Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09677
- Subject:
- XM_011510723.2
- Aligned Length:
- 1533
- Identities:
- 494
- Gaps:
- 1011
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGTACTCCTTAAGCCCTGACAACCATCTTGAAGATGGAATCATGAATATGGCAAATTTTCTACGGGGCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAAGAAAAGGGGATAAAGAACGACAGGCCTGAGGACCAGTTGAGCAAAGAGAAAAAGAAAATTCTTTTCTCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTGTGAGGTGTGCAACATCCAGCTGAACTCTGCAGCCCAGGCTCAGGTGCATTCCAACGGCAAATCCCACCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACGAGTGAAGCAGCTGAGTGATGGGCAGCCCCCACCACCCGCCCAGGCCAGCCCCAGCAGCAACAGCAGCAC 296
Query 1 -------------------------------------------------------ATGATGCATCCTTCACTGG 19
||||||||.||||||||||
Sbjct 297 AGGCAGTACATGCCACACTACTACCCTTCCTGCTCTTGTGCGCACACCTACCCTGATGATGCAGCCTTCACTGG 370
Query 20 ATATCAAACCATTTATGTCTTTTCCAGTGGACAGTAGTTCTGCTGTTGGGCTCTTTCCAAATTTTAACACA--- 90
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATATCAAACCATTTATGTCTTTTCCAGTGGACAGTAGTTCTGCTGTTGGGCTCTTTCCAAATTTTAACACAAAA 444
Query 91 ------------------------------------ATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATT 128
||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGAAGAGGCTTATTTGAGACCAATAAATTTTGCCAGATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATT 518
Query 129 TGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATA 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATA 592
Query 203 GCCAGGCCGAGGCCCACTACAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCACTAGACGCAACGAAAAATAAA 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCCAGGCCGAGGCCCACTACAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCACTAGACGCAACGAAAAATAAA 666
Query 277 CCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCTCCATCACTCCAATCACAGGCAACAA 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCTCCATCACTCCAATCACAGGCAACAA 740
Query 351 CTCTGACAAATCAGAAGAT----AAA-----GGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTG 415
|||||||||||||||..|| ||| .||| ||| |||| |.||||| |.|.||
Sbjct 741 CTCTGACAAATCAGAGCATTTGGAAAACACCAGGA---TAA-----AGCA-TACCAGT----------GGTGTG 795
Query 416 AAAGTGGCTCATTTATCCTCAAATCTGGCACAACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGC 489
|| ||| ||.|| ||| |.|| ||||.|
Sbjct 796 AA-----------------CAA----GGAAC-----------------GAG-----AATT--------AAGATC 818
Query 490 ACAAATGGAGCTCCCGGTACTGTTGTTGAATCAGA-AGAAGAAAAAGCCAAA---AAATTAC----TTTATTGT 555
..||| |||.| || |||.||||| |||| .||..|| |.|.||.|
Sbjct 819 TAAAA-------CCCAG----------------GAGAGAGGAAAA---CAAATCTCAACCACAGCATCTCTTCT 866
Query 556 TCA----CTATGCAAAGTGG----CTGTGAACTCCCTG---TCACAGCTAGAGGCACACAACACAGGATCTAAA 618
||| |||| |||| ||.| ||.|||| ||.|.|||
Sbjct 867 TCAGTACCTAT-----GTGGTGGTCTTT---CTTCCTGCATTCTCTGCT------------------------- 907
Query 619 CACAAGACCATGGTTGAAGCTCGTAATGGGGCTGGTCCA----ATTAAATCCTA--TCCTAG-ACCTGGA-TCA 684
||.| ||| ||| .||| ||.| |||||| |||||.| ||
Sbjct 908 --------------------TCCT-------CTG--CCACTCTTTTA---CCCACCTCCTAGTACCTGTAGTC- 948
Query 685 AGATTAAAGATGCAGAATGGCAGTAAGGGGTCAGGACTACAGAACAAGACATTTCATTGTGAAATCTGTGATGT 758
Sbjct 949 -------------------------------------------------------------------------- 948
Query 759 TCATGTTAATTCAGAAATTCAACTCAAACAGCACATTTCTAGCCGAAGGCATAAAGATCGAGTTGCAGGGAAAC 832
Sbjct 949 -------------------------------------------------------------------------- 948
Query 833 CACTGAAGCCAAAATACAGCCCTTACAACAAACTCCAGCGGAGCCCGAGTATTCTAGCAGCAAAACTTGCATTC 906
Sbjct 949 -------------------------------------------------------------------------- 948
Query 907 CAGAAAGATATGATGAAGCCTTTGGCCCCAGCCTTCCTGTCCTCACCTCTCGCAGCGGCGGCAGCCGTGTCCTC 980
Sbjct 949 -------------------------------------------------------------------------- 948
Query 981 AGCGCTGTCACTCCCACCCCGGCCCTCTGCCTCGCTCTTCCAGGCTCCAGCCATTCCTCCAGCTCTTCTGAGGC 1054
Sbjct 949 -------------------------------------------------------------------------- 948
Query 1055 CTGGGCATGGGCCCATCCGCGCCACTCCTGCCTCCATCCTCTTTGCTCCGTAC 1107
Sbjct 949 ----------------------------------------------------- 948
