Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09944
- Subject:
- NM_001033275.4
- Aligned Length:
- 1329
- Identities:
- 933
- Gaps:
- 222
Alignment
Query 1 ATGCGGCGCTACCTGCGCGTCGTGGTGCTGTGTGTGGCCTGCGGCTTCTGCTCGCTCCTTTACGCTTTCAGCCA 74
|||||||||||||||||.|||||.|.||||||..||||||||||||||||||||||.||.|||||.||||||||
Sbjct 1 ATGCGGCGCTACCTGCGGGTCGTAGGGCTGTGCCTGGCCTGCGGCTTCTGCTCGCTGCTGTACGCCTTCAGCCA 74
Query 75 GCTCGCCGTGTCCCTGGAAGAAGGAACGGGC-GGCGGTGGCGGGAAGCCGCAGGCCGCGGTGGCTTCCTGGCTC 147
||||||.||||||.||||.|||||| || |.|||.|||.|.|.|||||||||||||||.|.|||||||||.
Sbjct 75 GCTCGCGGTGTCCTTGGAGGAAGGA----GCTGCCGGGGGCCGCAGGCCGCAGGCCGCGGTAGTTTCCTGGCTG 144
Query 148 GCGGGCGGCGGACGCGGCGCCGTGAGAGGCGCCGGCGTCGCGGGCCCCGCAGCGCATCCCGGCGTGTCGGACAG 221
||||.|||.|||||||||.|.|.|||||||||.|||..||||||| ||.|||..|.|||.|||
Sbjct 145 GCGGACGGTGGACGCGGCACGGGGAGAGGCGCGGGCAGCGCGGGC------------CCGGGCCGGACGGGCAG 206
Query 222 GTGTAAAGATTTCTCTCTGTGTTACTGGAATCCCTATTGGATGCTGCCCTCTGATGTTTGTGGAATGAACTGCT 295
|| ||||
Sbjct 207 GT--------------------------------------------------------------ATGA------ 212
Query 296 TTTGGGAAGCGGCTTTTAGGTACAGTCTGAAAATACAGCCTGTTGAGAAAATGCATCTAGCTGTAGTTGCCTGT 369
|.||||||.|..|||.|.||||||||||||.||.|||||.|||||||||
Sbjct 213 -------------------------TATGAAAACAAGGCCCGATGAGAAAATGCACCTTGCTGTTGTTGCCTGT 261
Query 370 GGTGAAAGACTGGAAGAAACTATGACCATGTTGAAGTCAGCTATCATTTTCAGCATCAAACCTCTTCAATTCCA 443
|||||.|||||||||||||||.||||.|||||||||||||||.|.||||||||||||||.||.||.||..||||
Sbjct 262 GGTGAGAGACTGGAAGAAACTGTGACTATGTTGAAGTCAGCTCTGATTTTCAGCATCAAGCCACTGCACGTCCA 335
Query 444 TATTTTTGCTGAAGATCAGCTACATCATAGCTTTAAAGGCAGACTTGACAACTGGTCATTTCTACAAACATTTA 517
.||.|||||||||||.||.||.||..||||||||||||.||||||||.||.||||||.||.||.|..|.||||.
Sbjct 336 CATCTTTGCTGAAGACCAACTGCACGATAGCTTTAAAGACAGACTTGCCAGCTGGTCCTTCCTGCGGAGATTTG 409
Query 518 ATTATACGTTATACCCCATAACCTTTCCAAGTGAGAATGCAGCAGAGTGGAAAAAACTCTTTAAACCATGTGCT 591
|.||.|...|.|||||.||.|||||.|||.||||.|..||.||.||.|||||.||.||||||||.||.|||||.
Sbjct 410 ACTACAGCCTGTACCCTATCACCTTCCCAGGTGACAGCGCCGCGGACTGGAAGAAGCTCTTTAAGCCCTGTGCG 483
Query 592 TCGCAGAGATTGTTCTTGCCGTTAATCCTGAAAGAAGTTAACTCACTATTGTATGTCGACACTGATATCCTTTT 665
||.|||||..||||||||||.|||||.||||||||||||.|||||||.||||||||.|||||||||||||||||
Sbjct 484 TCCCAGAGGCTGTTCTTGCCATTAATACTGAAAGAAGTTGACTCACTGTTGTATGTGGACACTGATATCCTTTT 557
Query 666 TTTACGACCAGTTGATGATATTTGGTCTTTACTAAAGAAATTTAATTCCACACAAATTGCTGCAATGGCACCAG 739
|||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 558 TTTACGACCTGTTGATGATATTTGGTCATTACTAAAGAAATTTAATTCCACACAAATTGCTGCGATGGCACCAG 631
Query 740 AACATGAGGAACCTCGAATAGGATGGTATAATCGCTTTGCTAGGCATCCATATTATGGAAAAACTGGAGTAAAC 813
||||.|||||.||..||||.||||||||||||||||||||..||||.||.||.|||||.|..||.||.||.|||
Sbjct 632 AACACGAGGAGCCCAGAATTGGATGGTATAATCGCTTTGCCCGGCACCCGTACTATGGGAGGACGGGCGTGAAC 705
Query 814 TCTGGAGTTATGTTGATGAACATGACTCGAATGAGAAGGAAGTATTTCAAGAATGATATGACAACTGTACGACT 887
||||||||.|||.|||||||||||||.||.|||||.||||||||.||||||||||||||||||||||..||.||
Sbjct 706 TCTGGAGTGATGCTGATGAACATGACCCGGATGAGGAGGAAGTACTTCAAGAATGATATGACAACTGCGCGGCT 779
Query 888 ACAATGGGGAGATATACTTATGCCATTGCTTAAAAAATACAAACTAAACATCACATGGGGTGATCAAGATCTAT 961
|||||||||.||.||||||||||||.||||||||||.||||||||.||||||||.|||||.|||||.|||||.|
Sbjct 780 ACAATGGGGGGACATACTTATGCCACTGCTTAAAAAGTACAAACTGAACATCACGTGGGGCGATCAGGATCTGT 853
Query 962 TGAATATCGTGTTTTTTCATAATCCAGAAAGCCTTTTTGTTTTTCCGTGTCAATGGAATTATCGACCAGATCAT 1035
|.|||||||||||||..||.||||||||||||||.|||||||||||.||||||||||||||.|||||||||||.
Sbjct 854 TAAATATCGTGTTTTCCCACAATCCAGAAAGCCTCTTTGTTTTTCCATGTCAATGGAATTACCGACCAGATCAC 927
Query 1036 TGTATATATGGAAGCAATTGCCAAGAAGCAGAAGAAGGAGGAATCTTTATTCTTCATGGGAACAGAGGTGTTTA 1109
|||||||||||.|||||.||||.||||||||||||||.||||.||||.|||||||||||.||||||||||||||
Sbjct 928 TGTATATATGGGAGCAACTGCCGAGAAGCAGAAGAAGAAGGAGTCTTCATTCTTCATGGAAACAGAGGTGTTTA 1001
Query 1110 CCATGACGATAAGCAACCAGCATTTAGAGCTGTTTATGAAGCACTGAGAAATTGTTCTTTTGAAGATGACAACA 1183
|||||||||.|||||.||||||||.||||||||.|||||||||||.|||||||||| |.||.|
Sbjct 1002 CCATGACGACAAGCAGCCAGCATTCAGAGCTGTGTATGAAGCACTAAGAAATTGTT--------GGTGTC---- 1063
Query 1184 TCCGTTCCTTATTAAAACCTTTAGAACTGGAACTACAAAAAACAGTGCATAC-----ATACTGTGGAA---AAA 1249
|||.|.|.|.||.|.||...||.| |||..|.| ||...||||.| |.
Sbjct 1064 ------------TAACAGCGTCAGCAGTGTCGCTGC--------GTGGGTTCAGGGGATGGAGTGGGACGGAC- 1116
Query 1250 TTTACAAAATATTTATCAAACAACTAGCAAAAAGTGTAAGAGATCGTTATGCCAGATCACCAAAGGAAAAG 1320
Sbjct 1117 ----------------------------------------------------------------------- 1116