Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09906
- Subject:
- NM_001349115.1
- Aligned Length:
- 1915
- Identities:
- 918
- Gaps:
- 986
Alignment
Query 1 ATGGCCATGTGGAACAGGCCATGCCAGAGGCTGCCTCAGCAGCCTCTGGTAGCTGAGCCCACTGCAGAGGGGGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCCATGTGGAACAGGCCATGCCAGAGGCTGCCTCAGCAGCCTCTGGTAGCTGAGCCCACTGCAGAGGGGGA 74
Query 75 GCCACACCTGCCCACGGGCCGGGAGCTGACTGAGGCCAACCGCTTCGCCTATGCTGCCCTCTGTGGCATCTCCC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCCACACCTGCCCACGGGCCGGGAGCTGACTGAGGCCAACCGCTTCGCCTATGCTGCCCTCTGTGGCATCTCCC 148
Query 149 TGTCCCAGTTATTTCCTGAACCCGAACACAGCTCCTTCTGCACAGAGTTCATGGCAGGCCTGGTGCAGTGGCTG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGTCCCAGTTATTTCCTGAACCCGAACACAGCTCCTTCTGCACAGAGTTCATGGCAGGCCTGGTGCAGTGGCTG 222
Query 223 GAGTTGTCTGAAGCTGTCTTGCCAACCATGACTGCTTTTGCGAGCGGCCTGGGAGGTGAAGGAGCAGATGTGTT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAGTTGTCTGAAGCTGTCTTGCCAACCATGACTGCTTTTGCGAGCGGCCTGGGAGGTGAAGGAGCAGATGTGTT 296
Query 297 TGTTCAAATTTTACTGAAGGACCCCATCTTGAAGGACGACCCGACGGTGATCACTCAGGACCTTCTGAGCTTCT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGTTCAAATTTTACTGAAGGACCCCATCTTGAAGGACGACCCGACGGTGATCACTCAGGACCTTCTGAGCTTCT 370
Query 371 CACTCAAGGATGGGCACTATGACGCCCGGGCCAGAGTCCTCGTTTGCCACATGACCTCCCTGCTCCAAGTGCCC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CACTCAAGGATGGGCACTATGACGCCCGGGCCAGAGTCCTCGTTTGCCACATGACCTCCCTGCTCCAAGTGCCC 444
Query 445 TTGGAGGAGCTGGATGTCCTTGAAGAGATGTTCCTGGAGAGCCTGAAGGAAATCAAAGAAGAGGAATCTGAAAT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTGGAGGAGCTGGATGTCCTTGAAGAGATGTTCCTGGAGAGCCTGAAGGAAATCAAAGAAGAGGAATCTGAAAT 518
Query 519 GGCCGAGGCATCCCGAAAGAAGAAAGAAAACCGGAGGAAATGGAAGCGTTATCTCCTGATAGGCCTGGCGACTG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGCCGAGGCATCCCGAAAGAAGAAAGAAAACCGGAGGAAATGGAAGCGTTATCTCCTGATAGGCCTGGCGACTG 592
Query 593 TCGGAGGCGGAACGGTGATCGGTGTGACTGGAGGTCTAGCTGCACCCCTTGTTGCCGCTGGAGCAGCGACGATT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCGGAGGCGGAACGGTGATCGGTGTGACTGGAGGTCTAGCTGCACCCCTTGTTGCCGCTGGAGCAGCGACGATT 666
Query 667 ATTGGCAGCGCCGGGGCAGCGGCTCTGGGCTCAGCAGCCGGCATAGCCATCATGACCTCGCTGTTTGGTGCAGC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATTGGCAGCGCCGGGGCAGCGGCTCTGGGCTCAGCAGCCGGCATAGCCATCATGACCTCGCTGTTTGGTGCAGC 740
Query 741 TGGAGCTGGCCTGACAGGATACAAGATGAAGAAGCGAGTGGGAGCCATTGAAGAGTTCACGTTTCTGCCTCTGA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGGAGCTGGCCTGACAGGATACAAGATGAAGAAGCGAGTGGGAGCCATTGAAGAGTTCACGTTTCTGCCTCTGA 814
Query 815 CGGAGGGCAGGCAGCTGCACATCACCATCGCCGTCACGGGGTGGCTCGCTTCTGGCAAATACC----------- 877
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CGGAGGGCAGGCAGCTGCACATCACCATCGCCGTCACGGGGTGGCTCGCTTCTGGCAAATACCGTGAGGACCAG 888
Query 878 --GCACCTTCAGTGCCCCGTGGGCTGCCCTGGCCCACAGCCGTGAGCAGTACTGCCTGGCCTGGGAAGCCAAGT 949
|.|||...|||| |.||| || |||.||||| ..||||||||| |.||.
Sbjct 889 GAGGACCAGAAGTG----GAGGG-------GG---------GTGGGCAGT----GGTGGCCTGGG----CCAGA 934
Query 950 ACCTGATGGAGCTCGGCAATGCCCTGGAGACCATCCTCAGTGGTCTCGCCAACATGGTGGCCCAGGAGGCCCTA 1023
.|||| |||
Sbjct 935 CCCTG---------GGC--------------------------------------------------------- 942
Query 1024 AAGTACACAGTGTTGTCTGGCATTGTGGCTGCCCTGACCTGGCCAGCCTCACTCCTCAGTGTCGCCAATGTCAT 1097
Sbjct 943 -------------------------------------------------------------------------- 942
Query 1098 CGACAACCCCTGGGGGGTGTGTCTCCATCGATCAGCAGAGGTTGGCAAGCACCTGGCCCACATCCTGCTCTCCC 1171
Sbjct 943 -------------------------------------------------------------------------- 942
Query 1172 GGCAGCAGGGGCGACGACCTGTCACCTTGATTGGCTTCAGCCTGGGAGCCAGAGTCATCTACTTCTGTCTGCAG 1245
Sbjct 943 -------------------------------------------------------------------------- 942
Query 1246 GAGATGGCTCAAGAGAAAGATTGCCAAGGAATCATCGAGGACGTCATCCTGCTGGGTGCGCCTGTGGAGGGAGA 1319
Sbjct 943 -------------------------------------------------------------------------- 942
Query 1320 AGCCAAGCATTGGGAGCCTTTCCGGAAGGTGGTGTCCGGGAGGATCATCAACGGCTACTGCAGGGGAGACTGGC 1393
Sbjct 943 -------------------------------------------------------------------------- 942
Query 1394 TGCTGAGTTTCGTGTACCGCACATCCTCGGTGCAGCTCCACGTCGCCGGCCTACAGCCCGTGCTGCTGCAGGAC 1467
Sbjct 943 -------------------------------------------------------------------------- 942
Query 1468 AGGAGGGTGGAGAACGTGGACCTGACCTCTGTGGTCAGCGGCCACCTGGACTATGCCAAGCAGATGGATGCCAT 1541
Sbjct 943 -------------------------------------------------------------------------- 942
Query 1542 CCTGAAGGCCGTGGGCATCCGCACCAAGCCAGGCTGGGACGAGAAGGGGCTCTTGCTGGCCCCAGGCTGCCTGC 1615
Sbjct 943 -------------------------------------------------------------------------- 942
Query 1616 CCTCCGAGGAGCCTCGCCAGGCAGCAGCTGCCGCCTCATCAGGCGAGACCCCCCACCAGGTTGGGCAAACCCAG 1689
Sbjct 943 -------------------------------------------------------------------------- 942
Query 1690 GGTCCCATATCCGGAGACACCTCCAAANTGGCCATGTCCACAGACCCCAGCCAAGCCCAGGTGCCAGTAGGGCT 1763
Sbjct 943 -------------------------------------------------------------------------- 942
Query 1764 GGACCAGTCTGAAGGGGCCTCCCTTCCTGCTGCTGCCAGCCCTGAAAGGCCCCCCATCTGCAGCCATGGCATGG 1837
Sbjct 943 -------------------------------------------------------------------------- 942
Query 1838 ACCCCAACCCACTGGGCTGCCCCGATTGTGCCTGCAAGACCCAGGGCCCCAGCACGGGGCTGGAC 1902
Sbjct 943 ----------------------------------------------------------------- 942
