Construct: ORF ccsbBroad304_09518

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018525.1_s304c1, BRDN0000400621
Derived from:
ccsbBroadEn_09518
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TANGO2 (128989)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09518
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 128989 TANGO2 transport and golgi organiz... NM_001283106.2 99.7% 99.2% 373G>A;598G>A
2 human 128989 TANGO2 transport and golgi organiz... NM_001283116.2 99.7% 99.2% 373G>A;598G>A
3 human 128989 TANGO2 transport and golgi organiz... NM_152906.7 99.7% 99.2% 373G>A;598G>A
4 human 128989 TANGO2 transport and golgi organiz... NM_001283148.2 91% 71% (many diffs)
5 human 128989 TANGO2 transport and golgi organiz... NM_001283154.2 91% 71% (many diffs)
6 human 128989 TANGO2 transport and golgi organiz... NM_001322142.1 83.9% 83.5% 373G>A;598G>A;710_865del
7 human 128989 TANGO2 transport and golgi organiz... XM_017028577.1 83.9% 83.5% 373G>A;598G>A;710_865del
8 human 128989 TANGO2 transport and golgi organiz... XM_017028578.1 83.9% 83.5% 373G>A;598G>A;710_865del
9 human 128989 TANGO2 transport and golgi organiz... XM_017028579.1 83.9% 83.5% 373G>A;598G>A;710_865del
10 human 128989 TANGO2 transport and golgi organiz... XM_017028580.1 83.9% 83.5% 373G>A;598G>A;710_865del
11 human 128989 TANGO2 transport and golgi organiz... NM_001283129.2 83.1% 80.5% (many diffs)
12 human 128989 TANGO2 transport and golgi organiz... NM_001322143.1 83.1% 80.5% (many diffs)
13 human 128989 TANGO2 transport and golgi organiz... NM_001283179.2 77.4% 77.1% 263_264ins186;412G>A
14 human 128989 TANGO2 transport and golgi organiz... NM_001283186.2 77.4% 77.1% 263_264ins186;412G>A
15 human 128989 TANGO2 transport and golgi organiz... NM_001322163.1 77.4% 77.1% 263_264ins186;412G>A
16 human 128989 TANGO2 transport and golgi organiz... NM_001322166.1 77.4% 77.1% 263_264ins186;412G>A
17 human 128989 TANGO2 transport and golgi organiz... NM_001322167.1 77.4% 77.1% 263_264ins186;412G>A
18 human 128989 TANGO2 transport and golgi organiz... NM_001322144.1 75.7% 56.9% (many diffs)
19 human 128989 TANGO2 transport and golgi organiz... NM_001283199.2 72.7% 72.1% 373G>A;380_381ins225
20 human 128989 TANGO2 transport and golgi organiz... NM_001322141.1 71.6% 69.2% (many diffs)
21 human 128989 TANGO2 transport and golgi organiz... NM_001322148.1 71.4% 65.2% (many diffs)
22 human 128989 TANGO2 transport and golgi organiz... XM_017028587.1 71.4% 65.2% (many diffs)
23 human 128989 TANGO2 transport and golgi organiz... NM_001322169.1 68.7% 50.3% (many diffs)
24 human 128989 TANGO2 transport and golgi organiz... XM_017028585.1 65.1% 64.9% 263_264ins186;412G>A;524_679del
25 human 128989 TANGO2 transport and golgi organiz... XM_017028586.1 65.1% 64.9% 263_264ins186;412G>A;524_679del
26 human 128989 TANGO2 transport and golgi organiz... NM_001283235.2 64.3% 53.1% 0_1ins179;83_84ins115;304G>A
27 human 128989 TANGO2 transport and golgi organiz... NM_001322171.1 64.3% 53.1% 0_1ins179;83_84ins115;304G>A
28 human 128989 TANGO2 transport and golgi organiz... NM_001322172.1 64.3% 53.1% 0_1ins179;83_84ins115;304G>A
29 human 128989 TANGO2 transport and golgi organiz... NM_001322173.1 64.3% 53.1% 0_1ins179;83_84ins115;304G>A
30 human 128989 TANGO2 transport and golgi organiz... NM_001322174.1 64.3% 53.1% 0_1ins179;83_84ins115;304G>A
31 human 128989 TANGO2 transport and golgi organiz... NM_001322175.1 64.3% 53.1% 0_1ins179;83_84ins115;304G>A
32 human 128989 TANGO2 transport and golgi organiz... XM_011529867.1 64.3% 53.1% 0_1ins179;83_84ins115;304G>A
33 human 128989 TANGO2 transport and golgi organiz... XM_024452157.1 64.3% 53.1% 0_1ins179;83_84ins115;304G>A
34 human 128989 TANGO2 transport and golgi organiz... NM_001322145.1 64% 61.4% (many diffs)
35 human 128989 TANGO2 transport and golgi organiz... NM_001322147.1 64% 61.4% (many diffs)
36 human 128989 TANGO2 transport and golgi organiz... NM_001322160.1 63.5% 41.2% (many diffs)
37 human 128989 TANGO2 transport and golgi organiz... XM_011529863.1 63.5% 41.2% (many diffs)
38 human 128989 TANGO2 transport and golgi organiz... XM_017028588.2 61.1% 54.2% 373G>A;451_452ins154;507_508ins167
39 human 128989 TANGO2 transport and golgi organiz... NM_001322146.1 60.9% 55.6% (many diffs)
40 human 128989 TANGO2 transport and golgi organiz... XM_017028581.1 60.9% 55.6% (many diffs)
41 human 128989 TANGO2 transport and golgi organiz... XM_017028582.1 60.9% 55.6% (many diffs)
42 human 128989 TANGO2 transport and golgi organiz... XM_017028583.1 60.9% 55.6% (many diffs)
43 human 128989 TANGO2 transport and golgi organiz... XM_017028584.1 60.9% 55.6% (many diffs)
44 human 128989 TANGO2 transport and golgi organiz... NM_001322149.1 59.9% 57% (many diffs)
45 human 128989 TANGO2 transport and golgi organiz... XM_011529865.1 54.6% 45.8% (many diffs)
46 human 128989 TANGO2 transport and golgi organiz... NM_001322150.1 54.1% 45% (many diffs)
47 human 128989 TANGO2 transport and golgi organiz... NM_001322153.1 54.1% 45% (many diffs)
48 human 128989 TANGO2 transport and golgi organiz... NM_001322155.1 54.1% 45% (many diffs)
49 human 128989 TANGO2 transport and golgi organiz... NM_001283215.2 45.7% 42.3% (many diffs)
50 human 128989 TANGO2 transport and golgi organiz... NM_001283248.2 38.7% 33.6% 265_266ins340;321_322ins167
51 human 128989 TANGO2 transport and golgi organiz... XR_002958662.1 37.8% (many diffs)
52 human 128989 TANGO2 transport and golgi organiz... XR_001755162.1 35.6% (many diffs)
53 human 128989 TANGO2 transport and golgi organiz... XR_001755161.1 35.4% (many diffs)
54 human 128989 TANGO2 transport and golgi organiz... XR_001755163.1 33.3% (many diffs)
55 human 128989 TANGO2 transport and golgi organiz... XR_001755164.1 26.2% (many diffs)
56 human 128989 TANGO2 transport and golgi organiz... NR_136211.1 23.3% (many diffs)
57 human 128989 TANGO2 transport and golgi organiz... NR_136212.1 20% (many diffs)
58 human 128989 TANGO2 transport and golgi organiz... NR_136206.1 18.1% (many diffs)
59 mouse 27883 Tango2 transport and golgi organiz... NM_138583.2 84.4% 86.9% (many diffs)
60 mouse 27883 Tango2 transport and golgi organiz... XM_006522227.2 84.4% 86.9% (many diffs)
61 mouse 27883 Tango2 transport and golgi organiz... XM_006522228.1 84.4% 86.9% (many diffs)
62 mouse 27883 Tango2 transport and golgi organiz... XM_011245929.1 84.4% 86.9% (many diffs)
63 mouse 27883 Tango2 transport and golgi organiz... XM_017317030.1 84.4% 86.9% (many diffs)
64 mouse 27883 Tango2 transport and golgi organiz... XM_017317031.1 84.4% 86.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
894
ORF length:
828
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtg catcatcttc tttaagtttg atcctcgccc tgtttccaaa aacgcgtaca
121ggctcatctt ggcagccaac agggatgaat tctacagccg accctccaag ttagctgact
181tctgggggaa caacaacgag atcctcagtg ggctggacat ggaggaaggc aaggaaggag
241gcacatggct gggcatcagc acacgtggca agctggcagc actcaccaac tacctgcagc
301cgcagctgga ctggcaggcc cgagggcgag gtgaacttgt cacccacttt ctgaccactg
361acgtggacag cttgtcctac ctgaagaagg tctctatgga gggccatctg tacaatggct
421tcaacctcat agcagccaac ctgagcacag caaagggaga cgtcatttgc tactatggga
481accgagggga gcctgatcct atcgttttga cgccaggcac ctacgggctg agcaacgcgc
541tgctggagac tccctggagg aagctgtgct ttgggaagca gctcttcctg gaggctgtgg
601aacggagcca ggcgctgccc aaggatgtgc tcatcgccag cctcctggat gtgctcaaca
661ataaagaggc gcagctgcca gacccggcca tcgaggacca gggtggggag tacgtgcagc
721ccatgctgag caagtacgcg gctgtgtgcg tgcgctgccc tggctacggc accagaacca
781acactatcat cctggtagat gcggacggcc acgtgacctt cactgagcgt agcatgatgg
841acaaggacct ctcccactgg gagaccagaa cctatgagtt cacactgcag agctacccaa
901ctttcttgta caaagtggtt ggtaagccta tccctaaccc tctcctcggt ctcgattcta
961cgtagtaatg agctagcgct aaccggtggc gcgttaagtc gacaatcaac ctctggatta

Download FASTA (ORF) (Full)