Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09518
- Subject:
- NR_136206.1
- Aligned Length:
- 3534
- Identities:
- 641
- Gaps:
- 2892
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAAGTCGGCGGCGGTGGCGGAGGCGGTGAGTGCGCGGCTCCGGGGCTGGCCGACTCCGCTAGTGGCCCGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCTGGGCTCGGGGGCTCCGGGCTCTGGGCTCTGGGTGCGCGGACCGGGCCAGGCTGCTTGAAGACCTCGCGA 148
Query 1 ------------------------------ATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCTGTGTCAGCAGAGCCGCCCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA 222
Query 45 AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT 296
Query 119 GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC 370
Query 193 AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGG 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCG--- 441
Query 267 TGAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGTCCTACCTGAAGAAGGTCTCTATGGAGGGCC 340
Sbjct 442 -------------------------------------------------------------------------- 441
Query 341 ATCTGTACAATGGCTTCAACCTCATAGCAGCCAACCTGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGG 414
Sbjct 442 -------------------------------------------------------------------------- 441
Query 415 AACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCC 488
|||||||||||||||||||||||||||||||||||||||
Sbjct 442 -----------------------------------AGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCC 480
Query 489 CTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATG 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 CTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATG 554
Query 563 TGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATAAAGAGGC-----------------------GCAGCTGC 613
|||||||||||||||||||||||||||||||||||.||||||| ||||||||
Sbjct 555 TGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATGAAGAGGCGTGAGTGGGCGGGTCCTGCTGGGGCAGCTGC 628
Query 614 CAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTG 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 629 CAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTG 702
Query 688 CGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGA 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 703 CGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGA 776
Query 762 GCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGAGTTCACACTGCAGAGC------- 828
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 777 GCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGAGTTCACACTGCAGAGCTAACCCC 850
Query 829 -------------------------------------------------------------------------- 828
Sbjct 851 ACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTGCCTTGAGGGGCACTGTGGACAGGAAACCTTCCTTTG 924
Query 829 -------------------------------------------------------------------------- 828
Sbjct 925 CCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATCCCCCGGATCAGGGCCCTGTGGTTTGCGTGTTACCCA 998
Query 829 -------------------------------------------------------------------------- 828
Sbjct 999 TCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATGCCAGTGAGGAGCAGCAGAGTCTGATACTAGGTCTAG 1072
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1073 GACCGGCCGAGGTATACCATGAACATGTGGATACACCTGAGCCCACTCTTGCACATGTACACAGGCACTCACAT 1146
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1147 GGCACACACATACACTCCTGCGTGTGCACAAGCACACACATGCAAGCCATATACATGGACACCGACACAGGCAC 1220
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1221 ATGTACGTGCACAGGTGTGCTACACATGTGCACACATGCACAGTTGCACAGACACACACACACAGGTGCACACA 1294
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1295 CACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTCTCATGTGCTTCTGGCCAGTAGGTCTTTGTTCTGGTC 1368
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1369 CAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCTCCTCTCCTGTGGCCACAGAACACAGGCGTGCTTGGA 1442
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1443 CTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGCCACATTTGGAATTGGGCACCGAGAAGACCTGAGAAA 1516
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1517 AACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGA 1590
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1591 TCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCAATTCTCCTGCCCCAGCCTCCTGATTAGCTGGGATT 1664
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1665 ACAGGCGTGTGCCACCATGCCCAGCTAATTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGC 1738
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1739 TGGTCTTGAACTCCTGACGTGGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAC 1812
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1813 CACGCCTGGCCGAAAAACCCACTCTCATAACAGAAGTGCAGACTCATTGCTAGATTCAGTGCCCTTGAGTGTGC 1886
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1887 CAGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTGCCAGGAGGCTCCGTGTGCACCAGGGGCTCTCAGAATCC 1960
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1961 CGCTTACCCAGCTGGAGACCATGCCTCTGGCAGCCCCATCTCAGCCAGCCCTGCTCTCTCCCTCTTCCCTCCAG 2034
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2035 GTGAGGCAAACTTCATAGGAATCTGTACCTGAATGTGAGCTCCTGATAATAAAACTCTGAGGCTTTGGTGAGCG 2108
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2109 CATTTCGAGGCCTTTCCCTTGTATGCAGGGTGCCAGTGGGAGCTGCTATGTCTCCTGTGCAGCCAGACACCCTG 2182
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2183 GACGAGGCCCTTCCCACCTCCCCCTTTCCTCACGGCTTCTTCAGCACCACATGTGGATGCCTGTGGGTCAGTCC 2256
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2257 ATCTGTCCATGGGCAGGGGCCGCTGTGAGAGACCCCATGCGCGTGGGATGTGGTAGATGCTGATTATGGGGCCA 2330
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2331 GCCACCCATACAGGTCTATCAGGTCGCAATGGAGGCCCCACTGGAGCGGGAGGCAGGCTGGCCTGGACTTCTGT 2404
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2405 TGGATGATGGGGGCCAGGGGATGGTAGGAGGGGCAGGAGAGCAGGTCTGCATCTGTCTCAGCCCCAGGAGCTCC 2478
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2479 TGGTTTGGGGCCAGCTCTAAGGAGCTTCATCCCTGAGCCTGGCCGAGTATAAGGGGGTCCCGGATATCCAATGC 2552
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2553 TGAGACCTAGACTTTTCTAAGCCTCTGCACCCAACCCCTAACTTGGCCTTTTCAGACCCATGAGAGTGCAGGGT 2626
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2627 GGGTGTGGACCTGCGCCAGGGCTTCCCAGCCTGATTGTGACATGATGTGAGTCCACCTAGGGAGGAGCAGGGGC 2700
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2701 CTCCCCGTCTCTTCCCCTTCTTGCCCAGACCACTTTGCTGGGCTCAGAGCCTTCCATGGCTCACTTTGAACTCA 2774
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2775 GAAGAGTTTCCCAGCTGCGACCCAGGCTGCACCCCCAGGCCTGAGGAGAAACTGAGGCCCCACATCCCATACGT 2848
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2849 GTCCTCTGAGTCAGGACAACAGGCTCCCGGCTGGGGGCACTGCCCTTGCTGCCAACACATTCACCTGCCCCAGT 2922
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2923 GGCTACCATGTCCTGTGCCGGTGACCAGTGCCAGTCCCCAACCTGGATGGTGCCCTGCCCTCATGAAGAGCCCC 2996
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2997 CCGGATGTTCACCTCTGCCCAGAGACCCGGCCTGCCCAGGAAGAGCAGTCTCTGCTCTTGTGTGGGTCCCTCTG 3070
Query 829 -------------------------------------------------------------------------- 828
Sbjct 3071 CCCCCACCCTGCCCAGGGCTCCCCAGCAGCCTGAGGCCCCTAAGGAAGAACAGCCCTCAATGGTGATTCTATTG 3144
Query 829 -------------------------------------------------------------------------- 828
Sbjct 3145 GTGTTATGAGTTGTGTCCCCAAAGAGATATATCAGTGTCCTGACCCACAGTACCTCAGAATGTGACTGCATTTG 3218
Query 829 -------------------------------------------------------------------------- 828
Sbjct 3219 GAGATAGGGTTCTTCCAGGGGTAACCAAGGTAGAATGAGGTCGTTAGTGTGGGCCCTAATCCAATATGACGGCT 3292
Query 829 -------------------------------------------------------- 828
Sbjct 3293 ATCCTTATAAAAAGAGGAACATTTAGGCTGGATACAGTGGCTCATGCCTATAATCC 3348
