Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10057
- Subject:
- XR_001751900.1
- Aligned Length:
- 1931
- Identities:
- 1271
- Gaps:
- 647
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCTTTTCATGCCAGCGCCAACAGGAGGCTGTCTGGACACACTGATTACTCACTCACCAGCCTCCCTCTTTTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCACCAGCCCAGCCTGACTCCTGGAGATTGTGAATAGCTCCATCCAGCCTGAGAAACAAGCCGGGTGGCTGAGC 148
Query 1 ---------------------------------------ATGCTGCATCCAGAGACCTCCCCTGGCCGGGGGCA 35
|||||||||||||||||||||||||||||||||||
Sbjct 149 CAGGCTGTGCACGGAGCGCCTGACGGGCCCAACAGACCCATGCTGCATCCAGAGACCTCCCCTGGCCGGGGGCA 222
Query 36 TCTCCTGGCTGTGCTCCTGGCCCTCCTTGGCACCGCCTGGGCAGAGGTGTGGCCACCCCAGCTGCAGGAGCAGG 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCTCCTGGCTGTGCTCCTGGCCCTCCTTGGCACCGCCTGGGCAGAGGTGTGGCCACCCCAGCTGCAGGAGCAGG 296
Query 110 CTCCGATGGCCGGAGCCCTGAACAGGAAGGAGAGTTTCTTGCTCCTCTCCCTGCACAACCGCCTGCGCAGCTGG 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTCCGATGGCCGGAGCCCTGAACAGGAAGGAGAGTTTCTTGCTCCTCTCCCTGCACAACCGCCTGCGCAGCTGG 370
Query 184 GTCCAGCCCCCTGCGGCTGACATGCGGAGGCTGGACTGGAGTGACAGCCTGGCCCAGCTGGCTCAAGCCAGGGC 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTCCAGCCCCCTGCGGCTGACATGCGGAGGCTGGACTGGAGTGACAGCCTGGCCCAGCTGGCTCAAGCCAGGGC 444
Query 258 AGCCCTCTGTGGAACCCCAACCCCGAGCCTGGCGTCCGGCCTGTGGCGCACCCTGCAAGTGGGCTGGAACATGC 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGCCCTCTGTGGAACCCCAACCCCGAGCCTGGCGTCCGGCCTGTGGCGCACCCTGCAAGTGGGCTGGAACATGC 518
Query 332 AGCTGCTACCCGCGGGCTTGGTGTCCTTTGTCGAAGTGGTCAGCCTATGGTTTGCAGAGGGGCAGCGGTACAGC 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGCTGCTACCCGCGGGCTTGGTGTCCTTTGTCGAAGTGGTCAGCCTATGGTTTGCAGAGGGGCAGCGGTACAGC 592
Query 406 CACGCGGCAGGAGAGTGTGCTCGCAACGCCACCTGCACCCACTACACGCAGCTCGTGTGGGCCACCTCAAGCCA 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CACGCGGCAGGAGAGTGTGCTCGCAACGCCACCTGCACCCACTACACGCAGCTCGTGTGGGCCACCTCAAGCCA 666
Query 480 GCTGGGCTGTGGGCGGCACCTGTGCTCTGCAGGCCAGGCAGCGATAGAAGCCTTTGTCTGTGCCTACTCCCCCA 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCTGGGCTGTGGGCGGCACCTGTGCTCTGCAGGCCAGGCAGCGATAGAAGCCTTTGTCTGTGCCTACTCCCCCA 740
Query 554 GAGGCAACTGGGAGGTCAACGGGAAGACAATCGTCCCCTATAAGAAGGGTGCCTGGTGTTCGCTCTGCACAGCC 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GAGGCAACTGGGAGGTCAACGGGAAGACAATCGTCCCCTATAAGAAGGGTGCCTGGTGTTCGCTCTGCACAGCC 814
Query 628 AGTGTCTCAGGCTGCTTCAAAGCCTGGGACCATGCAGGGGGGCTCTGTGAGGTCCCCAGGAATCCTTGTCGCAT 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGTGTCTCAGGCTGCTTCAAAGCCTGGGACCATGCAGGGGGGCTCTGTGAGGTCCCCAGGAATCCTTGTCGCAT 888
Query 702 GAGCTGCCAGAACCATGGACGTCTCAACATCAGCACCTGCCACTGCCACTGTCCCCCTGGCTACACGGGCAGAT 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAGCTGCCAGAACCATGGACGTCTCAACATCAGCACCTGCCACTGCCACTGTCCCCCTGGCTACACGGGCAGAT 962
Query 776 ACTGCCAAGTGAGGTGCAGCCTGCAGTGTGTGCACGGCCGGCTCCGGGAGGAGGAGTGCTCGTGCGTCTGTGAC 849
|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 963 ACTGCCAAGTGAGGTGCAGCCTGCAGTGTGTGCACGGCCGGTTCCGGGAGGAGGAGTGCTCGTGCGTCTGTGAC 1036
Query 850 ATCGGCTACGGGGGAGCCCAGTGTGCCACCAAGGTGCATTTTCCCTTCCACACCTGTGACCTGAGGATCGACGG 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATCGGCTACGGGGGAGCCCAGTGTGCCACCAAGGTGCATTTTCCCTTCCACACCTGTGACCTGAGGATCGACGG 1110
Query 924 AGACTGCTTCATGGTGTCTTCAGAGGCAGACACCTATTACAGAGCCAGGATGAAATGTCAGAGGA--------- 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1111 AGACTGCTTCATGGTGTCTTCAGAGGCAGACACCTATTACAGAGCCAGGATGAAATGTC--AGGAACCCTGGGC 1182
Query 989 -AAGGCGGGGTGCTGGCC--CAGAT--CAAGAGCCAGAAAGTG--CAGGACATCCTCGCCTTCTATCTGGGCCG 1055
|.|||| ||| ||| ||||| ||||.| .||| .||| |
Sbjct 1183 CATGGCG----GCT-GCCAGCAGATGGCAAGGG------TGTGTTGAGG------------------------G 1221
Query 1056 CCTGGAGACCACCAACGAG-GTGATTGACAG----TGAC-----TTCGAGACCAGGAACTTCTGGATC--GGGC 1117
|||||||.||| ||| |.| |.||| |.|| ||| ||.|||| ||..| ||||
Sbjct 1222 CCTGGAGCCCA-----GAGCGGG---GCCAGCTGCTCACCCCCTTTC----CCGGGAA-----GGGCCCAGGGC 1278
Query 1118 TCACCTACAAGACCGCCAAGGACTCCTTCCGCTGGGCCACAGGGGAGCACCAGGCCTTCACCAGTTTTGCCTTT 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1279 TCACCTACAAGACCGCCAAGGACTCCTTCCGCTGGGCCACAGGGGAGCACCAGGCCTTCACCAGTTTTGCCTTT 1352
Query 1192 GGGCAGCCTGACAACCACGGGTTTGGCAACTGCGTGGAGCTGCAGGCTTCAGCTGCCTTCAACTGGAACAACCA 1265
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 1353 GGGCAGCCTGACAACCACGGGTTTGGCAACTGCGTGGAGCTGCAGGCTTCAGCTGCCTTCAACTGGAACGACCA 1426
Query 1266 GCGCTGCAAAACCCGAAACCGTTACATCTGCCAGTTTGCCCAGGAGCACATCTCCCGGTGGGGCCCAGGGTCC- 1338
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1427 GCGCTGCAAAACCCGAAACCGTTACATCTGCCAGTTTGCCCAGGAGCACATCTCCCGGTGGGGCCCAGGGTCCT 1500
Query 1339 -------------------------------------------------------------------------- 1338
Sbjct 1501 GAGGCCTGACCACATGGCTCCCTCGCCTGCCCTGGGAGCACCGGCTCTGCTTACCTGTCTGCCCACCTGTCTGG 1574
Query 1339 -------------------------------------------------------------------------- 1338
Sbjct 1575 AACAAGGGCCAGGTTAAGATCACATGCCTCATGTCCAAAGAGGTCTCAGACCTTGCACAATGCCAGAAGTTGGG 1648
Query 1339 -------------------------------------------------------------------------- 1338
Sbjct 1649 CAGAGAGAGGCAGGGAGGCCAGTGAGGGCCAGGGAGTGAGTGTTAGAAGAAGCTGGGGCCCTTCGCCTGCTTTT 1722
Query 1339 -------------------------------------------------------------------------- 1338
Sbjct 1723 GATTGGGAAGATGGGCTTCAATTAGATGGCGAAGGAGAGGACACCGCCAGTGGTCCAAAAAGGCTGCTCTCTTC 1796
Query 1339 -------------------------------------------------------------------------- 1338
Sbjct 1797 CACCTGGCCCAGACCCTGTGGGGCAGCGGAGCTTCCCTGTGGCATGAACCCCACAGGGTATTAAATTATGAATC 1870
Query 1339 ------- 1338
Sbjct 1871 AGCTGAA 1877
