Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09518
- Subject:
- XR_001755162.1
- Aligned Length:
- 2252
- Identities:
- 802
- Gaps:
- 1437
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCACCCAAGCTGCTGTGTGCAGGAAGGTGTGTGGGCCAGGACGGGGCTGCACAGGCCTGGCACTGCCCTCCAG 74
Query 1 ---------------------ATGTGCATCATCTTCTTTAAGTTTGATCCTCGC------------CCTG---- 37
||| ||.|.||..|| ||||.| ||.|
Sbjct 75 GACAGGGTCACTCAGTGTGGGATG-----------CTGTCAGAATG--CCTCTCGGGGCGGGGACTCCAGTCAA 135
Query 38 TTTCCAAAAACGCG-----------------------TACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCT 88
|.|.||||.|||.| .||||||||||||||||||||||||||||||||||||
Sbjct 136 TGTACAAAGACGTGAAGACTCAGCCACAGAAGGCAGCCACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCT 209
Query 89 ACAGCCGACCCTCCAAGTTAGCTGACTTCTGGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAA 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 210 ACAGCCGACCCTCCAAGTTAGCTGACTTCTGGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAA 283
Query 163 GGCAAGGAAGGAGGCACATGGCTGGGCATCAGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCC 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 284 GGCAAGGAAGGAGGCACATGGCTGGGCATCAGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCC 357
Query 237 GCAGCTGGACTGGCAGGCCCGAGGGCGAGGTGAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGT 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 GCAGCTGGACTGGCAGGCCCGAGGGCGAGGTGAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGT 431
Query 311 CCTACCTGAAGAAGGTCTCTATGGAGGGCCATCTGTACAATGGCTTCAACCTCATAGCAGCCAACCTGAGCACA 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 432 CCTACCTGAAGAAGGTCTCTATGGAGGGCCATCTGTACAATGGCTTCAACCTCATAGCAGCCGACCTGAGCACA 505
Query 385 GCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGCACCTA 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 506 GCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGCACCTA 579
Query 459 CGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTG 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 580 CGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTG 653
Query 533 TGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATAAAGAGGC- 605
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 654 TGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATGAAGAGGCG 727
Query 606 ----------------------GCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCC 657
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 728 TGAGTGGGCGGGTCCTGCTGGGGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCC 801
Query 658 ATGCTGAGCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGT 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 802 ATGCTGAGCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGT 875
Query 732 AGATGCGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAA 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 876 AGATGCGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAA 949
Query 806 CCTATGAGTTCACACTGCAGAGC--------------------------------------------------- 828
|||||||||||||||||||||||
Sbjct 950 CCTATGAGTTCACACTGCAGAGCTAACCCCACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTGCCTTGA 1023
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1024 GGGGCACTGTGGACAGGAAACCTTCCTTTGCCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATCCCCCGG 1097
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1098 ATCAGGGCCCTGTGGTTTGCGTGTTACCCATCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATGCCAGTG 1171
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1172 AGGAGCAGCAGAGTCTGATACTAGGTCTAGGACCGGCCGAGGTATACCATGAACATGTGGATACACCTGAGCCC 1245
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1246 ACTCTTGCACATGTACACAGGCACTCACATGGCACACACATACACTCCTGCGTGTGCACAAGCACACACATGCA 1319
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1320 AGCCATATACATGGACACCGACACAGGCACATGTACGTGCACAGGTGTGCTACACATGTGCACACATGCACAGT 1393
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1394 TGCACAGACACACACACACAGGTGCACACACACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTCTCATGT 1467
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1468 GCTTCTGGCCAGTAGGTCTTTGTTCTGGTCCAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCTCCTCTC 1541
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1542 CTGTGGCCACAGAACACAGGCGTGCTTGGACTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGCCACATT 1615
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1616 TGGAATTGGGCACCGAGAAGACCTGAGAAAAACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTCTTGCTC 1689
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1690 TGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCAATTCT 1763
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1764 CCTGCCCCAGCCTCCTGATTAGCTGGGATTACAGGCGTGTGCCACCATGCCCAGCTAATTTTTGTGTTTTTAGT 1837
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1838 AGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACGTGGTGATCCACCTGCCTCGGCCTCC 1911
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1912 CAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCTGGCCGAAAAACCCACTCTCATAACAGAAGTGCAGACT 1985
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1986 CATTGCTAGATTCAGTGCCCTTGAGTGTGCCAGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTGCCAGGAGG 2059
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2060 CTCCGTGTGCACCAGGGGCTCTCAGAATCCCGCTTACCCAGCTGGAGACCATGCCTCTGGCAGCCCCATCTCAG 2133
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2134 CCAGCCCTGCTCTCTCCCTCTTCCCTCCAGGTGAGGCAAACTTCATAGGAATCTGTACCTGAATGTGAGCTCCT 2207
Query 829 -------------------------------- 828
Sbjct 2208 GATAATAAAACTCTGAGGCTTTGGTGAGCGCA 2239
