Nucleotide Global Alignment

Description

Query:
ccsbBroad304_09518
Subject:
NR_136211.1
Aligned Length:
3534
Identities:
826
Gaps:
2706

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CGGAAGTCGGCGGCGGTGGCGGAGGCGGTGAGTGCGCGGCTCCGGGGCTGGCCGACTCCGCTAGTGGCCCGGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCCTGGGCTCGGGGGCTCCGGGCTCTGGGCTCTGGGTGCGCGGACCGGGCCAGGCTGCTTGAAGACCTCGCGA  148

Query    1  ------------------------------ATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA  44
                                          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCTGTGTCAGCAGAGCCGCCCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA  222

Query   45  AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT  118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT  296

Query  119  GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC  192
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC  370

Query  193  AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGG  266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGG  444

Query  267  TGAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGTCCTACCTGAAGAAGGTCTCTATGGAGGGCC  340
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TGAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGTCCTACCTGAAGAAGGTCTCTATGGAGGGCC  518

Query  341  ATCTGTACAATGGCTTCAACCTCATAGCAGCCAACCTGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGG  414
            ||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ATCTGTACAATGGCTTCAACCTCATAGCAGCCGACCTGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGG  592

Query  415  AACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCC  488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCC  666

Query  489  CTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATG  562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATG  740

Query  563  TGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATAAAGAGGC-----------------------GCAGCTGC  613
            |||||||||||||||||||||||||||||||||||.|||||||                       ||||||||
Sbjct  741  TGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATGAAGAGGCGTGAGTGGGCGGGTCCTGCTGGGGCAGCTGC  814

Query  614  CAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTG  687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTG  888

Query  688  CGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGA  761
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGA  962

Query  762  GCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGAGTTCACACTGCAGAGC-------  828
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
Sbjct  963  GCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGAGTTCACACTGCAGAGCTAACCCC  1036

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1037  ACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTGCCTTGAGGGGCACTGTGGACAGGAAACCTTCCTTTG  1110

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1111  CCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATCCCCCGGATCAGGGCCCTGTGGTTTGCGTGTTACCCA  1184

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1185  TCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATGCCAGTGAGGAGCAGCAGAGTCTGATACTAGGTCTAG  1258

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1259  GACCGGCCGAGGTATACCATGAACATGTGGATACACCTGAGCCCACTCTTGCACATGTACACAGGCACTCACAT  1332

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1333  GGCACACACATACACTCCTGCGTGTGCACAAGCACACACATGCAAGCCATATACATGGACACCGACACAGGCAC  1406

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1407  ATGTACGTGCACAGGTGTGCTACACATGTGCACACATGCACAGTTGCACAGACACACACACACAGGTGCACACA  1480

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1481  CACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTCTCATGTGCTTCTGGCCAGTAGGTCTTTGTTCTGGTC  1554

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1555  CAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCTCCTCTCCTGTGGCCACAGAACACAGGCGTGCTTGGA  1628

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1629  CTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGCCACATTTGGAATTGGGCACCGAGAAGACCTGAGAAA  1702

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1703  AACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGA  1776

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1777  TCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCAATTCTCCTGCCCCAGCCTCCTGATTAGCTGGGATT  1850

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1851  ACAGGCGTGTGCCACCATGCCCAGCTAATTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGC  1924

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1925  TGGTCTTGAACTCCTGACGTGGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAC  1998

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1999  CACGCCTGGCCGAAAAACCCACTCTCATAACAGAAGTGCAGACTCATTGCTAGATTCAGTGCCCTTGAGTGTGC  2072

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2073  CAGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTGCCAGGAGGCTCCGTGTGCACCAGGGGCTCTCAGAATCC  2146

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2147  CGCTTACCCAGCTGGAGACCATGCCTCTGGCAGCCCCATCTCAGCCAGCCCTGCTCTCTCCCTCTTCCCTCCAG  2220

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2221  GTGAGGCAAACTTCATAGGAATCTGTACCTGAATGTGAGCTCCTGATAATAAAACTCTGAGGCTTTGGTGAGCG  2294

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2295  CATTTCGAGGCCTTTCCCTTGTATGCAGGGTGCCAGTGGGAGCTGCTATGTCTCCTGTGCAGCCAGACACCCTG  2368

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2369  GACGAGGCCCTTCCCACCTCCCCCTTTCCTCACGGCTTCTTCAGCACCACATGTGGATGCCTGTGGGTCAGTCC  2442

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2443  ATCTGTCCATGGGCAGGGGCCGCTGTGAGAGACCCCATGCGCGTGGGATGTGGTAGATGCTGATTATGGGGCCA  2516

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2517  GCCACCCATACAGGTCTATCAGGTCGCAATGGAGGCCCCACTGGAGCGGGAGGCAGGCTGGCCTGGACTTCTGT  2590

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2591  TGGATGATGGGGGCCAGGGGATGGTAGGAGGGGCAGGAGAGCAGGTCTGCATCTGTCTCAGCCCCAGGAGCTCC  2664

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2665  TGGTTTGGGGCCAGCTCTAAGGAGCTTCATCCCTGAGCCTGGCCGAGTATAAGGGGGTCCCGGATATCCAATGC  2738

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2739  TGAGACCTAGACTTTTCTAAGCCTCTGCACCCAACCCCTAACTTGGCCTTTTCAGACCCATGAGAGTGCAGGGT  2812

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2813  GGGTGTGGACCTGCGCCAGGGCTTCCCAGCCTGATTGTGACATGATGTGAGTCCACCTAGGGAGGAGCAGGGGC  2886

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2887  CTCCCCGTCTCTTCCCCTTCTTGCCCAGACCACTTTGCTGGGCTCAGAGCCTTCCATGGCTCACTTTGAACTCA  2960

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2961  GAAGAGTTTCCCAGCTGCGACCCAGGCTGCACCCCCAGGCCTGAGGAGAAACTGAGGCCCCACATCCCATACGT  3034

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 3035  GTCCTCTGAGTCAGGACAACAGGCTCCCGGCTGGGGGCACTGCCCTTGCTGCCAACACATTCACCTGCCCCAGT  3108

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 3109  GGCTACCATGTCCTGTGCCGGTGACCAGTGCCAGTCCCCAACCTGGATGGTGCCCTGCCCTCATGAAGAGCCCC  3182

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 3183  CCGGATGTTCACCTCTGCCCAGAGACCCGGCCTGCCCAGGAAGAGCAGTCTCTGCTCTTGTGTGGGTCCCTCTG  3256

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 3257  CCCCCACCCTGCCCAGGGCTCCCCAGCAGCCTGAGGCCCCTAAGGAAGAACAGCCCTCAATGGTGATTCTATTG  3330

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 3331  GTGTTATGAGTTGTGTCCCCAAAGAGATATATCAGTGTCCTGACCCACAGTACCTCAGAATGTGACTGCATTTG  3404

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 3405  GAGATAGGGTTCTTCCAGGGGTAACCAAGGTAGAATGAGGTCGTTAGTGTGGGCCCTAATCCAATATGACGGCT  3478

Query  829  --------------------------------------------------------  828
                                                                    
Sbjct 3479  ATCCTTATAAAAAGAGGAACATTTAGGCTGGATACAGTGGCTCATGCCTATAATCC  3534

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