Nucleotide Global Alignment

Description

Query:
ccsbBroad304_09518
Subject:
NR_136206.1
Aligned Length:
3534
Identities:
641
Gaps:
2892

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CGGAAGTCGGCGGCGGTGGCGGAGGCGGTGAGTGCGCGGCTCCGGGGCTGGCCGACTCCGCTAGTGGCCCGGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCCTGGGCTCGGGGGCTCCGGGCTCTGGGCTCTGGGTGCGCGGACCGGGCCAGGCTGCTTGAAGACCTCGCGA  148

Query    1  ------------------------------ATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA  44
                                          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCTGTGTCAGCAGAGCCGCCCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA  222

Query   45  AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT  118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT  296

Query  119  GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC  192
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC  370

Query  193  AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGG  266
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct  371  AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCG---  441

Query  267  TGAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGTCCTACCTGAAGAAGGTCTCTATGGAGGGCC  340
                                                                                      
Sbjct  442  --------------------------------------------------------------------------  441

Query  341  ATCTGTACAATGGCTTCAACCTCATAGCAGCCAACCTGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGG  414
                                                                                      
Sbjct  442  --------------------------------------------------------------------------  441

Query  415  AACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCC  488
                                               |||||||||||||||||||||||||||||||||||||||
Sbjct  442  -----------------------------------AGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCC  480

Query  489  CTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATG  562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  481  CTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATG  554

Query  563  TGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATAAAGAGGC-----------------------GCAGCTGC  613
            |||||||||||||||||||||||||||||||||||.|||||||                       ||||||||
Sbjct  555  TGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATGAAGAGGCGTGAGTGGGCGGGTCCTGCTGGGGCAGCTGC  628

Query  614  CAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTG  687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  629  CAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTG  702

Query  688  CGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGA  761
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  703  CGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGA  776

Query  762  GCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGAGTTCACACTGCAGAGC-------  828
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
Sbjct  777  GCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGAGTTCACACTGCAGAGCTAACCCC  850

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct  851  ACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTGCCTTGAGGGGCACTGTGGACAGGAAACCTTCCTTTG  924

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct  925  CCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATCCCCCGGATCAGGGCCCTGTGGTTTGCGTGTTACCCA  998

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct  999  TCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATGCCAGTGAGGAGCAGCAGAGTCTGATACTAGGTCTAG  1072

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1073  GACCGGCCGAGGTATACCATGAACATGTGGATACACCTGAGCCCACTCTTGCACATGTACACAGGCACTCACAT  1146

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1147  GGCACACACATACACTCCTGCGTGTGCACAAGCACACACATGCAAGCCATATACATGGACACCGACACAGGCAC  1220

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1221  ATGTACGTGCACAGGTGTGCTACACATGTGCACACATGCACAGTTGCACAGACACACACACACAGGTGCACACA  1294

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1295  CACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTCTCATGTGCTTCTGGCCAGTAGGTCTTTGTTCTGGTC  1368

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1369  CAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCTCCTCTCCTGTGGCCACAGAACACAGGCGTGCTTGGA  1442

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1443  CTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGCCACATTTGGAATTGGGCACCGAGAAGACCTGAGAAA  1516

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1517  AACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGA  1590

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1591  TCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCAATTCTCCTGCCCCAGCCTCCTGATTAGCTGGGATT  1664

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1665  ACAGGCGTGTGCCACCATGCCCAGCTAATTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGC  1738

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1739  TGGTCTTGAACTCCTGACGTGGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAC  1812

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1813  CACGCCTGGCCGAAAAACCCACTCTCATAACAGAAGTGCAGACTCATTGCTAGATTCAGTGCCCTTGAGTGTGC  1886

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1887  CAGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTGCCAGGAGGCTCCGTGTGCACCAGGGGCTCTCAGAATCC  1960

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1961  CGCTTACCCAGCTGGAGACCATGCCTCTGGCAGCCCCATCTCAGCCAGCCCTGCTCTCTCCCTCTTCCCTCCAG  2034

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2035  GTGAGGCAAACTTCATAGGAATCTGTACCTGAATGTGAGCTCCTGATAATAAAACTCTGAGGCTTTGGTGAGCG  2108

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2109  CATTTCGAGGCCTTTCCCTTGTATGCAGGGTGCCAGTGGGAGCTGCTATGTCTCCTGTGCAGCCAGACACCCTG  2182

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2183  GACGAGGCCCTTCCCACCTCCCCCTTTCCTCACGGCTTCTTCAGCACCACATGTGGATGCCTGTGGGTCAGTCC  2256

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2257  ATCTGTCCATGGGCAGGGGCCGCTGTGAGAGACCCCATGCGCGTGGGATGTGGTAGATGCTGATTATGGGGCCA  2330

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2331  GCCACCCATACAGGTCTATCAGGTCGCAATGGAGGCCCCACTGGAGCGGGAGGCAGGCTGGCCTGGACTTCTGT  2404

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2405  TGGATGATGGGGGCCAGGGGATGGTAGGAGGGGCAGGAGAGCAGGTCTGCATCTGTCTCAGCCCCAGGAGCTCC  2478

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2479  TGGTTTGGGGCCAGCTCTAAGGAGCTTCATCCCTGAGCCTGGCCGAGTATAAGGGGGTCCCGGATATCCAATGC  2552

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2553  TGAGACCTAGACTTTTCTAAGCCTCTGCACCCAACCCCTAACTTGGCCTTTTCAGACCCATGAGAGTGCAGGGT  2626

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2627  GGGTGTGGACCTGCGCCAGGGCTTCCCAGCCTGATTGTGACATGATGTGAGTCCACCTAGGGAGGAGCAGGGGC  2700

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2701  CTCCCCGTCTCTTCCCCTTCTTGCCCAGACCACTTTGCTGGGCTCAGAGCCTTCCATGGCTCACTTTGAACTCA  2774

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2775  GAAGAGTTTCCCAGCTGCGACCCAGGCTGCACCCCCAGGCCTGAGGAGAAACTGAGGCCCCACATCCCATACGT  2848

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2849  GTCCTCTGAGTCAGGACAACAGGCTCCCGGCTGGGGGCACTGCCCTTGCTGCCAACACATTCACCTGCCCCAGT  2922

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2923  GGCTACCATGTCCTGTGCCGGTGACCAGTGCCAGTCCCCAACCTGGATGGTGCCCTGCCCTCATGAAGAGCCCC  2996

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2997  CCGGATGTTCACCTCTGCCCAGAGACCCGGCCTGCCCAGGAAGAGCAGTCTCTGCTCTTGTGTGGGTCCCTCTG  3070

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 3071  CCCCCACCCTGCCCAGGGCTCCCCAGCAGCCTGAGGCCCCTAAGGAAGAACAGCCCTCAATGGTGATTCTATTG  3144

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 3145  GTGTTATGAGTTGTGTCCCCAAAGAGATATATCAGTGTCCTGACCCACAGTACCTCAGAATGTGACTGCATTTG  3218

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 3219  GAGATAGGGTTCTTCCAGGGGTAACCAAGGTAGAATGAGGTCGTTAGTGTGGGCCCTAATCCAATATGACGGCT  3292

Query  829  --------------------------------------------------------  828
                                                                    
Sbjct 3293  ATCCTTATAAAAAGAGGAACATTTAGGCTGGATACAGTGGCTCATGCCTATAATCC  3348

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