Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09738
- Subject:
- XM_011521307.3
- Aligned Length:
- 1765
- Identities:
- 1250
- Gaps:
- 488
Alignment
Query 1 ATGGATATTATAAAGGGAAACCTAGATGGAATTTCAAAACCAGCTTCAAATTCAAGAATACGCCCTGGGAGCAG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGATATTATAAAGGGAAACCTAGATGGAATTTCAAAACCAGCTTCAAATTCAAGAATACGCCCTGGGAGCAG 74
Query 75 AAGTTCAAATGCTTCTTTGGAGGTGCTCTCAACAGAACCAGGATCCTTCAAGGTCGATACTGCAAGCAACTTGA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AAGTTCAAATGCTTCTTTGGAGGTGCTCTCAACAGAACCAGGATCCTTCAAGGTCGATACTGCAAGCAACTTGA 148
Query 149 ACTCTGGTAAAGAGGACCACTCCGAAAGCAGTAATACAGAGAACAGAAGAACTAGTAATGATGATAAGCAGGAA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACTCTGGTAAAGAGGACCACTCCGAAAGCAGTAATACAGAGAACAGAAGAACTAGTAATGATGATAAGCAGGAA 222
Query 223 AGCTGCTCTGAGAAAATAAAATTGGCTGAAGAGGGATCAGATGAAGATCTGGATTTGGTTCAACATCAGATAAT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGCTGCTCTGAGAAAATAAAATTGGCTGAAGAGGGATCAGATGAAGATCTGGATTTGGTTCAACATCAGATAAT 296
Query 297 CTCTGAGTGTTCAGATGAACCCAAATTAAAAGAATTAGATTCTCAACTTCAAGATGCTATTCAGAAGATGAAAA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTCTGAGTGTTCAGATGAACCCAAATTAAAAGAATTAGATTCTCAACTTCAAGATGCTATTCAGAAGATGAAAA 370
Query 371 AACTTGATAAAATATTGGCAAAGAAACAACGCAGAGAAAAAGAAATTAAGAAGCAAGGTCTAGAAATGAGAATA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AACTTGATAAAATATTGGCAAAGAAACAACGCAGAGAAAAAGAAATTAAGAAGCAAGGTCTAGAAATGAGAATA 444
Query 445 AAGCTGTGGGAAGAAATTAAGTCTGCAAAATATAGTGAAGCTTGGCAAAGTAAAGAGGAGATGGAAAATACAAA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGCTGTGGGAAGAAATTAAGTCTGCAAAATATAGTGAAGCTTGGCAAAGTAAAGAGGAGATGGAAAATACAAA 518
Query 519 AAAATTTTTATCTTTGACTGCTGTTTCTGAAGAAACTGTTGGTCCTTCTCATGAGGAGGAAGACACCTTTTCCT 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAAATTTTTATCTTTGACTGCTGTTTCTGAAGAAACTGTTGGTCCTTCTCATGAGGAGGAAGACACCTTTTCCT 592
Query 593 CAGTGTTTCATACTCAAATCCCTCCAGAAGAATATGAAATGCAGATGCAGAAACTCAATAAAGATTTTACCTGT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CAGTGTTTCATACTCAAATCCCTCCAGAAGAATATGAAATGCAGATGCAGAAACTCAATAAAGATTTTACCTGT 666
Query 667 GATGTGGAAAGAAATGAGTCATTGATCAAATCAGGAAAGAAACCTTTCTCGAATACAGAAAAGATTGAGCTCAG 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GATGTGGAAAGAAATGAGTCATTGATCAAATCAGGAAAGAAACCTTTCTCGAATACAGAAAAGATTGAGCTCAG 740
Query 741 GGGTAAACACAACCAGGATTTTATTAAGAGAAACATTGAGTTGGCCAAGGAATCAAGAAACCCAGTGGTTATGG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGGTAAACACAACCAGGATTTTATTAAGAGAAACATTGAGTTGGCCAAGGAATCAAGAAACCCAGTGGTTATGG 814
Query 815 TTGACAGAGAGAAGAAAAGGCTGGTTGAGCTTTTGAAGGACTTGGATGAGAAAGATTCCGGGCTCTCCAGTTCT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTGACAGAGAGAAGAAAAGGCTGGTTGAGCTTTTGAAGGACTTGGATGAGAAAGATTCCGGGCTCTCCAGTTCT 888
Query 889 GAGGGTGATCAGTCTGGCTGGGTGGTCCCAGTAAAAGGATATGAACTTGCAGTCACCCAGCATCAGCAGCTTGC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAGGGTGATCAGTCTGGCTGGGTGGTCCCAGTAAAAGGATATGAACTTGCAGTCACCCAGCATCAGCAGCTTGC 962
Query 963 TGAAATTGATATAAAACTCCAAGAACTCTCTGCAGCCTCCCCTACAATTTCCAGTTTTTCTCCAAGACTTGAAA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGAAATTGATATAAAACTCCAAGAACTCTCTGCAGCCTCCCCTACAATTTCCAGTTTTTCTCCAAGACTTGAAA 1036
Query 1037 ATCGGAATAATCAGAAACCTGACCATGATGGTGAAAGAAATATGGAAGTAACTCCAGGAGAAAAGATACTTAGG 1110
||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATCGGAATAATCAGAAACCTGACCGTGATGGTGAAAGAAATATGGAAGTAACTCCAGGAGAAAAGATACTTAGG 1110
Query 1111 AACACCAAAGAGCAACGCGATCTGCATAATCGGCTGAGAGAGATTGATGAAAAGCTGAAAATGATGAAGGAAAA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AACACCAAAGAGCAACGCGATCTGCATAATCGGCTGAGAGAGATTGATGAAAAGCTGAAAATGATGAAGGAAAA 1184
Query 1185 TGTG-------TTA------GAGTCCAC-----ATCACGTCTCTCTGAAGAACA-GTTAAAGTGTCTTCTGGAT 1239
|||| ||| |||| .|| |..|||..|.|..||||.||| |..|.||||||||
Sbjct 1185 TGTGGCTTTTCTTAACTTGGGAGT-GACGAGCGAAGACGAATTTGGGAAGCACAGGGCAGAGTGTCTT------ 1251
Query 1240 GAATGCATACTTAAACAAAAATCCATCATTAAACTTTCTTCAGAAAGAAAAAAGGAAGACATTGAGGACGTAAC 1313
|.|.|||.|||| ||..|| |..||..||||.|.|| ||
Sbjct 1252 -ACTTCATTCTTA----------------TATGCT-------------------GCTGAGCTTGATGTCG--AC 1287
Query 1314 AC---CTGTGTTCCCCCAGCTTTCCAGGTCCATCATCTCTAAATTGCTAAATGAATCAGAAACAAAGGTCCAGA 1384
.| .|||.||
Sbjct 1288 TCAGTTTGTATT-------------------------------------------------------------- 1299
Query 1385 AAACTGAGGTAGAAGATGCAGATATGCTTGAGAGTGAAGAATGTGAAGCTTCTAAAGGCTACTATCTCACTAAA 1458
Sbjct 1300 -------------------------------------------------------------------------- 1299
Query 1459 GCCTTGACTGGACATAATATGTCAGAAGCTCTTGTCACTGAAGCAGAGAATATGAAATGCCTTCAATTTTCCAA 1532
Sbjct 1300 -------------------------------------------------------------------------- 1299
Query 1533 GGACGTTATTATTAGTGACACAAAAGACTATTTTATGTCGAAGACTCTTGGCATTGGGAGACTGAAAAGGCCCT 1606
Sbjct 1300 -------------------------------------------------------------------------- 1299
Query 1607 CCTTCTTAGATGATCCACTGTATGGTATCAGTGTGAGCCTTTCATCAGAAGACCAACATCTGAAACTCAGTTCT 1680
Sbjct 1300 -------------------------------------------------------------------------- 1299
Query 1681 CCAGAGAATACAATAGCAGATGAGCAGGAGACTAAAGATGCAGCAGAAGAATGTAAAGAACCC 1743
Sbjct 1300 --------------------------------------------------------------- 1299
