Nucleotide Global Alignment

Description

• Query: ccsbBroad304_09814
• Subject: XM_006721756.3
• Aligned Length: 1053
• Identities: 806
• Gaps: 213

Alignment

Query    1  ATGCTCCAAGGCCACAGCTCTGTGTTCCAGGCCTTGCTGGGGACCTTCTTCACCTGGGGGATGACAGCAGCTGG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTCCAAGGCCACAGCTCTGTGTTCCAGGCCTTGCTGGGGACCTTCTTCACCTGGGGGATGACAGCAGCTGG  74

Query   75  GGCAGCTCTCGTGTTCGTATTCTCTAGTGGACAGAGGCGGATCTTAGATGGAAGTCTTGGCTTTGCTGCAGGGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGCAGCTCTCGTGTTCGTATTCTCTAGTGGACAGAGGCGGATCTTAGATGGAAGTCTTGGCTTTGCTGCAGGGG  148

Query  149  TCATGTTGGCAGCTTCCTATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCCACGTCCTCTGGGGGCTTCGGT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCATGTTGGCAGCTTCCTATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCCACGTCCTCTGGGGGCTTCGGT  222

Query  223  GCCTTTGCCTTCTTCCCTGTGGCTGTTGGCTTCACCCTTGGAGCGGCTTTTGTCTACTTGGCTGACCTCCTGAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCCTTTGCCTTCTTCCCTGTGGCTGTTGGCTTCACCCTTGGAGCGGCTTTTGTCTACTTGGCTGACCTCCTGAT  296

Query  297  GCCTCACTTGGGTGCAGCAGAAGACCCCCAGACGGCCCTGGCACTGAACTTCGGCTCTACGTTGATGAAGAAGA  370
            ||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCTCACTTGGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACTGAACTTCGGCTCTACGTTGATGAAGAAGA  370

Query  371  AGTCTGATCCTGAGGGTCCCGCGCTGCTCTTCCCTGAGAGTGAACTTTCCATCCGGAT----------------  428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
Sbjct  371  AGTCTGATCCTGAGGGTCCCGCGCTGCTCTTCCCTGAGAGTGAACTTTCCATCCGGATAGGTAGAGCTGGGCTT  444

Query  429  -----AGACAAGAGTGAGAATGGTGAGGCATATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGGGTCC  497
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTTTCAGACAAGAGTGAGAATGGTGAGGCATATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGGGTCC  518

Query  498  TGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATCGCACTGCTCA  571
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATCGCACTGCTCA  592

Query  572  TCTTGGCCATCACTATACACAACGTTCCAGAGGGTCTCGCTGTTGGAGTTGGATTTGGGGCTATAGAAAAGACG  645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCTTGGCCATCACTATACACAACGTTCCAGAGGGTCTCGCTGTTGGAGTTGGATTTGGGGCTATAGAAAAGACG  666

Query  646  GCATCTGCTACCTTTGAGAGTGCCAGG-AATTTGGCCATTGGAATCGGGATCCAGAATTTCCCCGAGGGCCTGG  718
            ||||||||||||||||||||||||||| ||    ||..||         .||..|||                .
Sbjct  667  GCATCTGCTACCTTTGAGAGTGCCAGGCAA----GCTCTT---------CTCTTGAA----------------C  711

Query  719  CTGTCAGCCTTCCCTTGCGAGGGGCAGG-CTTCTCCACCTGGAGAGCTTTCTGGTATGGGCAGCTGAGCGGCAT  791
            ||.|||..||.||||       |.|.|| .||||        ||||...||   |||.|||||||         
Sbjct  712  CTATCACACTACCCT-------GTCTGGAATTCT--------AGAGTGATC---TATTGGCAGCT---------  758

Query  792  GGTGGAGCCCCTGGCCGGGGTCTTTGGTGCCTTTGCCGTGGTGCTGGCTGAGCCCATCCTGCC---CTAC---G  859
                     |||        |||       |||  |.||..|.||||||     |||||||||   ||||   |
Sbjct  759  ---------CCT--------TCT-------CTT--CAGTTTTCCTGGCT-----CATCCTGCCACACTACACAG  801

Query  860  CTCTGGCCTTTGCTGCCGGTGCCATGGTCTACGTGGTCATGGACGACATCATCCCCGAAGCCCAGATCAGTGGT  933
            | ||..||||                                   |||         |||   ||| |||||| 
Sbjct  802  C-CTCACCTT-----------------------------------ACA---------AAG---AGA-CAGTGG-  825

Query  934  AATGGGAAA-------CTGGCATC----------CTGGGCCTCCATCCTGG--GATTTGTAGTGATGATGTCAC  988
            |||..||||       ||||||.|          |.|.|||.||| |..||  |.||.||||         || 
Sbjct  826  AATTTGAAAGTGCCGGCTGGCAGCGGTGGACAGACGGCGCCACCA-CGCGGTAGCTTGGTAG---------CA-  888

Query  989  TGGACGTTGGCCTGGGC  1005
                             
Sbjct  889  -----------------  888