Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10057
- Subject:
- XR_001751905.1
- Aligned Length:
- 2021
- Identities:
- 1260
- Gaps:
- 737
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTCTGCCTGCTGTCGGGGGCGGGCTGGCCAGGCCGAGGCCGGAGCAGGCAGGCATCCCCGGGAGTTGTCTCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCATGCCAGCGCCAACAGGAGGCTGTCTGGACACACTGATTACTCACTCACCAGCCTCCTTCTTTTGTTCACC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCCCCCCTCTTTTGTCCACCAGCCCAGCCTGACTCCTGGAGATTGTGAATAGCTCCATCCAGCCTGAGAAACA 222
Query 1 -------------------------------------------------------ATGCTGCATCCAGAGACCT 19
|||||||||||||||||||
Sbjct 223 AGCCGGGTGGCTGAGCCAGGCTGTGCACGGAGCGCCTGACGGGCCCAACAGACCCATGCTGCATCCAGAGACCT 296
Query 20 CCCCTGGCCGGGGGCATCTCCTGGCTGTGCTCCTGGCCCTCCTTGGCACCGCCTGGGCAGAGGTGTGGCCACCC 93
||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 297 CCCCTGGCCGGGGGCATCTCCTGGCTGTGCTCCTGGCCCTCCTTGGCACCACCTGGGCAGAGGTGTGGCCACCC 370
Query 94 CAGCTGCAGGAGCAGGCTCCGATGGCCGGAGCCCTGAACAGGAAGGAGAGTTTCTTGCTCCTCTCCCTGCACAA 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAGCTGCAGGAGCAGGCTCCGATGGCCGGAGCCCTGAACAGGAAGGAGAGTTTCTTGCTCCTCTCCCTGCACAA 444
Query 168 CCGCCTGCGCAGCTGGGTCCAGCCCCCTGCGGCTGACATGCGGAGGCTGGACTGGAGTGACAGCCTGGCCCAGC 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 445 CCGCCTGCGCAGCTGGGTCCAGCCCCCTGCGGCTGACATGCGGAGGCTGGACTGGAGTGACAGCCTGGCCCAAC 518
Query 242 TGGCTCAAGCCAGGGCAGCCCTCTGTGGAACCCCAACCCCGAGCCTGGCGTCCGGCCTGTGGCGCACCCTGCAA 315
||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGGCTCAAGCCAGGGCAGCCCTCTGTGGAATCCCAACCCCGAGCCTGGCGTCCGGCCTGTGGCGCACCCTGCAA 592
Query 316 GTGGGCTGGAACATGCAGCTGCTACCCGCGGGCTTGGTGTCCTTTGTCGAAGTGGTCAGCCTATGGTTTGCAGA 389
|||||||||||||||||||||||.|||||||||||||.|||||||||.||||||||||||||.|||||||||||
Sbjct 593 GTGGGCTGGAACATGCAGCTGCTGCCCGCGGGCTTGGCGTCCTTTGTTGAAGTGGTCAGCCTGTGGTTTGCAGA 666
Query 390 GGGGCAGCGGTACAGCCACGCGGCAGGAGAGTGTGCTCGCAACGCCACCTGCACCCACTACACGCAGCTCGTGT 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGGGCAGCGGTACAGCCACGCGGCAGGAGAGTGTGCTCGCAACGCCACCTGCACCCACTACACGCAGCTCGTGT 740
Query 464 GGGCCACCTCAAGCCAGCTGGGCTGTGGGCGGCACCTGTGCTCTGCAGGCCAGGCAGCGATAGAAGCCTTTGTC 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 741 GGGCCACCTCAAGCCAGCTGGGCTGTGGGCGGCACCTGTGCTCTGCAGGCCAGACAGCGATAGAAGCCTTTGTC 814
Query 538 TGTGCCTACTCCCCCAGAGGCAACTGGGAGGTCAACGGGAAGACAATCGTCCCCTATAAGAAGGGTGCCTGGTG 611
|||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 815 TGTGCCTACTCCCCCGGAGGCAACTGGGAGGTCAACGGGAAGACAATCATCCCCTATAAGAAGGGTGCCTGGTG 888
Query 612 TTCGCTCTGCACAGCCAGTGTCTCAGGCTGCTTCAAAGCCTGGGACCATGCAGGGGGGCTCTGTGAGGTCCCCA 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTCGCTCTGCACAGCCAGTGTCTCAGGCTGCTTCAAAGCCTGGGACCATGCAGGGGGGCTCTGTGAGGTCCCCA 962
Query 686 GGAATCCTTGTCGCATGAGCTGCCAGAACCATGGACGTCTCAACATCAGCACCTGCCACTGCCACTGTCCCCCT 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGAATCCTTGTCGCATGAGCTGCCAGAACCATGGACGTCTCAACATCAGCACCTGCCACTGCCACTGTCCCCCT 1036
Query 760 GGCTACACGGGCAGATACTGCCAAGTGAGGTGCAGCCTGCAGTGTGTGCACGGCCGGCTCCGGGAGGAGGAGTG 833
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 1037 GGCTACACGGGCAGATACTGCCAAGTGAGGTGCAGCCTGCAGTGTGTGCACGGCCGGTTCCGGGAGGAGGAGTG 1110
Query 834 CTCGTGCGTCTGTGACATCGGCTACGGGGGAGCCCAGTGTGCCACCAAGGTGCATTTTCCCTTCCACACCTGTG 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTCGTGCGTCTGTGACATCGGCTACGGGGGAGCCCAGTGTGCCACCAAGGTGCATTTTCCCTTCCACACCTGTG 1184
Query 908 ACCTGAGGATCGACGGAGACTGCTTCATGGTGTCTTCAGAGGCAGACACCTATTACAGAGCCAGGATGAAATGT 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ACCTGAGGATCGACGGAGACTGCTTCATGGTGTCTTCAGAGGCAGACACCTATTACAGAGCCAGGATGAAATGT 1258
Query 982 CAGAGGA----------AAGGCGGGGTGCTGGCC--CAGAT--CAAGAGCCAGAAAGTG--CAGGACATCCTCG 1039
| |||| |.|||| ||| ||| ||||| ||||.| .||| .|||
Sbjct 1259 C--AGGAACCCTGGGCCATGGCG----GCT-GCCAGCAGATGGCAAGGG------TGTGTTGAGG--------- 1310
Query 1040 CCTTCTATCTGGGCCGCCTGGAGACCACCAACGAG-GTGATTGACAG----TGAC-----TTCGAGACCAGGAA 1103
||||||||.||| ||| |.| |.||| |.|| ||| ||.||.|
Sbjct 1311 ---------------GCCTGGAGCCCA-----GAGCGGG---GCCAGCTGCTCACCCCCTTTC----CCGGGGA 1357
Query 1104 CTTCTGGATC--GGGCTCACCTACAAGACCGCCAAGGACTCCTTCCGCTGGGCCACAGGGGAGCACCAGGCCTT 1175
||..| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1358 -----GGGCCCAGGGCTCACCTACAAGACCGCCAAGGACTCCTTCCGCTGGGCCACAGGGGAGCACCAGGCCTT 1426
Query 1176 CACCAGTTTTGCCTTTGGGCAGCCTGACAACCACGGGTTTGGCAACTGCGTGGAGCTGCAGGCTTCAGCTGCCT 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1427 CACCAGTTTTGCCTTTGGGCAGCCTGACAACCACGGGTTTGGCAACTGCGTGGAGCTGCAGGCTTCAGCTGCCT 1500
Query 1250 TCAACTGGAACAACCAGCGCTGCAAAACCCGAAACCGTTACATCTGCCAGTTTGCCCAGGAGCACATCTCCCGG 1323
|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1501 TCAACTGGAACGACCAGCGCTGCAAAACCCGAAACCGTTACATCTGCCAGTTTGCCCAGGAGCACATCTCCCGG 1574
Query 1324 TGGGGCCCAGGGTCC----------------------------------------------------------- 1338
|||||||||||||||
Sbjct 1575 TGGGGCCCAGGGTCCTGAGGCCTGACCACATGGCTCCCTCGCCTGCCCTGGGAGCACCGGCTCTGCTTACCTGT 1648
Query 1339 -------------------------------------------------------------------------- 1338
Sbjct 1649 CTGCCCACCTGTCTGGAACAAGGGCCAGGTTAAGACCACATGCCTCATGTCCAAAGAGGTCTCAGACCTTGCAC 1722
Query 1339 -------------------------------------------------------------------------- 1338
Sbjct 1723 AATGCCAGAAGTTGGGCAGAGAGAGGCAGGGAGGCCAGTGAGGGCCAGGGAGTGAGTGTTAGAAGAAGCTGGGG 1796
Query 1339 -------------------------------------------------------------------------- 1338
Sbjct 1797 CCCTTCGCCTGCTTTTGATTGGGAAGATGGGCTTCAATTAGATGGCGAAGGAGAGGACACCGCCAGTGGTCCAA 1870
Query 1339 -------------------------------------------------------------------------- 1338
Sbjct 1871 AAAGGCTGCTCTCTTCCACCTGGCCCAGACCCTGTGGGGCAGCGGAGCTTCCCTGTGGCATGAACCCCACGGGG 1944
Query 1339 ----------------------- 1338
Sbjct 1945 TATTAAATTATGAATCAGCTGAA 1967
