Nucleotide Global Alignment

Description

Query:
ccsbBroad304_09321
Subject:
XM_011527479.1
Aligned Length:
3186
Identities:
3012
Gaps:
174

Alignment

Query    1  ATGCTACGAACCGCAGGCAGGGACGGCCTCTGTCGCCTGTCCACCTACTTGGAAGAACTCGAGGCTGTGGAACT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTACGAACCGCAGGCAGGGACGGCCTCTGTCGCCTGTCCACCTACTTGGAAGAACTCGAGGCTGTGGAACT  74

Query   75  GAAGAAGTTCAAGTTATACCTGGGGACCGCGACAGAGCTGGGAGAAGGCAAGATCCCCTGGGGAAGCATGGAGA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GAAGAAGTTCAAGTTATACCTGGGGACCGCGACAGAGCTGGGAGAAGGCAAGATCCCCTGGGGAAGCATGGAGA  148

Query  149  AGGCCGGTCCCCTGGAAATGGCCCAGCTGCTCATCACCCACTTCGGGCCAGAGGAGGCCTGGAGGTTGGCTCTC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGGCCGGTCCCCTGGAAATGGCCCAGCTGCTCATCACCCACTTCGGGCCAGAGGAGGCCTGGAGGTTGGCTCTC  222

Query  223  AGCACCTTTGAGCGGATAAACAGGAAGGACCTGTGGGAGAGAGGACAGAGAGAGGACCTGGTGAGGGATACCCC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AGCACCTTTGAGCGGATAAACAGGAAGGACCTGTGGGAGAGAGGACAGAGAGAGGACCTGGTGAGGGATACCCC  296

Query  297  ACCTGGTGGCCCGTCCTCACTTGGGAACCAGTCAACATGCCTTCTGGAAGTCTCTCTTGTCACTCCAAGAAAAG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ACCTGGTGGCCCGTCCTCACTTGGGAACCAGTCAACATGCCTTCTGGAAGTCTCTCTTGTCACTCCAAGAAAAG  370

Query  371  ATCCCCAGGAAACCTACAGGGACTATGTCCGCAGGAAATTCCGGCTCATGGAAGACCGCAATGCGCGCCTAGGG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATCCCCAGGAAACCTACAGGGACTATGTCCGCAGGAAATTCCGGCTCATGGAAGACCGCAATGCGCGCCTAGGG  444

Query  445  GAATGTGTCAACCTCAGCCACCGGTACACCCGGCTCCTGCTGGTGAAGGAGCACTCAAACCCCATGCAGGTCCA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAATGTGTCAACCTCAGCCACCGGTACACCCGGCTCCTGCTGGTGAAGGAGCACTCAAACCCCATGCAGGTCCA  518

Query  519  GCAGCAGCTTCTGGACACAGGCCGGGGACACGCGAGGACCGTGGGACACCAGGCTAGCCCCATCAAGATAGAGA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCAGCAGCTTCTGGACACAGGCCGGGGACACGCGAGGACCGTGGGACACCAGGCTAGCCCCATCAAGATAGAGA  592

Query  593  CCCTCTTTGAGCCAGACGAGGAGCGCCCCGAGCCACCGCGCACCGTGGTCATGCAAGGCGCGGCAGGGATAGGC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCCTCTTTGAGCCAGACGAGGAGCGCCCCGAGCCACCGCGCACCGTGGTCATGCAAGGCGCGGCAGGGATAGGC  666

Query  667  AAGTCCATGCTGGCACACAAGGTGATGCTGGACTGGGCGGACGGGAAGCTCTTCCAAGGCAGATTTGATTATCT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAGTCCATGCTGGCACACAAGGTGATGCTGGACTGGGCGGACGGGAAGCTCTTCCAAGGCAGATTTGATTATCT  740

Query  741  CTTCTACATCAACTGCAGGGAGATGAACCAGAGTGCCACGGAATGCAGCATGCAAGACCTCATCTTCAGCTGCT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTTCTACATCAACTGCAGGGAGATGAACCAGAGTGCCACGGAATGCAGCATGCAAGACCTCATCTTCAGCTGCT  814

Query  815  GGCCTGAGCCCAGCGCGCCTCTCCAGGAGCTCATCCGAGTTCCCGAGCGCCTCCTTTTCATCATCGACGGCTTC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GGCCTGAGCCCAGCGCGCCTCTCCAGGAGCTCATCCGAGTTCCCGAGCGCCTCCTTTTCATCATCGACGGCTTC  888

Query  889  GATGAGCTCAAGCCTTCTTTCCACGATCCTCAGGGACCCTGGTGCCTCTGCTGGGAGGAGAAACGGCCCACGGA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GATGAGCTCAAGCCTTCTTTCCACGATCCTCAGGGACCCTGGTGCCTCTGCTGGGAGGAGAAACGGCCCACGGA  962

Query  963  GCTGCTTCTTAACAGCTTAATTCGGAAGAAGCTGCTCCCTGAGCTATCTTTGCTCATCACCACACGGCCCACGG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GCTGCTTCTTAACAGCTTAATTCGGAAGAAGCTGCTCCCTGAGCTATCTTTGCTCATCACCACACGGCCCACGG  1036

Query 1037  CTTTGGAGAAGCTCCACCGTCTGCTGGAGCACCCCAGGCATGTGGAGATCCTGGGCTTCTCTGAGGCAGAAAGG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CTTTGGAGAAGCTCCACCGTCTGCTGGAGCACCCCAGGCATGTGGAGATCCTGGGCTTCTCTGAGGCAGAAAGG  1110

Query 1111  AAGGAATACTTCTACAAGTATTTCCACAATGCAGAGCAGGCGGGCCAAGTCTTCAATTACGTGAGGGACAACGA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AAGGAATACTTCTACAAGTATTTCCACAATGCAGAGCAGGCGGGCCAAGTCTTCAATTACGTGAGGGACAACGA  1184

Query 1185  GCCTCTCTTCACCATGTGCTTCGTCCCCCTGGTGTGCTGGGTGGTGTGTACCTGCCTCCAGCAGCAGCTGGAGG  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GCCTCTCTTCACCATGTGCTTCGTCCCCCTGGTGTGCTGGGTGGTGTGTACCTGCCTCCAGCAGCAGCTGGAGG  1258

Query 1259  GTGGGGGGCTGTTGAGACAGACGTCCAGGACCACCACTGCAGTGTACATGCTCTACCTGCTGAGTCTGATGCAA  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GTGGGGGGCTGTTGAGACAGACGTCCAGGACCACCACTGCAGTGTACATGCTCTACCTGCTGAGTCTGATGCAA  1332

Query 1333  CCCAAGCCGGGGGCCCCGCGCCTCCAGCCCCCACCCAACCAGAGAGGGTTGTGCTCCTTGGCGGCAGATGGGCT  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CCCAAGCCGGGGGCCCCGCGCCTCCAGCCCCCACCCAACCAGAGAGGGTTGTGCTCCTTGGCGGCAGATGGGCT  1406

Query 1407  CTGGAATCAGAAAATCCTATTTGAGGAGCAGGACCTCCGGAAGCACGGCCTAGACGGGGAAGACGTCTCTGCCT  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CTGGAATCAGAAAATCCTATTTGAGGAGCAGGACCTCCGGAAGCACGGCCTAGACGGGGAAGACGTCTCTGCCT  1480

Query 1481  TCCTCAACATGAACATCTTCCAGAAGGACATCAACTGTGAGAGGTACTACAGCTTCATCCACTTGAGTTTCCAG  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TCCTCAACATGAACATCTTCCAGAAGGACATCAACTGTGAGAGGTACTACAGCTTCATCCACTTGAGTTTCCAG  1554

Query 1555  GAATTCTTTGCAGCTATGTACTATATCCTGGACGAGGGGGAGGGCGGGGCAGGCCCAGACCAGGACGTGACCAG  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GAATTCTTTGCAGCTATGTACTATATCCTGGACGAGGGGGAGGGCGGGGCAGGCCCAGACCAGGACGTGACCAG  1628

Query 1629  GCTGTTGACCGAGTACGCGTTTTCTGAAAGGAGCTTCCTGGCACTCACCAGCCGCTTCCTGTTTGGACTCCTGA  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GCTGTTGACCGAGTACGCGTTTTCTGAAAGGAGCTTCCTGGCACTCACCAGCCGCTTCCTGTTTGGACTCCTGA  1702

Query 1703  ACGAGGAGACCAGGAGCCACCTGGAGAAGAGTCTCTGCTGGAAGGTCTCGCCGCACATCAAGATGGACCTGTTG  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  ACGAGGAGACCAGGAGCCACCTGGAGAAGAGTCTCTGCTGGAAGGTCTCGCCGCACATCAAGATGGACCTGTTG  1776

Query 1777  CAGTGGATCCAAAGCAAAGCTCAGAGCGACGGCTCCACCCTGCAGCAGGGCTCCTTGGAGTTCTTCAGCTGCTT  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  CAGTGGATCCAAAGCAAAGCTCAGAGCGACGGCTCCACCCTGCAGCAGGGCTCCTTGGAGTTCTTCAGCTGCTT  1850

Query 1851  GTACGAGATCCAGGAGGAGGAGTTTATCCAGCAGGCCCTGAGCCACTTCCAGGTGATCGTGGTCAGCAACATTG  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  GTACGAGATCCAGGAGGAGGAGTTTATCCAGCAGGCCCTGAGCCACTTCCAGGTGATCGTGGTCAGCAACATTG  1924

Query 1925  CCTCCAAGATGGAGCACATGGTCTCCTCGTTCTGTCTGAAGCGCTGCAGGAGCGCCCAGGTGCTGCACTTGTAT  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  CCTCCAAGATGGAGCACATGGTCTCCTCGTTCTGTCTGAAGCGCTGCAGGAGCGCCCAGGTGCTGCACTTGTAT  1998

Query 1999  GGCGCCACCTACAGCGCGGACGGGGAAGACCGCGCGAGGTGCTCCGCAGGAGCGCACACGCTGTTGGTGCAGCT  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  GGCGCCACCTACAGCGCGGACGGGGAAGACCGCGCGAGGTGCTCCGCAGGAGCGCACACGCTGTTGGTGCAGCT  2072

Query 2073  ---ACCAGAGAGGACCGTTCTGCTGGACGCCTACAGTGAACATCTGGCAGCGGCCCTGTGCACCAATCCAAACC  2143
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  CAGACCAGAGAGGACCGTTCTGCTGGACGCCTACAGTGAACATCTGGCAGCGGCCCTGTGCACCAATCCAAACC  2146

Query 2144  TGATAGAGCTGTCTCTGTACCGAAATGCCCTGGGCAGCCGGGGGGTGAAGCTGCTCTGTCAAGGACTCAGACAC  2217
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  TGATAGAGCTGTCTCTGTACCGAAATGCCCTGGGCAGCCGGGGGGTGAAGCTGCTCTGTCAAGGACTCAGACAC  2220

Query 2218  CCCAACTGCAAACTTCAGAACCTGAGGCTGAAGAGGTGCCGCATCTCCAGCTCAGCCTGCGAGGACCTCTCTGC  2291
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  CCCAACTGCAAACTTCAGAACCTGAGGCTGAAGAGGTGCCGCATCTCCAGCTCAGCCTGCGAGGACCTCTCTGC  2294

Query 2292  AGCTCTCATAGCCAATAAGAATTTGACAAGGATGGATCTCAGTGGCAACGGCGTTGGATTCCCAGGCATGATGC  2365
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  AGCTCTCATAGCCAATAAGAATTTGACAAGGATGGATCTCAGTGGCAACGGCGTTGGATTCCCAGGCATGATGC  2368

Query 2366  TGCTTTGCGAGGGCCTGCGGCATCCCCAGTGCAGGCTGCAGATGATTCAGTTGAGGAAGTGTCAGCTGGAGTCC  2439
            |||||||||||||||||||||||||||||||||||||||||||||||||                         
Sbjct 2369  TGCTTTGCGAGGGCCTGCGGCATCCCCAGTGCAGGCTGCAGATGATTCA-------------------------  2417

Query 2440  GGGGCTTGTCAGGAGATGGCTTCTGTGCTCGGCACCAACCCACATCTGGTTGAGTTGGACCTGACAGGAAATGC  2513
                                                                                      
Sbjct 2418  --------------------------------------------------------------------------  2417

Query 2514  ACTGGAGGATTTGGGCCTGAGGTTACTATGCCAGGGACTGAGGCACCCAGTCTGCAGACTACGGACTTTGTGGC  2587
                                                                                    ||
Sbjct 2418  ------------------------------------------------------------------------GC  2419

Query 2588  TGAAGATCTGCCGCCTCACTGCTGCTGCCTGTGACGAGCTGGCCTCAACTCTCAGTGTGAACCAGAGCCTGAGA  2661
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2420  TGAAGATCTGCCGCCTCACTGCTGCTGCCTGTGACGAGCTGGCCTCAACTCTCAGTGTGAACCAGAGCCTGAGA  2493

Query 2662  GAGCTGGACCTGAGCCTGAATGAGCTGGGGGACCTCGGGGTGCTGCTGCTGTGTGAGGGCCTCAGGCATCCCAC  2735
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2494  GAGCTGGACCTGAGCCTGAATGAGCTGGGGGACCTCGGGGTGCTGCTGCTGTGTGAGGGCCTCAGGCATCCCAC  2567

Query 2736  GTGCAAGCTCCAGACCCTGCGGTTGGGCATCTGCCGGCTGGGCTCTGCCGCCTGTGAGGGTCTTTCTGTGGTGC  2809
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2568  GTGCAAGCTCCAGACCCTGCGGTTGGGCATCTGCCGGCTGGGCTCTGCCGCCTGTGAGGGTCTTTCTGTGGTGC  2641

Query 2810  TCCAGGCCAACCACAACCTCCGGGAGCTGGACTTGAGTTTCAACGACCTGGGAGACTGGGGCCTGTGGTTGCTG  2883
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2642  TCCAGGCCAACCACAACCTCCGGGAGCTGGACTTGAGTTTCAACGACCTGGGAGACTGGGGCCTGTGGTTGCTG  2715

Query 2884  GCTGAGGGGCTGCAACATCCCGCCTGCAGACTCCAGAAACTGTGGCTGGATAGCTGTGGCCTCACAGCCAAGGC  2957
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2716  GCTGAGGGGCTGCAACATCCCGCCTGCAGACTCCAGAAACTGTGGCTGGATAGCTGTGGCCTCACAGCCAAGGC  2789

Query 2958  TTGTGAGAATCTTTACTTCACCCTGGGGATCAACCAGACCTTGACCGACCTTTACCTGACCAACAACGCCCTAG  3031
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2790  TTGTGAGAATCTTTACTTCACCCTGGGGATCAACCAGACCTTGACCGACCTTTACCTGACCAACAACGCCCTAG  2863

Query 3032  GGGACACAGGTGTCCGACTGCTTTGCAAGCGGCTGAGCCATCCTGGCTGCAAACTCCGAGTCCTCTGGTTATTT  3105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2864  GGGACACAGGTGTCCGACTGCTTTGCAAGCGGCTGAGCCATCCTGGCTGCAAACTCCGAGTCCTCTGGTTATTT  2937

Query 3106  GGGATGGACCTGAATAAAATGACCCACAGTAGGTTGGCAGCGCTTCGAGTAACAAAACCTTATTTGGACATTGG  3179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2938  GGGATGGACCTGAATAAAATGACCCACAGTAGGTTGGCAGCGCTTCGAGTAACAAAACCTTATTTGGACATTGG  3011

Query 3180  CTGC  3183
            ||||
Sbjct 3012  CTGC  3015

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