Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09805
- Subject:
- XR_001755170.2
- Aligned Length:
- 2446
- Identities:
- 861
- Gaps:
- 1485
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGCAGTGGCAGGAACTTGGCTCACTGCAACCTCCGCTTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAGTAGCTGGGATTACAGGCGCACGTCACCACACCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACAGGCGTGAGCCACCGTGCCCGGCCGGGAGGTCACTTTAAGGAGGGCTGTCCAACTGCAAGGAGCCGCAAGCA 296
Query 1 ------------------------------------------------------------------ATGAAGCC 8
|||||.||
Sbjct 297 GGAAGTGAAACCACAGCACTTCAAAAAAAGAGGGAGACTGGGACAAGCGTATCTAAGAGGCTGAACATGAATCC 370
Query 9 TCACTTCAGAAACACAGTGGAGCGAATGTATCGAGACACATTCTCCTACAACTTTTATAATAGACCCATCCTTT 82
.||..|||||||..|..|||||||.|||||||||||||||||||.|.||||||||.|.||...|||||||||.|
Sbjct 371 ACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACCCATCCTCT 444
Query 83 CTCGTCGGA-ATACCGTCTGGCTGTGCTACGAAGTGAAAACAAA---GGGTCCCTCAAGGCCCCGTTTGGACGC 152
.|.|||||| .|||..| |||||||||||.||||||||||.||| |||.|.|||||..|.||.||.||||.|
Sbjct 445 ATGGTCGGAGCTACACT-TGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTTGGGACAC 517
Query 153 AAAGATCTTTCGAGGCC------------------------------------AGGTGTATTCCCAGCCTGAGC 190
|..|.|||||||||||| |||||||||.||.|..||||.
Sbjct 518 AGGGGTCTTTCGAGGCCCGGTACTACCCAAACGTCAGTCGAATCACAGGCAGGAGGTGTATTTCCGGTTTGAGA 591
Query 191 ACCACGCAGAAATGTGCTTCCTCTCTTGGTTCTGTGGCAACCAGCTGCCTGCTTACAAGTGTTTCCAGATCACC 264
||||||||||||||||||||.|.|||||||||||||||||||..|||||||||.|||.|.|.||||||||||||
Sbjct 592 ACCACGCAGAAATGTGCTTCTTATCTTGGTTCTGTGGCAACCGACTGCCTGCTAACAGGCGCTTCCAGATCACC 665
Query 265 TGGTTTGTATCCTGGACCCCCTGCCCGGACTGTGTGGCGAAGCTGGCCGAATTCCTGTCTGAGCACCCCAATGT 338
|||||||||||.||||.||||||||.|..||||||||.||||.||.||.|||||.||.||||||||||||||||
Sbjct 666 TGGTTTGTATCATGGAACCCCTGCCTGCCCTGTGTGGTGAAGGTGACCAAATTCTTGGCTGAGCACCCCAATGT 739
Query 339 CACCCTGACCATCTCCGCCGCCCGCCTCTACTACTACTGGGAAAGAGATTACCGAAGGGCGCTCTGCAGGCTGA 412
|||||||||||||||.|||||||||||||||||||||.||||.|||||||..||..|||.||||..|||||||.
Sbjct 740 CACCCTGACCATCTCTGCCGCCCGCCTCTACTACTACCGGGATAGAGATTGGCGGTGGGTGCTCCTCAGGCTGC 813
Query 413 GTCAGGCAGGGGCCCGTGTGAAGATTATGGACGATGAAGAATTTGCATACTGCTGGGAAAACTTTGTGTACAGT 486
.|.||||||||||||||||||||||.||||||.|||||||.||||||||||||||||||||||||||||.||.|
Sbjct 814 ATAAGGCAGGGGCCCGTGTGAAGATCATGGACTATGAAGACTTTGCATACTGCTGGGAAAACTTTGTGTGCAAT 887
Query 487 GAAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATTCCTGCACCGCACGCTAAAGGAGAT 560
|||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 888 GAAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATCCCTGCACCGCACGCTAAAGGAGAT 961
Query 561 TCTCAGAAACCCGATGGAGGCAATGTATCCACACATATTCTACTTCCACTTTAAAAACCTACGCAAAGCCTATG 634
|||
Sbjct 962 TCT----------------------------------------------------------------------- 964
Query 635 GTCGGAACGAAAGCTGGCTGTGCTTCACCATGGAAGTTGTAAAGCACCACTCACCTATCTCCTGGAAGAGGGGC 708
Sbjct 965 -------------------------------------------------------------------------- 964
Query 709 GTCTTCCGAAACCAGGTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTCTGTGACGA 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 965 ------------CAGGTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTCTGTGACGA 1026
Query 783 CATACTGTCTCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAGTGTGCAGGGG 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1027 CATACTGTCTCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAGTGTGCAGGGG 1100
Query 857 AGGTGGCCGAGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTACTACTTCTGG 930
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 1101 AGGTGGCCGAGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTGCTACTTCTGG 1174
Query 931 GATACAGATTACCAGGAGGGGCTCCGCAGCCTGAGTCAGGAAGGGGCCTCCGTGGAGATCATGGGCTACAAAGA 1004
||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1175 GATACAGATTACCAGGAGGGGCTCTGCAGCCTGAGTCAGGAAGGGGCCTCCGTGAAGATCATGGGCTACAAAGA 1248
Query 1005 TTTTAAATATTGTTGGGAAAACTTTGTGTACAATGATGATGAGCCATTCAAGCCTTGGAAAGGACTAAAATACA 1078
||||..||.|||||||.|||||||||||||||.|||||||||||||||||||||||||||.||||||.||..||
Sbjct 1249 TTTTGTATCTTGTTGGAAAAACTTTGTGTACAGTGATGATGAGCCATTCAAGCCTTGGAAGGGACTACAAACCA 1322
Query 1079 ACTTTCTATTCCTGGACAGCAAGCTGCAGGAGATTCTCGAG--------------------------------- 1119
||||||.|.|.|||.|.||.|.|||.|.||||||||||.||
Sbjct 1323 ACTTTCGACTTCTGAAAAGAAGGCTACGGGAGATTCTCCAGTGAGGGGTCTCCCTGGGCCTCATGGTCTGTCTC 1396
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1397 TTCTAGCCTCCTGCTCATGCTGCACGGGCCTCCCCTCCATCCTGCACCAGCTGTGCTTTTGCCTGGTCATCCTG 1470
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1471 AGCCCCTCCTGGCCTCAGGGCCATTCCATAGTGCCCCCCTGCCTCACCACCTCCTCCCCGCTCTCCCAGGCTCT 1544
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1545 TCTTGTAGAGGCTCTCCATCCACCTCCCCAGTCCTGTTCCCCCAGCCTGGGTGCCCCTAACTTGACTCTTCCCA 1618
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1619 TCTCCCCAGCATAACCAAATCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCACTCTGTCGCCCAGACTA 1692
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1693 GAGTGCAATGGCTGGATCTCAGCTCACTGCAAACTCTGCTTACTGGGTTCAAGTGATTCTCCTGTCTCAGCTTC 1766
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1767 TGAGTAGCTGGGATTACAGATGCCTGCCACCACGCCCAGCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTGTAT 1840
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1841 TTTTAGTAGTGACTGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCTGCCCATC 1914
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1915 TCTGTCTCCCAAAGTGCTGGGATTACGGGCGTGAGCCACCCGGCTCGGCCGCACAACCAAATCTTATTAAACTC 1988
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1989 AATCTAGTCTGGCCCTGGTGACTCACGCCTTTCGGAGGCAGAGGTGGGAGAATCGCTTGAGCCCAGAAGTTTGA 2062
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 2063 GACCAGCCTGGGCCACACGACAAAGCCCCATTTCTACAAAAAAAAATACCAAAAAAAAGCCAGATGTGGTGGCA 2136
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 2137 TGCACCTGTAGTTTAAGCTACTTGGGAGGATGAAGTGGGAGGACTGCTTGAGCCGGGGAGGTGGAGGCTGGAGT 2210
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 2211 AAACTGAGATCGCGCCACAGAACTCCAGTTTGAGCAACAGATCAAGACCCTGCCTGAAAATAAATCAATAAATA 2284
Query 1120 ---- 1119
Sbjct 2285 CACT 2288
