Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09677
- Subject:
- XM_017003441.2
- Aligned Length:
- 1494
- Identities:
- 494
- Gaps:
- 972
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGTACTCCTTAAGCCCTGACAACCATCTTGAAGATGGAATCATGAATATGGCAAATTTTCTACGGGGCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAAGAAAAGGGGATAAAGAACGACAGGCCTGAGGACCAGTTGAGCAAAGAGAAAAAGAAAATTCTTTTCTCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTGTGAGGTGTGCAACATCCAGCTGAACTCTGCAGCCCAGGCTCAGGTGCATTCCAACGGCAAATCCCACCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACGAGTGAAGCAGCTGAGTGATGGGCAGCCCCCACCACCCGCCCAGGCCAGCCCCAGCAGCAACAGCAGCAC 296
Query 1 -------------------------------------------------------ATGATGCATCCTTCACTGG 19
||||||||.||||||||||
Sbjct 297 AGGCAGTACATGCCACACTACTACCCTTCCTGCTCTTGTGCGCACACCTACCCTGATGATGCAGCCTTCACTGG 370
Query 20 ATATCAAACCATTTATGTCTTTTCCAGTGGACAGTAGTTCTGCTGTTGGGCTCTTTCCAAATTTTAACACAATG 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATATCAAACCATTTATGTCTTTTCCAGTGGACAGTAGTTCTGCTGTTGGGCTCTTTCCAAATTTTAACACAATG 444
Query 94 GATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTC 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTC 518
Query 168 TTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATAGCCAGGCCGAGGCCCACTACAAAGGAAGTAAACATGCCA 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATAGCCAGGCCGAGGCCCACTACAAAGGAAGTAAACATGCCA 592
Query 242 AGAAGGTCAAAGCACTAGACGCAACGAAAAATAAACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAAT 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGAAGGTCAAAGCACTAGACGCAACGAAAAATAAACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAAT 666
Query 316 CCCAGCTGCTCCATCACTCCAATCACAGGCAACAACTCTGACAAATCAGAAGAT----AAA-----GGGAAGTT 380
||||||||||||||||||||||||||||||||||||||||||||||||||..|| ||| .||| |
Sbjct 667 CCCAGCTGCTCCATCACTCCAATCACAGGCAACAACTCTGACAAATCAGAGCATTTGGAAAACACCAGGA---T 737
Query 381 AAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCTCATTTATCCTCAAATCTGGCACAACACCCC 454
|| |||| |.||||| |.|.|||| ||| ||.||
Sbjct 738 AA-----AGCA-TACCAGT----------GGTGTGAA-----------------CAA----GGAAC-------- 766
Query 455 TGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTACTGTTGTTGAATCAGA-AGA 527
||| |.|| ||||.|..||| |||.| || |||
Sbjct 767 ---------GAG-----AATT--------AAGATCTAAAA-------CCCAG----------------GAGAGA 795
Query 528 AGAAAAAGCCAAA---AAATTAC----TTTATTGTTCA----CTATGCAAAGTGG----CTGTGAACTCCCTG- 585
.||||| |||| .||..|| |.|.||.|||| |||| |||| ||.| ||.||||
Sbjct 796 GGAAAA---CAAATCTCAACCACAGCATCTCTTCTTCAGTACCTAT-----GTGGTGGTCTTT---CTTCCTGC 858
Query 586 --TCACAGCTAGAGGCACACAACACAGGATCTAAACACAAGACCATGGTTGAAGCTCGTAATGGGGCTGGTCCA 657
||.|.||| ||.| ||| |||
Sbjct 859 ATTCTCTGCT---------------------------------------------TCCT-------CTG--CCA 878
Query 658 ----ATTAAATCCTA--TCCTAG-ACCTGGA-TCAAGATTAAAGATGCAGAATGGCAGTAAGGGGTCAGGACTA 723
.||| ||.| |||||| |||||.| ||
Sbjct 879 CTCTTTTA---CCCACCTCCTAGTACCTGTAGTC---------------------------------------- 909
Query 724 CAGAACAAGACATTTCATTGTGAAATCTGTGATGTTCATGTTAATTCAGAAATTCAACTCAAACAGCACATTTC 797
Sbjct 910 -------------------------------------------------------------------------- 909
Query 798 TAGCCGAAGGCATAAAGATCGAGTTGCAGGGAAACCACTGAAGCCAAAATACAGCCCTTACAACAAACTCCAGC 871
Sbjct 910 -------------------------------------------------------------------------- 909
Query 872 GGAGCCCGAGTATTCTAGCAGCAAAACTTGCATTCCAGAAAGATATGATGAAGCCTTTGGCCCCAGCCTTCCTG 945
Sbjct 910 -------------------------------------------------------------------------- 909
Query 946 TCCTCACCTCTCGCAGCGGCGGCAGCCGTGTCCTCAGCGCTGTCACTCCCACCCCGGCCCTCTGCCTCGCTCTT 1019
Sbjct 910 -------------------------------------------------------------------------- 909
Query 1020 CCAGGCTCCAGCCATTCCTCCAGCTCTTCTGAGGCCTGGGCATGGGCCCATCCGCGCCACTCCTGCCTCCATCC 1093
Sbjct 910 -------------------------------------------------------------------------- 909
Query 1094 TCTTTGCTCCGTAC 1107
Sbjct 910 -------------- 909
