Nucleotide Global Alignment

Description

• Query: ccsbBroad304_09814
• Subject: XM_017024340.2
• Aligned Length: 1015
• Identities: 681
• Gaps: 305

Alignment

Query    1  ATGCTCCAAGGCCACAGCTCTGTGTTCCAGGCCTTGCTGGGGACCTTCTTCACCTGGGGGATGACAGCAGCTGG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTCCAAGGCCACAGCTCTGTGTTCCAGGCCTTGCTGGGGACCTTCTTCACCTGGGGGATGACAGCAGCTGG  74

Query   75  GGCAGCTCTCGTGTTCGTATTCTCTAGTGGACAGAGGCGGATCTTAGATGGAAGTCTTGGCTTTGCTGCAGGGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGCAGCTCTCGTGTTCGTATTCTCTAGTGGACAGAGGCGGATCTTAGATGGAAGTCTTGGCTTTGCTGCAGGGG  148

Query  149  TCATGTTGGCAGCTTCCTATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCCACGTCCTCTGGGGGCTTCGGT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCATGTTGGCAGCTTCCTATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCCACGTCCTCTGGGGGCTTCGGT  222

Query  223  GCCTTTGCCTTCTTCCCTGTGGCTGTTGGCTTCACCCTTGGAGCGGCTTTTGTCTACTTGGCTGACCTCCTGAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCCTTTGCCTTCTTCCCTGTGGCTGTTGGCTTCACCCTTGGAGCGGCTTTTGTCTACTTGGCTGACCTCCTGAT  296

Query  297  GCCTCACTTGGGTGCAGCAGAAGACCCCCAGACGGCCCTGGCACTGAACTTCGGCTCTACGTTGATGAAGAAGA  370
            ||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCTCACTTGGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACTGAACTTCGGCTCTACGTTGATGAAGAAGA  370

Query  371  AGTCTGATCCTGAGGGTCCCGCGCTGCTCTTCCCTGAGAGTGAACTTTCCATCCGGATAGACAAGAGTGAGAAT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGTCTGATCCTGAGGGTCCCGCGCTGCTCTTCCCTGAGAGTGAACTTTCCATCCGGATAGACAAGAGTGAGAAT  444

Query  445  GGTGAGGCATATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGTGAGGCATATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCG  518

Query  519  AGGGAATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATCGCACTGCTCATCTTGGCCATCACTATACACA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGGGAATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATCGCACTGCTCATCTTGGCCATCACTATACACA  592

Query  593  ACGTTCCAGAGGGTCTCGCTGTTGGAGTTGGATTTGGGGCTATAGAAAAGACGGCATCTGCTACCTTTGAGAGT  666
            ||||||||   |||.||..|.|   ||.||.|           ||||   ||.||| ||| ||..|||.|.||.
Sbjct  593  ACGTTCCA---GGTTTCCATTT---AGCTGCA-----------AGAA---ACAGCA-CTG-TATTTTTCAAAGC  644

Query  667  GCCAGGAA----TTTGGCCATTGGAATCGGGATCCAGAATTTCCCCGAGGGCCTGGCTGTCAGCCTTCCCTTGC  736
            .|.||.||    |.||||||           .|||||||                      ||.|....|.|  
Sbjct  645  ACTAGAAAATTCTGTGGCCA-----------GTCCAGAA----------------------AGACAAAACAT--  683

Query  737  GAGGGGCAGGCTTCTCCACCTGGAGAGCTTTCTGGTA-----TGGGCAGCTGA-GCGGCATGGTGGAGCCCCTG  804
             ||             ||||.|        |.|||.|     |||  ||||.| ||.||||             
Sbjct  684  -AG-------------CACCAG--------TGTGGCAAGAAGTGG--AGCTAATGCAGCAT-------------  720

Query  805  GCCGGGGTCTTTGGTGCCTTTGCCGTGGTGCTGGCTGAGCCCATCCTGCCCTACGCTCTGGCCTTTGCTGCCGG  878
                                                                                      
Sbjct  721  --------------------------------------------------------------------------  720

Query  879  TGCCATGGTCTACGTGGTCATGGACGACATCATCCCCGAAGCCCAGATCAGTGGTAATGGGAAACTGGCATCCT  952
                                                                                      
Sbjct  721  --------------------------------------------------------------------------  720

Query  953  GGGCCTCCATCCTGGGATTTGTAGTGATGATGTCACTGGACGTTGGCCTGGGC  1005
                                                                 
Sbjct  721  -----------------------------------------------------  720