||.|||||||||||.||..||||.||.||||||||.|..|||||.||.|||||.||||||||||||||||
Sbjct 1110 CAATGAGGCTGCAGTCAGCATCCTGAACAGCAGCACCAGGACCTCTAAGTCCAATGTGAAGATGTTCAGTGTTT 1183
Query 770 CCAAATTAATTGCTCAAGAAACCATCATGGAATCTTTGGATGGCTTACATCTTCCTGAATCGAGCAGAGAAACT 843
|||||.|.|||||.|||||.|||||||||||.|||.|||||||||||||.||||||||||||||||||||||||
Sbjct 1184 CCAAACTCATTGCCCAAGAGACCATCATGGAGTCTCTGGATGGCTTACACCTTCCTGAATCGAGCAGAGAAACT 1257
Query 844 ACTGCAATGATTCTTATGAATGTGTATTGCAATAAGATTTTGAAGCCTGTAGATGGGTCCTGTTGTCAACCTCG 917
|.||||||||||||.|||||.|||||.||||||||..||.||||||||||.|||||.|||||||||||.|||||
Sbjct 1258 AGTGCAATGATTCTCATGAACGTGTACTGCAATAAAGTTGTGAAGCCTGTGGATGGTTCCTGTTGTCAGCCTCG 1331
Query 918 GCCTCCTGTTACTCTCATACAGAAGCTAGCTGCTTGTTTTTTCACTTTATCTATTATCGGATATTTAATTTTTT 991
|||.|||.|.||||||||.|||||||||||||||||.||||||||||||||.|||||.||.|||||.|||||.|
Sbjct 1332 GCCACCTCTCACTCTCATTCAGAAGCTAGCTGCTTGCTTTTTCACTTTATCCATTATTGGGTATTTCATTTTCT 1405
Query 992 ACATAATTCATCGTAATGCTCATCGGAAGAATAAGCCGTGTACTGATTTGGAAAGTGGAGAGGAAAAGAAAAAT 1065
|..|||||||||||||||||||.|||||||||||.||.||||||||||||||.|||||.|||||||||||.|||
Sbjct 1406 ATGTAATTCATCGTAATGCTCACCGGAAGAATAAACCATGTACTGATTTGGAGAGTGGCGAGGAAAAGAAGAAT 1479
Query 1066 ATTATCAATACCCCTGTGTCTTCATTAGAAATACTTTTACAATCTTTCTGCAAACTTGGCCTGATTATGGCATA 1139
|||||||||||.|||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||.||
Sbjct 1480 ATTATCAATACTCCTGTGTCTTCATTAGAAATACTTTTACAGTCTTTTTGCAAACTTGGCCTGATTATGGCTTA 1553
Query 1140 TTTCTATATGTGTGACAGTGCAAATCTGTTCATGAAGGAAAACAAATTTTATACACATTCATCTTTCTTTATTC 1213
||||||||||||||||.|||||||.|||||.||||||||||||||||||||||||||||||||.||||||||||
Sbjct 1554 TTTCTATATGTGTGACCGTGCAAACCTGTTTATGAAGGAAAACAAATTTTATACACATTCATCATTCTTTATTC 1627
Query 1214 CAATTATCTACATTTTGGTTTTGGGAGTATTTTATAATGAAAATACTAAAGAGACTAAAGTATTAAATAGAGAA 1287
|||||||||||||.||||||||||||||||||||.||||||||.||.||||||||||||||.|||||||||||.
Sbjct 1628 CAATTATCTACATCTTGGTTTTGGGAGTATTTTACAATGAAAACACAAAAGAGACTAAAGTGTTAAATAGAGAG 1701
Query 1288 CAAACAGACGAATGGAAAGGCTGGATGCAACTTGTGATTTTGATTTATCACATTTCTGGAGCAAGTACATTTTT 1361
|||||.||.||||||||||||||||||||.||||||||||||||.||||||||.||.||||||||.||||||.|
Sbjct 1702 CAAACTGATGAATGGAAAGGCTGGATGCAGCTTGTGATTTTGATCTATCACATCTCGGGAGCAAGCACATTTCT 1775
Query 1362 GCCTGTATACATGCACATTCGAGTTCTGGTTGCTGCATATTTATTTCAGACAGGGTATGGGCATTTCTCATACT 1435
||||||.|||||||||||||||||||||||.|||||||||.|.||||||||||||||.|||||||||||.||||
Sbjct 1776 GCCTGTGTACATGCACATTCGAGTTCTGGTGGCTGCATATCTGTTTCAGACAGGGTACGGGCATTTCTCTTACT 1849
Query 1436 TTTGGATAAAAGGAGATTTTGGAATCTACAGAGTATGTCAGGTTTTATTTCGTCTCAATTTCCTGGTAGTGGTG 1509
|||||||.||||||||||||||.||..|.|||||.||||||||.|||||||||||||||||||||||.||||||
Sbjct 1850 TTTGGATCAAAGGAGATTTTGGGATTCATAGAGTGTGTCAGGTCTTATTTCGTCTCAATTTCCTGGTTGTGGTG 1923
Query 1510 TTATGTATAGTAATGGATCGACCTTATCAATTCTATTACTTTGTCCCCTTGGTCACTGTATGGTTCATGGTCAT 1583
||||||||.||||||||||||||.|||||.|||||||||||||||||||||||.||.||.||||||||||||||
Sbjct 1924 TTATGTATCGTAATGGATCGACCATATCAGTTCTATTACTTTGTCCCCTTGGTTACCGTGTGGTTCATGGTCAT 1997
Query 1584 ATATGTTACTTTAGCACTATGGCCACAAATAATCCAAAAAAAAGCAAACGGAAATTGTTTCTGGCATTTTGGCT 1657
||||||.|||||||||||.|||||||||||||.||||||.||.|||||.|||||||.|||||||.||.|.||||
Sbjct 1998 ATATGTCACTTTAGCACTGTGGCCACAAATAACCCAAAAGAAGGCAAATGGAAATTTTTTCTGGTATCTCGGCT 2071
Query 1658 TACTGTTGAAACTAGGCTTTTTGCTGTTATTCATATGTTTTTTGGCATATTCTCAGGGTGCATTTGAGAAGATC 1731
|||||||||||||||||||..|||||.|.|.||||||.||.||||||||||||||||
Sbjct 2072 TACTGTTGAAACTAGGCTTGCTGCTGCTGTGCATATGGTTCTTGGCATATTCTCAGG----------------- 2128
Query 1732 TTTTCTCTTTGGCCATTGTCCAAGTGTTTTGAACTGAAAGGGAATGTATATGAATGGTGGTTCAGATGGAGGTT 1805
|||||
Sbjct 2129 ---------------TTGTC------------------------------------------------------ 2133
Query 1806 AGACCGTTATGTAGTTTTCCACGGAATGCTGTTTGCTTTTATTTATCTGGCCTTGCAGAAGCGTCAAATACTTT 1879
|||||.||..|.|||||||||||.|||||||||||.|||||||..||.||||||||||
Sbjct 2134 ----------------TTCCATGGGGTTCTGTTTGCTTTCATTTATCTGGCTTTGCAGAGACGGCAAATACTTT 2191
Query 1880 CTGAAGGAAAGGGTGAACCTCTTTTTTCAAACAAAATTTCAAATTTTCTGTTGTTTATTTCAGTAGTTTCTTTC 1953
|||||||||||||||||||.||.|||||||||||||||||.||.|||||.||||||.||||||||||.||||||
Sbjct 2192 CTGAAGGAAAGGGTGAACCACTCTTTTCAAACAAAATTTCCAACTTTCTATTGTTTGTTTCAGTAGTGTCTTTC 2265
Query 1954 TTGACCTATTCCATCTGGGCTAGCAGTTGTAAAAACAAAGCAGAGTGCAATGAACTCCATCCGTCTGTTTCTGT 2027
||||||||||||||||||||||||||.|||||.||||||||||||||.||.||||||||.||.|||||.|||||
Sbjct 2266 TTGACCTATTCCATCTGGGCTAGCAGCTGTAAGAACAAAGCAGAGTGTAACGAACTCCACCCATCTGTGTCTGT 2339
Query 2028 GGTACAGATTTTAGCCTTCATCCTAATAAGAAACATCCCTGGATATGCCCGTTCAGTTTACAGTTCATTTTTTG 2101
||||||||||.|||||||||||||.|||||.|||||.|||||||||||||||||..|.||||||||.|||||||
Sbjct 2340 GGTACAGATTGTAGCCTTCATCCTGATAAGGAACATACCTGGATATGCCCGTTCTATATACAGTTCTTTTTTTG 2413
Query 2102 CTTGGTTTGGAAAAATTTCATTAGAGCTATTTATTTGCCAGTATCACATATGGCTGGCAGCGGACACAAGGGGT 2175
||||||||||||||||||||.|||||||.||.||.||||||||.|||||.|||||||||||.|||||||||||.
Sbjct 2414 CTTGGTTTGGAAAAATTTCACTAGAGCTGTTCATCTGCCAGTACCACATCTGGCTGGCAGCAGACACAAGGGGC 2487
Query 2176 ATCTTGGTACTGATACCTGGAAACCCTATGCTCAACATCATTGTCAGCACTTTCATATTTGTTTGTGTGGCACA 2249
|||.||||.||.||.|||||||||||.|..|||||||||||.||||||||.|||||.||.||||||||||||||
Sbjct 2488 ATCCTGGTCCTCATCCCTGGAAACCCGACACTCAACATCATCGTCAGCACGTTCATCTTCGTTTGTGTGGCACA 2561
Query 2250 TGAAATTTCTCAGATCACTAATGATCTTGCACAGATTATTATTCCTAAAGATAACTCATCTCTCTTGAAAAGGT 2323
|||.||||||||||||||.|.|||.||.||.|||.|..|||||||||||||||||.|.||||||||...||||.
Sbjct 2562 TGAGATTTCTCAGATCACCACTGACCTCGCGCAGGTCGTTATTCCTAAAGATAACCCGTCTCTCTTCCGAAGGC 2635
Query 2324 TGGCATGTATAGCTGCATTTTTTTGTGGACTCCTCATCTTATCATCCATTCAAGATAAATCAAAACAT- 2391
|||||||||....||||||.|||.|||||.|||||||||||||.|||||||||||||||||||.|| |
Sbjct 2636 TGGCATGTACGATTGCATTCTTTGGTGGAGTCCTCATCTTATCCTCCATTCAAGATAAATCAAGAC-TG 2703
