Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09868
- Subject:
- XR_001749501.2
- Aligned Length:
- 2444
- Identities:
- 1299
- Gaps:
- 1142
Alignment
Query 1 ---------------------------------------------------------ATGGCGGCGGCTGCGGG 17
|||||||||||||||||
Sbjct 1 CAAGCGGTAGGCGGCGGCGCCGGGAGAGAAGCGCCGCCTAGCTGCGCTTCCGCAAAGATGGCGGCGGCTGCGGG 74
Query 18 TAGCTGCGCGCGAGTGGCGGCCTGGGGCGGAAAACTGCGACGGGGGCTCGCTGTCAGCCGACAGGCTGTGCGGA 91
||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TAGCTGCGCGCGGGTGGCGGCCTGGGGCGGAAAACTGCGACGGGGGCTCGCTGTCAGCCGACAGGCTGTGCGGA 148
Query 92 GTCCCGGCCCCTTGGCAGCGGCAGTGGCCGGCGCGGCCCTGGCAGGAGCAGGAGCGGCCTGGCACCACAGCCGC 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTCCCGGCCCCTTGGCAGCGGCAGTGGCCGGCGCGGCCCTGGCAGGAGCAGGAGCGGCCTGGCACCACAGCCGC 222
Query 166 GTCAGTGTTGCGGCGCGGGATGGCAGTTTTACAGTCTCCGCACAGAAAAATGTTGAACATGGAATAATATATAT 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTCAGTGTTGCGGCGCGGGATGGCAGTTTTACAGTCTCCGCACAGAAAAATGTTGAACATGGAATAATATATAT 296
Query 240 TGGGAAACCGTCTCTTCGTAAGCAGCGCTTCATGCAGTTTTCTTCACTCGAACATGAAGGAGAATATTATATGA 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGGGAAACCGTCTCTTCGTAAGCAGCGCTTCATGCAGTTTTCTTCACTCGAACATGAAGGAGAATATTATATGA 370
Query 314 CACCACGAGACTTCCTCTTCTCAGTGATGTTTGAGCAAATGGAACGTAAAACTTCAGTCAAGAAGCTGACAAAA 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CACCACGAGACTTCCTCTTCTCAGTGATGTTTGAGCAAATGGAACGTAAAACTTCAGTCAAGAAGCTGACAAAA 444
Query 388 AAGGACATCGAGGATACACTGTCAGGGATCCAAACAGCTGGCTGTGGATCAACTTTTTTCAGAGACCTTGGCGA 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGGACATCGAGGATACACTGTCAGGGATCCAAACAGCTGGCTGTGGATCAACTTTTTTCAGAGACCTTGGCGA 518
Query 462 TAAAGGGCTAATTTCATATACCGAGTATCTTTTCTTGCTTACAATCCTCACTAAACCCCATTCTGGATTTCATG 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TAAAGGGCTAATTTCATATACCGAGTATCTTTTCTTGCTTACAATCCTCACTAAACCCCATTCTGGATTTCATG 592
Query 536 TTGCTTTTAAAATGCTGGATACAGATGGTAATGAGATGATTGAAAAAAGGGAATTTTTTAAGCTGCAGAAGATC 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTGCTTTTAAAATGCTGGATACAGATGGTAATGAGATGATTGAAAAAAGGGAATTTTTTAAGCTGCAGAAGATC 666
Query 610 ATAAATAAACAAGATGACTTGATGACAGTGAAAACTAATGAAACTGGATATCAGGAAGCAATAGTGAAAGAACC 683
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATAAGTAAACAAGATGACTTGATGACAGTGAAAACTAATGAAACTGGATATCAGGAAGCAATAGTGAAAGAACC 740
Query 684 TGAAATTAACACAACTCTTCAGATGCGTTTCTTTGGAAAAAGAGGACAAAGAAAACTTCATTATAAAGAATTTC 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGAAATTAACACAACTCTTCAGATGCGTTTCTTTGGAAAAAGAGGACAAAGAAAACTTCATTATAAAGAATTTC 814
Query 758 GAAGATTTATGGAAAATTTACTAACAGAGATTCAAGAAATGGAATTCCTTCAGTTTTCTAAAGGTTTGAGTTTC 831
|||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAAGATTTATGGAAAATTTACAAACAGAGATTCAAGAAATGGAATTCCTTCAGTTTTCTAAAGGTTTGAGTTTC 888
Query 832 ATGAGAAAAGAAGACTTTGCAGAGTGGCTACTTTTTTTCACTAACACTGAAAATAAAGATATTTATTGGAAAAA 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATGAGAAAAGAAGACTTTGCAGAGTGGCTACTTTTTTTCACTAACACTGAAAATAAAGATATTTATTGGAAAAA 962
Query 906 TGTGAGAGAGAAGTTGTCAGCAGGAGAGAGCATTAGTTTGGATGAATTCAAGTCATTTTGCCATTTTACAACCC 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGTGAGAGAGAAGTTGTCAGCAGGAGAGAGCATTAGTTTGGATGAATTCAAGTCATTTTGCCATTTTACAACCC 1036
Query 980 ACTTGGAAGACTTTGCTATTGCCATGCAGATGTTCAGTTTAGCTCATCGTCCTGTCAGAC-------------- 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACTTGGAAGACTTTGCTATTGCCATGCAGATGTTCAGTTTAGCTCATCGTCCTGTCAGACTAGAAGGAAGAAGG 1110
Query 1040 -------------------------------------------------------------------------- 1039
Sbjct 1111 CCGGGCATGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGTCCAAGGTGGGCGGATCACAAAGTCAGGAGT 1184
Query 1040 -------------------------------------------------------------------------- 1039
Sbjct 1185 TCAAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAACTAGCTGGGCGTGGTGGCA 1258
Query 1040 -------------------------------------------------------------------------- 1039
Sbjct 1259 GGCGCCTGTAATCCCAGCTATTCAGGAGGCCGAGGCAAGAGAATCGCTTGAACCCGGGAGACGGAGGTTGTAGT 1332
Query 1040 -------------------------------------------------------------------------- 1039
Sbjct 1333 GAGTCAAGATCGTGCCATTGCACTCCAGCCTGGGCGACGAGCAAGATTCATCTCAAATATATGTTTAGAGCATT 1406
Query 1040 -------------------------------------------------------------------------- 1039
Sbjct 1407 GATTAAATTACAATAGCTCATTTGTCTTGCAGTGACTCTCATGACATTCGTCGGCTTATGGTTTGAATATTTTC 1480
Query 1040 -------------------------------------------------------------------------- 1039
Sbjct 1481 TTCATGGGTATTTTTGTTTTTGTTTTACTTCCCAAATAATAAAAATTTGGATTTGCTTTTACTTCTCAAATAAT 1554
Query 1040 ------------------------------------------------------------------TAGCGGAG 1047
||||||||
Sbjct 1555 GAAAATTTAGATTAATTTCACTTAGACTATTTCACATAGTTGATAAGTTGTTTTATGTTTGTTTTTTAGCGGAG 1628
Query 1048 TTTAAGAGAGCTGTGAAAGTAGCAACAGGACAAGAACTCTCAAACAATATTTTGGACACTGTCTTTAAGATCTT 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TTTAAGAGAGCTGTGAAAGTAGCAACAGGACAAGAACTCTCAAACAATATTTTGGACACTGTCTTTAAGATCTT 1702
Query 1122 TGATTTGGATGGTGATGAATGTCTTAGTCATGAAGAGTTTCTTGGGGTGTTAAAAAACAGAATGCATCGAGGTT 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TGATTTGGATGGTGATGAATGTCTTAGTCATGAAGAGTTTCTTGGGGTGTTAAAAAACAGAATGCATCGAGGTT 1776
Query 1196 TATGGGTACCACAACATCAGAGTATACAAGAATACTGGAAGTGTGTGAAGAAAGAAAGCATTAAAGGAGTAAAA 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TATGGGTACCACAACATCAGAGTATACAAGAATACTGGAAGTGTGTGAAGAAAGAAAGCATTAAAGGAGTAAAA 1850
Query 1270 GAAGTCTGGAAACAAGCTGGAAAAGGTCTTTTT----------------------------------------- 1302
|||||||||||||||||||||||||||||||||
Sbjct 1851 GAAGTCTGGAAACAAGCTGGAAAAGGTCTTTTTTAATAAAAGATATAATAGTATGGCAATTATATTGTTCCAAA 1924
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1925 TGTCAAAATTTGTGATTTTTTAGAAGTACTTGCTATTTATCTTCTTAAGTCTTCATTGATATTCTGTGTGAAAT 1998
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1999 AAGCATGTCTTGTACTTGCTTTCTGATTCATAATTTTATTAAAGAACTTAGTAGAAAGAAAAGTAAGTATAAAA 2072
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2073 ATAGATATTGGATTCTGTCAGAAGGCCTAGATTTGAAATAATGTTTTGTACTTCGGTAAGATGGAAAACTTAGT 2146
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2147 GATTCACTGATTTCTTAGACACTCTAATATGATATGCTTTCTGGAAGGATAAAACAAATACATATGGGAAAAAG 2220
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2221 TACTTGAGACCAAGGCCAGCATCAATTCCAGACATCTTCATGTTCCTAATAGGCTAAATGAAGTTAAAAACTTA 2294
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2295 TTTCAGATTTTTCTCATCTGTACCTTATATCTCATAAATTTATTGCATATTTTATGTCAGTAGCTTAGCTGTTT 2368
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2369 ATTGTCTTTAAAATAACATGTAAACTTCAATGTTCTATCTGGAAGCAGAATAAAATATTTACATAGATACAAAA 2442
Query 1303 -- 1302
Sbjct 2443 AA 2444
