Nucleotide Global Alignment

Description

Query:
ccsbBroad304_09691
Subject:
NR_046429.2
Aligned Length:
2011
Identities:
255
Gaps:
1756

Alignment

Query    1  -----------------ATGGCTCGCAGACACTGCTTCTCCTACTGGTTACTGGTATGCTGGTTGGTGGTAACT  57
                             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ACTGCTCAGTAGAAGCCATGGCTCGCAGACACTGCTTCTCCTACTGGTTACTGGTATGCTGGTTGGTGGTAACT  74

Query   58  GTGGCAG-------------------------------------------------------------------  64
            |||||||                                                                   
Sbjct   75  GTGGCAGAAGCACTGTCCACTTTCTATCTCCAGCAGCATATTAATTTGCACATGCCAGGATGGTCTCGATCTCC  148

Query   65  --------------------------------------------------------------------------  64
                                                                                      
Sbjct  149  TGACCTCGTGATCTGCCAGCCTCGGCCTCCCAAAGTTCTGGGATTACAGGCATGAGCCACAGCGCCCGGCCAAA  222

Query   65  --------------AAGGACAAGAAGAGGTATTTACGCCTCCTGGAGATTCACAAAATAATGCGGACGCTACCG  124
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATCCGCACATCTTAAAGGACAAGAAGAGGTATTTACGCCTCCTGGAGATTCACAAAATAATGCGGACGCTACCG  296

Query  125  ACTGCCAGATCTTTACACTCACCCCTCCACCTGCCCCGAGGAGTCCGGTCACAAGGGCCCAGCCCATCACAAAG  198
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ACTGCCAGATCTTTACACTCACCCCTCCACCTGCCCCGAGGAGTCCGGTCACAAGGGCCCAGCCCATCACAAAG  370

Query  199  ACACCCAGGTGTCCCTTCCATTTTTTTCCACGAAGGCCCAGAATCCATTTTAGGTTTCCAAACAGACCTTTCGT  272
            ||||||                                                                    
Sbjct  371  ACACCC--------------------------------------------------------------------  376

Query  273  CCCTTCAAGGTGTAACCACCGTTTTCCATTCCAGCCATTTTATTGGCCACACCGTTACCTTACTTATAGGTATT  346
                                                                               |||||||
Sbjct  377  -------------------------------------------------------------------AGGTATT  383

Query  347  TCCCCAGAAGAAGACTCCAGAGAGGAAGCTCATCTGAGGAAAGC------------------------------  390
            ||||||||||||||||||||||||||||||||||||||||||||                              
Sbjct  384  TCCCCAGAAGAAGACTCCAGAGAGGAAGCTCATCTGAGGAAAGCTGAGAGGGAAGAGAAACCCAAACATACTGA  457

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct  458  AGCAAAAAAAAGCCTATCCTTCAGAAAAAAGCAACAAAAAGATTTCTGTTTTATCTTTCGAAACTAAAACTATT  531

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct  532  GGATTTGAAGATTAAGTATCCTAAACATCACTGACTAGAAACTGTTCTCTTTGTCAGCAGTGAAGATATTGGAT  605

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct  606  CATAGGTTATTGATGGTTGCAAAATTGGACAATAACCACGTTATTTTTATCCTCAACCTCTTATGGTCACAGGA  679

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct  680  TATTTATGCAAATAAAATCTTTAAATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATGCTGAGAGAATCCA  753

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct  754  TCTCCTCCTCTAAATTAAACAGGATTTAAATAAATTGAGATCATTATAAACCACACGAAGAAACTGATGACACC  827

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct  828  GTTTTTATACTCATTGGAAAACATACAGAGCAAGGTGCATTGACAAAGTAAACTTTAAAAGAAATTATAAAGCT  901

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct  902  TAAAGCAATTAAAAAGTTATGAGGAGTCTGACTGTAGCTAATACTTTAAAGATATAAACTGACTTGTCTAACCC  975

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct  976  AAATAATAATAATTATTATTATTTTCTTGGAGACAGAATTTCACTCTTGTTACCCAGGCTGGAGTTTAGTGGTG  1049

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1050  CTGTCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCTTGCCTCAGCCTCCCAAGTAGCTGGG  1123

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1124  ATTATAGGTGCTCGCTACCAAGCCTGGCCAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCC  1197

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1198  AGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCACCTCGGCCTCCCAGAGTGCTGGGATTACAGGCATG  1271

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1272  AGTCACTGCGCCCAGCCCCAAATAATTACTTTTAAACTATAGTATCTAAATTTACTTTAATGTTGACTTCAACT  1345

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1346  GATGCAAATTAATTTGATAATTTTCTCACTGTTTCCCGTTATCATTACATAGATGCTGGCTAAAATAATATACT  1419

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1420  TCCTCTCAAACTTTTAACGTAATTCCAGGTTCAAAATGCCTGATTAAACTGCTACAAGAATATTCTGGTACCTC  1493

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1494  TAGAACTCCACAGAGATAAGTTCACTCAACTCTTGGAACCTTGTATTCTCAGGGTGCAATATGAGAAACAAATC  1567

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1568  CCACAGATTGCATTGATTGGTTATTTGTTTTGGCCACTCTGTAAAACACATCTTCCTGTTTATGCCACTTATCT  1641

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1642  TGCCTGTAACATAAGAACTTTAGTTCTGCATATGTGGTCAGTGGTTTGCACTTTTTCCTCCCAAGATCTACATG  1715

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1716  CAAAAGTTGCTGTTGCTGCTGCTGCTACAAAAACAGAAAAAAAAAAATCAGGATGAAGACATGAAAGGACTTTG  1789

Query  391  --------------------------------------------------------------------------  390
                                                                                      
Sbjct 1790  GGAATGGTTGCCCTAAAAAAGGAAAGAGAGATAAAATCATCATGCTATGTTTCTTTGCTTTATTAAAATGATCA  1863

Query  391  -------------  390
                         
Sbjct 1864  AAAAAGAAAAAAA  1876

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