Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09742
- Subject:
- NM_001370553.1
- Aligned Length:
- 1428
- Identities:
- 1155
- Gaps:
- 267
Alignment
Query 1 ATGCCAGCTCCCCAGCGGAAGCACAGGCGTGGAGGCTTCTCTCACAGATGTTTCCCCACCCCGCAGACGGCGAT 74
||
Sbjct 1 ------------------------------------------------------------------------AT 2
Query 75 GACCCCCCAGCCCGCCGGACCCCCGGATGGGGGCTGGGGCTGGGTGGTGGCGGCCGCAGCCTTCGCGATAAACG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3 GACCCCCCAGCCCGCCGGACCCCCGGATGGGGGCTGGGGCTGGGTGGTGGCGGCCGCAGCCTTCGCGATAAACG 76
Query 149 GGCTGTCCTACGGGCTGCTGCGCTCGCTGGGCCTTGCCTTCCCTGACCTTGCCGAGCACTTTGACCGAAGCGCC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 77 GGCTGTCCTACGGGCTGCTGCGCTCGCTGGGCCTTGCCTTCCCTGACCTTGCCGAGCACTTTGACCGAAGCGCC 150
Query 223 CAGGACACTGCGTGGATCAGCGCCCTGGCCCTGGCCGTGCAGCAGGCAGCCAGCCCTGTGGGCAGCGCCCTGAG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 151 CAGGACACTGCGTGGATCAGCGCCCTGGCCCTGGCCGTGCAGCAGGCAGCCAGCCCCGTGGGCAGCGCCCTGAG 224
Query 297 CACGCGCTGGGGGGCCCGCCCCGTGGTGATGGTTGGGGGCGTCCTCGCCTCGCTGGGCTTCGTCTTCTCGGCTT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 225 CACGCGCTGGGGGGCCCGCCCCGTGGTGATGGTTGGGGGCGTCCTCGCCTCGCTGGGCTTCGTCTTCTCGGCTT 298
Query 371 TCGCCAGCGATCTGCTGCATCTCTACCTCGGCCTGGGCCTCCTCGCTGGCTTTGGTTGGGCCCTGGTGTTCGCC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 299 TCGCCAGCGATCTGCTGCATCTCTACCTCGGCCTGGGCCTCCTCGCTGGCTTTGGTTGGGCCCTGGTGTTCGCC 372
Query 445 CCCGCCCTAGGCACCCTCTCGCGTTACTTCTCCCGCCGTCGAGTCTTGGCGGTGGGGCTGGCGCTCACCGGCAA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 373 CCCGCCCTAGGCACCCTCTCGCGTTACTTCTCCCGCCGTCGAGTCTTGGCGGTGGGGCTGGCGCTCACCGGCAA 446
Query 519 CGGGGCCTCCTCGCTGCTCCTGGCGCCCGCCTTGCAGCTTCTTCTCGATACTTTCGGCTGGCGGGGCGCTCTGC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 447 CGGGGCCTCCTCGCTGCTCCTGGCGCCCGCCTTGCAGCTTCTTCTCGATACTTTCGGCTGGCGGGGCGCTCTGC 520
Query 593 TCCTCCTCGGCGCGATCACCCTCCACCTCACCCCCTGTGGCGCCCTGCTGCTACCCCTGGTCCTTCCTGGAGAC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 521 TCCTCCTCGGCGCGATCACCCTCCACCTCACCCCCTGTGGCGCCCTGCTGCTACCCCTGGTCCTTCCTGGAGAC 594
Query 667 CCCCCAGCCCCACCGCGTAGTCCCCTAGCTGCCCTCGGCCTGAGTCTGTTCACACGCCGGGCCTTCTCAATCTT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 595 CCCCCAGCCCCACCGCGTAGTCCCCTAGCTGCCCTCGGCCTGAGTCTGTTCACACGCCGGGCCTTCTCAATCTT 668
Query 741 TGCTCTAGGCACAGCCCTGGTTGGGGGCGGGTACTTCGTTCCTTACGTGCACTTGGCTCCCCACGCTTTAGACC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 TGCTCTAGGCACAGCCCTGGTTGGGGGCGGGTACTTCGTTCCTTACGTGCACTTGGCTCCCCACGCTTTAGACC 742
Query 815 GGGGCCTGGGGGGATACGGAGCAGCGCTGGTGGTGGCCGTGGCTGCGATGGGGGATGCGGGCGCCCGGCTGGTC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 743 GGGGCCTGGGGGGATACGGAGCAGCGCTGGTGGTGGCCGTGGCTGCGATGGGGGATGCGGGCGCCCGGCTGGTC 816
Query 889 TGCGGGTGGCTGGCAGACCAAGGCTGGGTGCCCCTCCCGCGGCTGCTGGCCGTATTCGGGGCTCTGACTGGGCT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 817 TGCGGGTGGCTGGCAGACCAAGGCTGGGTGCCCCTCCCGCGGCTGCTGGCCGTATTCGGGGCTCTGACTGGGCT 890
Query 963 GGGGCTGTGGGTGGTGGGGCTGGTGCCCGTGGTGGGCGGCGAAGAGAGCTGGGGGGGTCCCCTGCTGGCCGCGG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 891 GGGGCTGTGGGTGGTGGGGCTGGTGCCCGTGGTGGGCGGCGAAGAGAGCTGGGGGGGTCCCCTGCTGGCCGCGG 964
Query 1037 CTGTGGCCTATGGGCTGAGCGCGGGGAGTTACGCCCCGCTGGTTTTCGGTGTACTCCCCGGGCTGGTGGGCGTC 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 965 CTGTGGCCTATGGGCTGAGCGCGGGGAGTTACGCCCCGCTGGTTTTCGGTGTACTCCCCGGGCTGGTGGGCGTC 1038
Query 1111 GGAGGTGTGGTGCAGGCCACAGGGCTGGTGATGATGCTGATGAGCCTCGGGGGGCTCCTGGGCCCTCCCCTGTC 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1039 GGAGGTGTGGTGCAGGCCACAGGGCTGGTGATGATGCTGATGAGCCTCGGGGGGCTCCTGGGCCCTCCCCTGTC 1112
Query 1185 AGGCTTCCTAAGGGA--TGAG---ACAGGAGACTTCA-CCGCCT----CTTTCCT-----CCTGTCTGGTTCTT 1243
||| ||| ||| |||| |||| | |.|||| ||.|||| |||| .|||||
Sbjct 1113 AGG-----TAA-GGACCTGAGCTCACAG--------ATCTGCCTACAACTATCCTCTGCCCCTG--GGGTTC-- 1168
Query 1244 TGATCCTCTCCGGCAGCTTCATCTACATAGGGTTGCCCAGGGCGCTGCCCTCCTGTGGTCCAGCCTCCCCTCCA 1317
|..|||||
Sbjct 1169 ------------GAGGCTTC------------------------------------------------------ 1176
Query 1318 GCCACGCCTCCCCCAGAGACGGGGGAGCTGCTTCCCGCTCCCCAGGCAGTCTTGCTGTCCCCAGGAGGCCCTGG 1391
Sbjct 1177 -------------------------------------------------------------------------- 1176
Query 1392 CTCCACTCTGGACACCACTTGT 1413
Sbjct 1177 ---------------------- 1176