Nucleotide Global Alignment

Description

• Query: ccsbBroad304_09677
• Subject: NM_001352809.2
• Aligned Length: 1596
• Identities: 1105
• Gaps: 489

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGTACTCCTTAAGCCCTGACAACCATCTTGAAGATGGAATCATGAATATGGCAAATTTTCTACGGGGCTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGAAGAAAAGGGGATAAAGAACGACAGGCCTGAGGACCAGTTGAGCAAAGAGAAAAAGAAAATTCTTTTCTCCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCTGTGAGGTGTGCAACATCCAGCTGAACTCTGCAGCCCAGGCTCAGGTGCATTCCAACGGCAAATCCCACCGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAACGAGTGAAGCAGCTGAGTGATGGGCAGCCCCCACCACCCGCCCAGGCCAGCCCCAGCAGCAACAGCAGCAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGATAATCAGGGCTGGAGCCAAGTCTCGGTAGCGCTGTGCATTATCCTGGTCACATACTGGAAGTTTTGTTTAT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCAACTTGGTTGCTCTTGAAGCTGGTGAGAGCCCTGCCAGGATGTGGAGTGGACTTCCTAGCAGAGGCAGTACA  444

Query    1  ---------------------------------------------ATGATGCATCCTTCACTGGATATCAAACC  29
                                                         ||||||||.||||||||||||||||||||
Sbjct  445  TGCCACACTACTACCCTTCCTGCTCTTGTGCGCACACCTACCCTGATGATGCAGCCTTCACTGGATATCAAACC  518

Query   30  ATTTATGTCTTTTCCAGTGGACAGTAGTTCTGCTGTTGGGCTCTTTCCAAATTTTAACACAATGGATCCTGTGC  103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ATTTATGTCTTTTCCAGTGGACAGTAGTTCTGCTGTTGGGCTCTTTCCAAATTTTAACACAATGGATCCTGTGC  592

Query  104  AAAAAGCGGTTATTAACCATACATTTGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTCTTGTAATGTC  177
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AAAAAGCGGTTATTAACCATACATTTGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTCTTGTAATGTC  666

Query  178  TGTCAGCTTCGCTTTAACTCAGATAGCCAGGCCGAGGCCCACTACAAAGGAAGTAAACATGCCAAGAAGGTCAA  251
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TGTCAGCTTCGCTTTAACTCAGATAGCCAGGCCGAGGCCCACTACAAAGGAAGTAAACATGCCAAGAAGGTCAA  740

Query  252  AGCACTAGACGCAACGAAAAATAAACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCT  325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGCACTAGACGCAACGAAAAATAAACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCT  814

Query  326  CCATCACTCCAATCACAGGCAACAACTCTGACAAATCAGAAGATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGT  399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CCATCACTCCAATCACAGGCAACAACTCTGACAAATCAGAAGATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGT  888

Query  400  CAGCCATCAAGCTCTGAAAGTGGCTCATTTATCCTCAAATCTGGCACAACACCCCTGCCACCTGGAGCAGCCAC  473
            ||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CAGCCATCAAGCTCTGAAAGTGGCTCATTTCTCCTCAAATCTGGCACAACACCCCTGCCACCTGGAGCAGCCAC  962

Query  474  TTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCCAAAAAATTAC  547
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCCAAAAAATTAC  1036

Query  548  TTTATTGTTCACTATGCAAAGTGGCTGTGAACTCCCTGTCACAGCTAGAGGCACACAACACAGGATCTAAACAC  621
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TTTATTGTTCACTATGCAAAGTGGCTGTGAACTCCCTGTCACAGCTAGAGGCACACAACACAGGATCTAAACAC  1110

Query  622  AAGACCATGGTTGAAGCTCGTAATGGGGCTGGTCCAATTAAATCCTATCCTAGACCTGGATCAAGATTAAAGAT  695
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AAGACCATGGTTGAAGCTCGTAATGGGGCTGGTCCAATTAAATCCTATCCTAGACCTGGATCAAGATTAAAGAT  1184

Query  696  GCAGAATGGCAGTAAGGGGTCAGGACTACAGAACAAGACATTTCATTGTGAAATCTGTGATGTTCATGTTAATT  769
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GCAGAATGGCAGTAAGGGGTCAGGACTACAGAACAAGACATTTCATTGTGAAATCTGTGATGTTCATGTTAATT  1258

Query  770  CAGAAATTCAACTCAAACAGCACATTTCTAGCCGAAGGCATAAAGATCGAGTTGCAGGGAAACCACTGAAGCCA  843
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CAGAAATTCAACTCAAACAGCACATTTCTAGCCGAAGGCATAAAGATCGAGTTGCAGGGAAACCACTGAAGCCA  1332

Query  844  AAATACAGCCCTTACAACAAACTCCAGCGGAGCCCGAGTATTCTAGCAGCAAAACTTGCATTCCAGAAAGATAT  917
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AAATACAGCCCTTACAACAAACTCCAGCGGAGCCCGAGTATTCTAGCAGCAAAACTTGCATTCCAGAAAGATAT  1406

Query  918  GATGAAGCCTTTGGCCCCAGCCTTCCTGTCCTCACCTCTCGCAGCGGCGGCAGCCGTGTCCTCAGCGCTGTCAC  991
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GATGAAGCCTTTGGCCCCAGCCTTCCTGTCCTCACCTCTCGCAGCGGCGGCAGCCGTGTCCTCAGCGCTGTCAC  1480

Query  992  TCCCACCCCGGCCCTCTGCCTCGCTCTTCCAGGCTCCAGCCATTCCTCCAGCTCTTCTGAGGCCTGGGCATGGG  1065
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TCCCACCCCGGCCCTCTGCCTCGCTCTTCCAGGCTCCAGCCATTCCTCCAGCTCTTCTGAGGCCTGGGCATGGG  1554

Query 1066  CCCATCCGCGCCACTCCTGCCTCCATCCTCTTTGCTCCGTAC  1107
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CCCATCCGCGCCACTCCTGCCTCCATCCTCTTTGCTCCGTAC  1596