Nucleotide Global Alignment

Description

• Query: ccsbBroad304_09344
• Subject: NM_001305019.1
• Aligned Length: 1259
• Identities: 871
• Gaps: 304

Alignment

Query    1  ---------------------------------ATGGCGCCGCCTCTGGCCCCGCTCCCTCCCCGGGACCCAAA  41
                                             |||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGACCGATCCGTCGCTGGGGCTGACAGTCCCCATGGCGCCGCCTCTGGCCCCGCTCCCTCCCCGGGACCCAAA  74

Query   42  CGGGGCCGGACCCGAGTGGAGGGAGCCGGGGGCTGTGAGCTTCGCGGACGTGGCCGTGTACTTCTGCCGGGAGG  115
            ||||||.|||.||||||||||..||||.|||||.|||||||||||.|||||||||||||||||||.||||||||
Sbjct   75  CGGGGCGGGATCCGAGTGGAGAAAGCCCGGGGCCGTGAGCTTCGCCGACGTGGCCGTGTACTTCTCCCGGGAGG  148

Query  116  AGTGGGGCTGCTTGCGGCCAGCGCAGAGGGCCCTGTACCGGGACGTGATGCGGGAGACCTACGGCCACCTGAGC  189
            |||||||||||.|||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  149  AGTGGGGCTGCCTGCGGCCCGCGCAGAGGGCCCTGTACCGGGACGTGATGCGGGAGACCTACGGCCACCTGGGC  222

Query  190  GCTCTCGGAATCGGAGGCAACAAGCCAGCTCTCATCTCCTGGGTGGAGGAGGAGGCCGAACTGTGGGGTCCGGC  263
            ||.||||||.|||||||||.||||||.||.|||||||||||||||||||||.|||||||||||||||.||||||
Sbjct  223  GCGCTCGGAGTCGGAGGCAGCAAGCCGGCGCTCATCTCCTGGGTGGAGGAGAAGGCCGAACTGTGGGATCCGGC  296

Query  264  TGCCCAGGATCCGGAGGTGGCGAAATGTCAGACACAAACGGACCCAGCAGATTCCAGAAACAAGAAAAAGGAAA  337
            ||||||||||||||||||||||||.||||.||||.||.||||||   |||||||||||||||||.||.||||||
Sbjct  297  TGCCCAGGATCCGGAGGTGGCGAAGTGTCCGACAGAAGCGGACC---CAGATTCCAGAAACAAGGAAGAGGAAA  367

Query  338  GACAAAGGGAAGGGACGGGAGCCCTGGAGAAGCCCGACCCTGTGGCCGCCGGGTCTCCTGGGCTGAAGTCTCCC  411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct  368  GACAAAGGGAAGGGACGGGAGCCCTGGAGAAGCCCGACCCTGTGGCCGCCGGGTCTCCTGGGCTGAAGGCTCCC  441

Query  412  CAAGCCCCCTCGGCCGGGCCCCCTTATGGTTGGGAGCAGCTGTCCAAGGCACCGCACCGGGGACGCCCCTCCCT  485
            ||||||||||..||||||            |.||||||||||||||||||.|.||.||||.|.||||||..|.|
Sbjct  442  CAAGCCCCCTTTGCCGGG------------TTGGAGCAGCTGTCCAAGGCCCGGCGCCGGAGTCGCCCCCGCTT  503

Query  486  CTGTGCCCACCCCCCTGTCCCCCGAGCTGACCAGCGTCATGGCTGCTACGTGTGCGGGAAGAGCTTTGCCTGGC  559
            .|.||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|||||||
Sbjct  504  TTTTGCCCACCCCCCTGTCCCCCGAGCTGACCAGCGTCACGGCTGCTACGTGTGCGGGAAGAGCTTCGCCTGGC  577

Query  560  GCTCCACACTGGTGGAGCACGTCTACAGTCACACTGGCGAGAAGCCCTTCCACTGCACTGACTGCGGCAAGGGC  633
            ||||||||||||||||||||.|.|||||.||||..|||||||||||||||||||||.|.|||||||||||||||
Sbjct  578  GCTCCACACTGGTGGAGCACATTTACAGCCACAGGGGCGAGAAGCCCTTCCACTGCGCAGACTGCGGCAAGGGC  651

Query  634  TTCGGCCACGCTTCCTCCCTGAGCAAACACCGGGCCATCCATCGTGGGGAGCGGCCCCACCGCTGTCTGGAGTG  707
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|||||
Sbjct  652  TTCGGCCACGCTTCCTCCCTGAGCAAACACCGGGCCATCCATCGTGGGGAGCGGCCCCACCGCTGTCCCGAGTG  725

Query  708  TGGCCGGGCCTTCACGCAGCGCTCGGCGCTGACTTCGCACCTGCGCGTCCACACCGGCGAGAAACCCTATGGCT  781
            |||.||||||||||.||..|||.|||||||||||||.|||||||||||.|||||                    
Sbjct  726  TGGTCGGGCCTTCATGCGCCGCACGGCGCTGACTTCTCACCTGCGCGTTCACAC--------------------  779

Query  782  GCGCCGACTGTGGCCGCCGCTTCAGCCAGAGCTCTGCCCTCTACCAGCACCGGCGCGTGCACAGCGGCGAGACC  855
                                                                                      
Sbjct  780  --------------------------------------------------------------------------  779

Query  856  CCCTTCCCCTGCCCGGACTGTGGCCGCGCCTTCGCCTACCCCTCGGACCTGCGGCGCCACGTGCGCACCCACAC  929
                                                                                      
Sbjct  780  --------------------------------------------------------------------------  779

Query  930  CGGCGAGAAGCCCTACCCGTGCCCGGACTGCGGGCGCTGCTTCCGCCAGAGCTCGGAGATGGCAGTCCACAGGC  1003
                                                                                      
Sbjct  780  --------------------------------------------------------------------------  779

Query 1004  GCACCCACAGCGGCGAGAAGCCCTACCCCTGCCCGCAGTGCGGCCGCCGCTTTGGCCAGAAGTCAGCCGTGGCC  1077
                      .||||||||||||||||.||||||||||||.||||||.||||.||||.||||.|.|.|.|||||
Sbjct  780  ----------TGGCGAGAAGCCCTACCGCTGCCCGCAGTGTGGCCGCTGCTTCGGCCTGAAGACCGGCATGGCC  843

Query 1078  AAACACCAGTGGGTTCATCGGCCCGGGGCCGGGGGCCACAGGGGCCGGGTCGCC--GGGCGTCTGTCTGTGACC  1149
            ||.|||||.|||||.|||||||||||||.||.|||.|..|||||||||  ||||  |||.|.||||||||||||
Sbjct  844  AAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGGGCGTAGGGGCCGG--CGCCCTGGGGGGCTGTCTGTGACC  915

Query 1150  CTGACCCCTGGCCACGGAGACCTGGACCCGCCCGTGGGCTTCCAGCTGTACCCGGAGATATTCCAGGAGTGTGG  1223
            |||||.||||.||.|||.||||||||||||||.|||||||||||||||||.||.||||||||||||||.|||||
Sbjct  916  CTGACTCCTGTCCGCGGGGACCTGGACCCGCCTGTGGGCTTCCAGCTGTATCCAGAGATATTCCAGGAATGTGG  989

Query 1224  G  1224
            |
Sbjct  990  G  990