Nucleotide Global Alignment

Description

Query:
ccsbBroad304_09344
Subject:
NM_023931.3
Aligned Length:
1397
Identities:
376
Gaps:
997

Alignment

Query    1  ---------------------------------ATGGCGCCGCCTCTGGCCCCGCTCCCTCCCCGGGACCCAAA  41
                                             |||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGACCGATCCGTCGCTGGGGCTGACAGTCCCCATGGCGCCGCCTCTGGCCCCGCTCCCTCCCCGGGACCCAAA  74

Query   42  CGGGGCCGGACCCGAGTGGAGGGAGCCGGGGGCTGTGAGCTTCGCGGACGTGGCCGTGTACTTCTGCCGGGAGG  115
            ||||||.|||.||||||||||..||||.|||||.|||||||||||.|||||||||||||||||||.||||||||
Sbjct   75  CGGGGCGGGATCCGAGTGGAGAAAGCCCGGGGCCGTGAGCTTCGCCGACGTGGCCGTGTACTTCTCCCGGGAGG  148

Query  116  AGTGGGGCTGCTTGCGGCCAGCGCAGAGGGCCCTGTACCGGGACGTGATGCGGGAGACCTACGGCCACCTGAGC  189
            |||||||||||.|||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  149  AGTGGGGCTGCCTGCGGCCCGCGCAGAGGGCCCTGTACCGGGACGTGATGCGGGAGACCTACGGCCACCTGGGC  222

Query  190  GCTCTC--------------------------------------------------------------------  195
            ||.|||                                                                    
Sbjct  223  GCGCTCGGTGAGAGCCCCACCTGCTTGCCTGGGCCCTGCGCCTCCACAGGCCCTGCCGCGCCTCTGGGAGCTGC  296

Query  196  ------------------------------------------------------------------------GG  197
                                                                                    ||
Sbjct  297  GTGTGGAGTTGGGGGCCCCGGGGCCGGGCAGGCGGCCTCCTCGCAGCGTGGGGTTTGCGTTCTTCTCCCCCAGG  370

Query  198  AATCGGAGGCAACAAGCCAGCTCTCATCTCCTGGGTGGAGGAGGAGGCCGAACTGTGGGGTCCGGCTGCCCAGG  271
            |.|||||||||.||||||.||.|||||||||||||||||||||.|||||||||||||||.||||||||||||||
Sbjct  371  AGTCGGAGGCAGCAAGCCGGCGCTCATCTCCTGGGTGGAGGAGAAGGCCGAACTGTGGGATCCGGCTGCCCAGG  444

Query  272  ATCCGGAGGTGGCGAAATGTCAGACACAAACGGACCCAGCAGATTCCAGAAACAAGAAAAAGGAAAGACAAAGG  345
            ||||||||||||||||.||||.||||.||.||||||||||||||||||||||||||.||.||||||||||||||
Sbjct  445  ATCCGGAGGTGGCGAAGTGTCCGACAGAAGCGGACCCAGCAGATTCCAGAAACAAGGAAGAGGAAAGACAAAGG  518

Query  346  GAAGGGACGGGAGCCCTGGAGAAGCCCGACCCTGTGGCCGCCGGGTCTCCTGGGCTGAAGTCTCCCCAAGCCCC  419
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||                   
Sbjct  519  GAAGGGACGGGAGCCCTGGAGAAGCCCGACCCTGTGGCCGCCGGGTCTCCTGGGC-------------------  573

Query  420  CTCGGCCGGGCCCCCTTATGGTTGGGAGCAGCTGTCCAAGGCACCGCACCGGGGACGCCCCTCCCTCTGTGCCC  493
                                                                                      
Sbjct  574  --------------------------------------------------------------------------  573

Query  494  ACCCCCCTGTCCCCCGAGCTGACCAGCGTCATGGCTGCTACGTGTGCGGGAAGAGCTTTGCCTGGCGCTCCACA  567
                                                                                      
Sbjct  574  --------------------------------------------------------------------------  573

Query  568  CTGGTGGAGCACGTCTACAGTCACACTGGCGAGAAGCCCTTCCACTGCACTGACTGCGGCAAGGGCTTCGGCCA  641
                                                                                      
Sbjct  574  --------------------------------------------------------------------------  573

Query  642  CGCTTCCTCCCTGAGCAAACACCGGGCCATCCATCGTGGGGAGCGGCCCCACCGCTGTCTGGAGTGTGGCCGGG  715
                                                                                      
Sbjct  574  --------------------------------------------------------------------------  573

Query  716  CCTTCACGCAGCGCTCGGCGCTGACTTCGCACCTGCGCGTCCACACCGGCGAGAAACCCTATGGCTGCGCCGAC  789
                                                                                      
Sbjct  574  --------------------------------------------------------------------------  573

Query  790  TGTGGCCGCCGCTTCAGCCAGAGCTCTGCCCTCTACCAGCACCGGCGCGTGCACAGCGGCGAGACCCCCTTCCC  863
                                                                                      
Sbjct  574  --------------------------------------------------------------------------  573

Query  864  CTGCCCGGACTGTGGCCGCGCCTTCGCCTACCCCTCGGACCTGCGGCGCCACGTGCGCACCCACACCGGCGAGA  937
                                                                                      
Sbjct  574  --------------------------------------------------------------------------  573

Query  938  AGCCCTACCCGTGCCCGGACTGCGGGCGCTGCTTCCGCCAGAGCTCGGAGATGGCAGTCCACAGGCGCACCCAC  1011
                                                                                      
Sbjct  574  --------------------------------------------------------------------------  573

Query 1012  AGCGGCGAGAAGCCCTACCCCTGCCCGCAGTGCGGCCGCCGCTTTGGCCAGAAGTCAGCCGTGGCCAAACACCA  1085
                                                                                      
Sbjct  574  --------------------------------------------------------------------------  573

Query 1086  GTGGGTTCATCGGCCCGGGGCCGGGGGCCACAGGGGCCGGGTCGCCGGGCGTCTGTCTGTGACCCTGACCCCTG  1159
                                                                                      
Sbjct  574  --------------------------------------------------------------------------  573

Query 1160  GCCACGGAGACCTGGACCCGCCCGTGGGCTTCCAGCTGTACCCGGAGATATTCCAGGAGTGTGGG  1224
                                                                             
Sbjct  574  -----------------------------------------------------------------  573