Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10057
- Subject:
- XR_002957800.1
- Aligned Length:
- 1903
- Identities:
- 1229
- Gaps:
- 672
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCTTTTCATGCCAGCGCCAACAGGAGGCTGTCTGGACACACTGATTACTCACTCACCAGCCTCCCTCTTTTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCACCAGCCCAGCCTGACTCCTGGAGATTGTGAATAGCTCCATCCAGCCTGAGAAACAAGCCGGGTGGCTGAGC 148
Query 1 ---------------------------------------ATGCTGCATCCAGAGACCTCCCCTGGCCGGGGGCA 35
|||||||||||||||||||||||||||||||||||
Sbjct 149 CAGGCTGTGCACGGAGCGCCTGACGGGCCCAACAGACCCATGCTGCATCCAGAGACCTCCCCTGGCCGGGGGCA 222
Query 36 TCTCCTGGCTGTGCTCCTGGCCCTCCTTGGCACCGCCTGGGCAGAGGTGTGGCCACCCCAGCTGCAGGAGCAGG 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCTCCTGGCTGTGCTCCTGGCCCTCCTTGGCACCGCCTGGGCAGAGGTGTGGCCACCCCAGCTGCAGGAGCAGG 296
Query 110 CTCCGATGGCCGGAGCCCTGAACAGGAAGGAGAGTTTCTTGCTCCTCTCCCTGCACAACCGCCTGCGCAGCTGG 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTCCGATGGCCGGAGCCCTGAACAGGAAGGAGAGTTTCTTGCTCCTCTCCCTGCACAACCGCCTGCGCAGCTGG 370
Query 184 GTCCAGCCCCCTGCGGCTGACATGCGGAGGCTGGACTGGAGTGACAGCCTGGCCCAGCTGGCTCAAGCCAGGGC 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTCCAGCCCCCTGCGGCTGACATGCGGAGGCTGGACTGGAGTGACAGCCTGGCCCAGCTGGCTCAAGCCAGGGC 444
Query 258 AGCCCTCTGTGGAACCCCAACCCCGAGCCTGGCGTCCGGCCTGTGGCGCACCCTGCAAGTGGGCTGGAACATGC 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGCCCTCTGTGGAACCCCAACCCCGAGCCTGGCGTCCGGCCTGTGGCGCACCCTGCAAGTGGGCTGGAACATGC 518
Query 332 AGCTGCTACCCGCGGGCTTGGTGTCCTTTGTCGAAGTGGTCAGCCTATGGTTTGCAGAGGGGCAGCGGTACAGC 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGCTGCTACCCGCGGGCTTGGTGTCCTTTGTCGAAGTGGTCAGCCTATGGTTTGCAGAGGGGCAGCGGTACAGC 592
Query 406 CACGCGGCAGGAGAGTGTGCTCGCAACGCCACCTGCACCCACTACACGCAGCTCGTGTGGGCCACCTCAAGCCA 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CACGCGGCAGGAGAGTGTGCTCGCAACGCCACCTGCACCCACTACACGCAGCTCGTGTGGGCCACCTCAAGCCA 666
Query 480 GCTGGGCTGTGGGCGGCACCTGTGCTCTGCAGGCCAGGCAGCGATAGAAGCCTTTGTCTGTGCCTACTCCCCCA 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCTGGGCTGTGGGCGGCACCTGTGCTCTGCAGGCCAGGCAGCGATAGAAGCCTTTGTCTGTGCCTACTCCCCCA 740
Query 554 GAGGCAACTGGGAGGTCAACGGGAAGACAATCGTCCCCTATAAGAAGGGTGCCTGGTGTTCGCTCTGCACAGCC 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GAGGCAACTGGGAGGTCAACGGGAAGACAATCGTCCCCTATAAGAAGGGTGCCTGGTGTTCGCTCTGCACAGCC 814
Query 628 AGTGTCTCAGGCTGCTTCAAAGCCTGGGACCATGCAGGGGGGCTCTGTGAGGTCCCCAGGAATCCTTGTCGCAT 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGTGTCTCAGGCTGCTTCAAAGCCTGGGACCATGCAGGGGGGCTCTGTGAGGTCCCCAGGAATCCTTGTCGCAT 888
Query 702 GAGCTGCCAGAACCATGGACGTCTCAACATCAGCACCTGCCACTGCCACTGTCCCCCTGGCTACACGGGCAGAT 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAGCTGCCAGAACCATGGACGTCTCAACATCAGCACCTGCCACTGCCACTGTCCCCCTGGCTACACGGGCAGAT 962
Query 776 ACTGCCAAGTGAGGTGCAGCCTGCAGTGTGTGCACGGCCGGCTCCGGGAGGAGGAGTGCTCGTGCGTCTGTGAC 849
|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 963 ACTGCCAAGTGAGGTGCAGCCTGCAGTGTGTGCACGGCCGGTTCCGGGAGGAGGAGTGCTCGTGCGTCTGTGAC 1036
Query 850 ATCGGCTACGGGGGAGCCCAGTGTGCCACCAAGGTGCATTTTCCCTTCCACACCTGTGACCTGAGGATCGACGG 923
||||||||||||||||||||||||||||
Sbjct 1037 ATCGGCTACGGGGGAGCCCAGTGTGCCA---------------------------------------------- 1064
Query 924 AGACTGCTTCATGGTGTCTTCAGAGGCAGACACCTATTACAGAGCCAGGATGAAATGTCAGAGGAAAGGCGGGG 997
|||||||||||||
Sbjct 1065 -------------------------------------------------------------AGGAAAGGCGGGG 1077
Query 998 TGCTGGCCCAGATCAAGAGCCAGAAAGTGCAGGACATCCTCGCCTTCTATCTGGGCCGCCTGGAGACCACCAAC 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1078 TGCTGGCCCAGATCAAGAGCCAGAAAGTGCAGGACATCCTCGCCTTCTATCTGGGCCGCCTGGAGACCACCAAC 1151
Query 1072 GAGGTGATTGACAGTGACTTCGAGACCAGGAACTTCTGGATCGGGCTCACCTACAAGACCGCCAAGGACTCCTT 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1152 GAGGTGATTGACAGTGACTTCGAGACCAGGAACTTCTGGATCGGGCTCACCTACAAGACCGCCAAGGACTCCTT 1225
Query 1146 CCGCTGGGCCACAGGGGAGCACCAGGCCTTCACCAGTTTTGCCTTTGGGCAGCCTGACAACCACGGGTTTGGCA 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1226 CCGCTGGGCCACAGGGGAGCACCAGGCCTTCACCAGTTTTGCCTTTGGGCAGCCTGACAACCACGGGTTTGGCA 1299
Query 1220 ACTGCGTGGAGCTGCAGGCTTCAGCTGCCTTCAACTGGAACAACCAGCGCTGCAAAACCCGAAACCGTTACATC 1293
|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 1300 ACTGCGTGGAGCTGCAGGCTTCAGCTGCCTTCAACTGGAACGACCAGCGCTGCAAAACCCGAAACCGTTACATC 1373
Query 1294 TGCCAGTTTGCCCAGGAGCACATCTCCCGGTGGGGCCCAGGGTCC----------------------------- 1338
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1374 TGCCAGTTTGCCCAGGAGCACATCTCCCGGTGGGGCCCAGGGTCCTGAGGCCTGACCACATGGCTCCCTCGCCT 1447
Query 1339 -------------------------------------------------------------------------- 1338
Sbjct 1448 GCCCTGGGAGCACCGGCTCTGCTTACCTGTCTGCCCACCTGTCTGGAACAAGGGCCAGGTTAAGATCACATGCC 1521
Query 1339 -------------------------------------------------------------------------- 1338
Sbjct 1522 TCATGTCCAAAGAGGTCTCAGACCTTGCACAATGCCAGAAGTTGGGCAGAGAGAGGCAGGGAGGCCAGTGAGGG 1595
Query 1339 -------------------------------------------------------------------------- 1338
Sbjct 1596 CCAGGGAGTGAGTGTTAGAAGAAGCTGGGGCCCTTCGCCTGCTTTTGATTGGGAAGATGGGCTTCAATTAGATG 1669
Query 1339 -------------------------------------------------------------------------- 1338
Sbjct 1670 GCGAAGGAGAGGACACCGCCAGTGGTCCAAAAAGGCTGCTCTCTTCCACCTGGCCCAGACCCTGTGGGGCAGCG 1743
Query 1339 ----------------------------------------------------- 1338
Sbjct 1744 GAGCTTCCCTGTGGCATGAACCCCACAGGGTATTAAATTATGAATCAGCTGAA 1796
