Nucleotide Global Alignment

Description

Query:
ccsbBroad304_09195
Subject:
NM_025676.4
Aligned Length:
2523
Identities:
2109
Gaps:
111

Alignment

Query    1  ATGAATGGAGAGTATAGAGGCAGAGGATTTGGACGAGGAAGATTTCAAAGCTGGAAAAGGGGAAGAGGTGGTGG  74
            ||||.|||.|..||||||||||||||.|||||||||||||||||.||||||||||||||.||||||||||||||
Sbjct    1  ATGAGTGGTGCTTATAGAGGCAGAGGTTTTGGACGAGGAAGATTCCAAAGCTGGAAAAGAGGAAGAGGTGGTGG  74

Query   75  GAACTTCTCAGGAAAATGGAGAGAAAGAGAACACAGACCTGATCTGAGTAAAACCACAGGAAA--ACGTACTTC  146
            ||||||||||||||..|||||||||||||||.|||||..|||.||||.|.||.|..|||||||  |||  ||||
Sbjct   75  GAACTTCTCAGGAAGGTGGAGAGAAAGAGAAAACAGAGTTGACCTGAATGAAGCTTCAGGAAAGCACG--CTTC  146

Query  147  TGAACAAACCCCACAGTTTTTGCTTTCAACAAAGACCCCACAGTCAATGCAGTCAACATTGGATCGATTCATAC  220
            |                                                                         
Sbjct  147  T-------------------------------------------------------------------------  147

Query  221  CATATAAAGGCTGGAAGCTTTATTTCTCTGAAGTTTACAGCGATAGCTCTCCTTTGATTGAGAAGATTCAAGCA  294
                                            ||||||||..|||.||||||.||.||||||||||||||||||
Sbjct  148  --------------------------------GTTTACAGTAATAACTCTCCCTTTATTGAGAAGATTCAAGCA  189

Query  295  TTTGAAAAATTTTTCACAAGGCATATTGATTTGTATGACAAGGATGAAATAGAAAGAAAGGGAAGTATTTTGGT  368
            |||||.||||||||||||||||||||.||.||.||.||.||||||||||||||||||||.|||||.||||||||
Sbjct  190  TTTGAGAAATTTTTCACAAGGCATATCGACTTATACGATAAGGATGAAATAGAAAGAAAAGGAAGCATTTTGGT  263

Query  369  AGATTTTAAAGAACTGACAGAAGGTGGTGAAGTAACTAACTTGATACCAGATATAGCAACTGAACTAAGAGATG  442
            .||||||||||||||||||.|||.||.||||.||||||||||||||||.|||||||.||..|.|||||||||||
Sbjct  264  GGATTTTAAAGAACTGACAAAAGCTGATGAAATAACTAACTTGATACCCGATATAGAAAACGCACTAAGAGATG  337

Query  443  CACCTGAGAAAACCTTGGCTTGCATGGGTTTGGCAATACATCAGGTGTTAACTAAGGACCTTGAAAGGCATGCA  516
            |.|||||||||||..||||.||.|||||..||||||||||||||||.||||||||||||||||||||||||||.
Sbjct  338  CCCCTGAGAAAACACTGGCGTGTATGGGGCTGGCAATACATCAGGTATTAACTAAGGACCTTGAAAGGCATGCC  411

Query  517  GCTGAGTTACAAGCCCAGGAAGGATTGTCTAATGATGGAGAAACAATGGTAAATGTGCCACATATTCATGCAAG  590
            ||.||.||||||||.||.||.|||||||||||.|.||||||.||||||||||||||.|||||||||.|||||||
Sbjct  412  GCCGAATTACAAGCTCAAGAGGGATTGTCTAACGGTGGAGAGACAATGGTAAATGTACCACATATTTATGCAAG  485

Query  591  GGTGTACAACTATGAGCCTTTGACACAGCTCAAGAATGTCAGAGCAAATTACTATGGAAAATACATTGCTCTAA  664
            .|||||||||||||||||.||||||||.|||||||||.||.||||||.||.||||||.||||||||..||.||.
Sbjct  486  AGTGTACAACTATGAGCCCTTGACACACCTCAAGAATATCCGAGCAACTTGCTATGGGAAATACATCTCTATAC  559

Query  665  GAGGGACAGTGGTTCGTGTCAGTAATATAAAGCCTCTTTGCACCAAGATGGCTTTTCTTTGTGCTGCATGTGGA  738
            |||||||.|||||.||.|||||.||.||||||||||||||||||||.||||||||||..||.||||||||||||
Sbjct  560  GAGGGACTGTGGTCCGGGTCAGCAACATAAAGCCTCTTTGCACCAACATGGCTTTTCAGTGCGCTGCATGTGGA  633

Query  739  GAAATTCAGAGCTTTCCTCTTCCAGATGGAAAATACAGTCTTCCCACAAAGTGTCCTGTGCCTGTGTGTCGAGG  812
            ||.|||||||||||||||||.||||||||||||||||..|||||.|||||||||||||||||||.|||.|||||
Sbjct  634  GAGATTCAGAGCTTTCCTCTGCCAGATGGAAAATACACCCTTCCTACAAAGTGTCCTGTGCCTGCGTGCCGAGG  707

Query  813  CAGGTCATTTACTGCTCTCCGCAGCTCTCCTCTCACAGTTACGATGGACTGGCAGTCAATCAAAATCCAGGAAT  886
            .|||||||||.||.|.||.|||||||||||||||||||||||..||||||||||||..||||||||||||||..
Sbjct  708  GAGGTCATTTGCTCCACTGCGCAGCTCTCCTCTCACAGTTACACTGGACTGGCAGTTGATCAAAATCCAGGAGC  781

Query  887  TGATGTCTGATGATCAGAGAGAAGCAGGTCGGATTCCACGAACAATAGAATGTGAGCTTGTTCATGATCTTGTG  960
            ||||||||||||..|||||||||||.||||||||.||.||.||.|||||||||||.||||||||.||||||||.
Sbjct  782  TGATGTCTGATGCACAGAGAGAAGCTGGTCGGATCCCTCGGACGATAGAATGTGAACTTGTTCACGATCTTGTA  855

Query  961  GATAGCTGTGTCCCGGGAGACACAGTGACTATTACTGGAATTGTCAAAGTCTCAAATGCGGAAGAAGGTTCTCG  1034
            |||||.||||||||.|||||.|||||||||.||||||||||||||||||||||.|||.|.||||||||||||||
Sbjct  856  GATAGTTGTGTCCCAGGAGATACAGTGACTGTTACTGGAATTGTCAAAGTCTCCAATTCTGAAGAAGGTTCTCG  929

Query 1035  AAATAAGAATGACAAGTGTATGTTCCTTTTGTATATTGAAGCAAATTCTATTAGTAATAGCAAAGGACAGAAAA  1108
            ||||||||||||.|||||.||||||||||||||.|||||.|||||||||.||||.||.|||||.||.|.||||.
Sbjct  930  AAATAAGAATGATAAGTGCATGTTCCTTTTGTACATTGAGGCAAATTCTGTTAGCAACAGCAAGGGGCCGAAAG  1003

Query 1109  CAAAGAGTTCTGAGGATGGGTGTAAGCATGGAATGTTGATGGAGTTCTCACTTAAAGACCTTTATGCCATCCAA  1182
            ||.|||.|.|.||.|||||.||.||||||||.|...|||||||||||||.|||||||||||.||||||||||.|
Sbjct 1004  CACAGACTGCAGAAGATGGTTGCAAGCATGGGACACTGATGGAGTTCTCCCTTAAAGACCTCTATGCCATCCGA  1077

Query 1183  GAGATTCAAGCTGAAGAAAACCTGTTTAAACTCATTGTCAACTCGCTTTGCCCTGTCATTTTTGGTCATGAACT  1256
            |||||.||.||||||||.||||||.|.||.|||.||||||||||.||.||.|||||||||||||||||||||||
Sbjct 1078  GAGATCCAGGCTGAAGAGAACCTGCTCAAGCTCGTTGTCAACTCACTCTGTCCTGTCATTTTTGGTCATGAACT  1151

Query 1257  TGTTAAAGCAGGTTTGGCATTAGCACTCTTTGGAGGAAGCCAGAAATACGCAGATGACAAAAACAGAATTCCAA  1330
            .||.|||||||||.||.|.||||||||||||||.||.||||||||.||||||||||||||||||||||||||.|
Sbjct 1152  CGTCAAAGCAGGTCTGACGTTAGCACTCTTTGGCGGTAGCCAGAAGTACGCAGATGACAAAAACAGAATTCCCA  1225

Query 1331  TTCGGGGAGACCCCCACATCCTTGTTGTTGGAGATCCAGGCTTAGGAAAAAGTCAAATGCTACAGGCAGCGTGC  1404
            ||||.||||||||.||..||||..|||||||||||||||||||.||.||.|||||.||||||||||||||.|||
Sbjct 1226  TTCGAGGAGACCCACATGTCCTGATTGTTGGAGATCCAGGCTTGGGGAAGAGTCAGATGCTACAGGCAGCATGC  1299

Query 1405  AATGTTGCCCCACGTGGCGTGTATGTTTGTGGTAACACCACGACCACCTCTGGTCTGACGGTAACTCTTTCAAA  1478
            ||.||.||.||||||||.||||||||||||||.||.|||||.||||.|||||||||.||.||.|||||||||||
Sbjct 1300  AACGTGGCGCCACGTGGTGTGTATGTTTGTGGAAATACCACCACCAGCTCTGGTCTCACTGTGACTCTTTCAAA  1373

Query 1479  AGATAGTTCCTCTGGAGATTTTGCTTTGGAAGCTGGTGCCCTGGTACTTGGTGATCAAGGTATTTGTGGAATCG  1552
            .||.||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||.||.||||||||.|
Sbjct 1374  GGACAGTTCCTCTGGAGATTTTGCTTTGGAAGCTGGTGCCCTTGTACTTGGTGACCAAGGCATCTGTGGAATAG  1447

Query 1553  ATGAATTTGATAAGATGGGGAATCAACATCAAGCCTTGTTGGAAGCCATGGAGCAGCAAAGTATTAGTCTTGCT  1626
            |||||||||||||.||||||||.||||||||||||.||||.|||||||||||.|||||.||||||||.|||||.
Sbjct 1448  ATGAATTTGATAAAATGGGGAACCAACATCAAGCCCTGTTAGAAGCCATGGAACAGCAGAGTATTAGCCTTGCG  1521

Query 1627  AAGGCTGGTGTGGTTTGTAGCCTTCCTGCAAGAACTTCCATTATTGCTGCTGCAAATCCAGTTGGAGGACATTA  1700
            ||||||||.||.|||||.|||||.||||||||||||||||||||||||||||||||||||||.||||||||.||
Sbjct 1522  AAGGCTGGGGTAGTTTGCAGCCTCCCTGCAAGAACTTCCATTATTGCTGCTGCAAATCCAGTCGGAGGACACTA  1595

Query 1701  CAATAAAGCCAAAACAGTTTCTGAGAATTTAAAAATGGGGAGTGCACTACTATCCAGATTTGATTTGGTCTTTA  1774
            |||||||||||.|||.|||||||||||||||||.|||||||||||.|||||.||||||||.|||||||||||||
Sbjct 1596  CAATAAAGCCAGAACGGTTTCTGAGAATTTAAAGATGGGGAGTGCCCTACTGTCCAGATTCGATTTGGTCTTTA  1669

Query 1775  TCCTGTTAGATACTCCAAATGAGCATCATGATCACTTACTCTCTGAACATGTGATTGCAATAAGAGCTGGAAAG  1848
            ||.||||||||||.||||||||.||.|||||.||||||||.||||||||||||||.||.|||||||||||.|||
Sbjct 1670  TCTTGTTAGATACGCCAAATGAACAGCATGACCACTTACTTTCTGAACATGTGATCGCGATAAGAGCTGGGAAG  1743

Query 1849  CAGAGAACCATTAGCAGTGCCACAGTAGCTCGTATGAATAGTCAAGATTCAAATACTTCCGTACTTGAAGTAGT  1922
            ||||.|.|..||||||||||||||||..|||||.||...||||||||.|||||||||||.|||||||||||.||
Sbjct 1744  CAGAAAGCGGTTAGCAGTGCCACAGTCACTCGTGTGCTCAGTCAAGACTCAAATACTTCTGTACTTGAAGTGGT  1817

Query 1923  TTCTGAGAAGCCATTATCAGAAAGACTAAAGGTGGTTCCTGGAGAAACA-ATAGATCCCATTCCCCACCAGCTA  1995
            |||||||||.|||||||||||||||||||||||||.|||||||| |||| |.||||||.|||||.||.|||||.
Sbjct 1818  TTCTGAGAAACCATTATCAGAAAGACTAAAGGTGGCTCCTGGAG-AACAGACAGATCCGATTCCACATCAGCTG  1890

Query 1996  TTGAGAAAGTACATTGGCTATGCTCGGCAGTATGTGTACCCAAGGCTATCCACAGAAGCTGCTCGAGTTCTTCA  2069
            |||||.|||||||||||||||||.|||||||||||..||||||||.||||.||.||.|||||||..|..|||||
Sbjct 1891  TTGAGGAAGTACATTGGCTATGCACGGCAGTATGTCCACCCAAGGTTATCTACGGACGCTGCTCAGGCCCTTCA  1964

Query 2070  AGATTTTTACCTTGAGCTCCGGAAACAGAGCCAGAGGTTAAATAGCTCACCAATCACTACCAGGCAGCTGGAAT  2143
            .|||||.|||||.||||||||.||.|||||||||.|..|....||||||||.|||||.||..||||||||||.|
Sbjct 1965  GGATTTCTACCTGGAGCTCCGCAAGCAGAGCCAGCGCGTGGGCAGCTCACCCATCACCACTCGGCAGCTGGAGT  2038

Query 2144  CTTTGATTCGTCTGACAGAGGCACGAGCAAGGTTGGAATTGAGAGAGGAAGCAACCAAAGAAGACGCTGAGGAT  2217
            |||||||.|||||||||||||||||.||||||||.||||||||||||||||||||.|.||||||.|||||.|||
Sbjct 2039  CTTTGATCCGTCTGACAGAGGCACGGGCAAGGTTAGAATTGAGAGAGGAAGCAACTAGAGAAGATGCTGAAGAT  2112

Query 2218  ATAGTGGAAATTATGAAATATAGCATGCTAGGAACTTACTCTGATGAATTTGGGAACCTAGATTTTGAGCGATC  2291
            |||.|.|||||||||||..||||||||||||||||||||||.||||||||.||.|||||.||.|||||||||||
Sbjct 2113  ATAATTGAAATTATGAAGCATAGCATGCTAGGAACTTACTCAGATGAATTCGGAAACCTGGACTTTGAGCGATC  2186

Query 2292  CCAGCATGGTTCTGGAATGAGCAACAGGTCAACAGCGAAAAGATTTATTTCTGCTCTCAACAACGTTGCTGAAA  2365
            |||||||||.|||||.||||||||||||||||||||.|||||||||||||||||||||||||.|.|||||||||
Sbjct 2187  CCAGCATGGCTCTGGGATGAGCAACAGGTCAACAGCAAAAAGATTTATTTCTGCTCTCAACAGCATTGCTGAAA  2260

Query 2366  GAACTTATAATAATATATTTCAATTTCATCAACTTCGGCAGATTGCCAAAGAACTAAACATTCAGGTTGCTGAT  2439
            ||||||||||.||.||||||||||.||||||||||||.||||||||.|||||||||||||||||||||||.|||
Sbjct 2261  GAACTTATAACAACATATTTCAATATCATCAACTTCGTCAGATTGCTAAAGAACTAAACATTCAGGTTGCCGAT  2334

Query 2440  TTTGAAAATTTTATTGGATCACTAAATGACCAGGGTTACCTCTTGAAAAAAGGCCCAAAAGTTTACCAGCTTCA  2513
            ||||||||.||.|||||||||||.||||||||.|||||.||||||||.|||||||||||..|||||||.|||||
Sbjct 2335  TTTGAAAACTTCATTGGATCACTGAATGACCAAGGTTATCTCTTGAAGAAAGGCCCAAAGATTTACCAACTTCA  2408

Query 2514  AACTATG  2520
            |||||||
Sbjct 2409  AACTATG  2415

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