Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10057
- Subject:
- XR_002957808.1
- Aligned Length:
- 2688
- Identities:
- 1219
- Gaps:
- 1457
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTTTCTGAGAAACTTGGCCCATGGTGCAGATCTGCTCCAGCTCACTCTGGTGGGATCACGCCAGCCACGGCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCACGGCACATCATGGCAACGTGCTGCCCACCTGCTACGCCGCCTGTTTTTCTAGAGGCGGACGTGATCCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAGGACTGGAGTCAGCCCAGGGCATCACGTGCTCTGGTCCCCGCCTGCTTTGACTCCTCCTGCCTCACTCCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCTGGCCTGTAGTCACGTGGGTGAGGGTGGTGGGCACCGGGGCTGGGCCCAGCCCCCGACCCTGCCCAGACAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACTTTCCTAAGGCACCCTTTTCCTCGTGCAGCCCCCCTCTTTTGTCCACCAGCCCAGCCTGACTCCTGGAGATT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGAATAGCTCCATCCAGCCTGAGAAACAAGCCGGGTGGCTGAGCCAGGCTGTGCACGGAGCGCCTGACGGGCC 444
Query 1 ----------ATGCTGCATCCAGAGACCTCCCCTGGCCGGGGGCATCTCCTGGCTGTGCTCCTGGCCCTCCTTG 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAACAGACCCATGCTGCATCCAGAGACCTCCCCTGGCCGGGGGCATCTCCTGGCTGTGCTCCTGGCCCTCCTTG 518
Query 65 GCACCGCCTGGGCAGAGGTGTGGCCACCCCAGCTGCAGGAGCAGGCTCCGATGGCCGGAGCCCTGAACAGGAAG 138
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCACCACCTGGGCAGAGGTGTGGCCACCCCAGCTGCAGGAGCAGGCTCCGATGGCCGGAGCCCTGAACAGGAAG 592
Query 139 GAGAGTTTCTTGCTCCTCTCCCTGCACAACCGCCTGCGCAGCTGGGTCCAGCCCCCTGCGGCTGACATGCGGAG 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAGAGTTTCTTGCTCCTCTCCCTGCACAACCGCCTGCGCAGCTGGGTCCAGCCCCCTGCGGCTGACATGCGGAG 666
Query 213 GCTGGACTGGAGTGACAGCCTGGCCCAGCTGGCTCAAGCCAGGGCAGCCCTCTGTGGAACCCCAACCCCGAGCC 286
|||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 667 GCTGGACTGGAGTGACAGCCTGGCCCAACTGGCTCAAGCCAGGGCAGCCCTCTGTGGAATCCCAACCCCGAGCC 740
Query 287 TGGCGTCCGGCCTGTGGCGCACCCTGCAAGTGGGCTGGAACATGCAGCTGCTACCCGCGGGCTTGGTGTCCTTT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||.|||||||
Sbjct 741 TGGCGTCCGGCCTGTGGCGCACCCTGCAAGTGGGCTGGAACATGCAGCTGCTGCCCGCGGGCTTGGCGTCCTTT 814
Query 361 GTCGAAGTGGTCAGCCTATGGTTTGCAGAGGGGCAGCGGTACAGCCACGCGGCAGGAGAGTGTGCTCGCAACGC 434
||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTTGAAGTGGTCAGCCTGTGGTTTGCAGAGGGGCAGCGGTACAGCCACGCGGCAGGAGAGTGTGCTCGCAACGC 888
Query 435 CACCTGCACCCACTACACGCAGCTCGTGTGGGCCACCTCAAGCCAGCTGGGCTGTGGGCGGCACCTGTGCTCTG 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CACCTGCACCCACTACACGCAGCTCGTGTGGGCCACCTCAAGCCAGCTGGGCTGTGGGCGGCACCTGTGCTCTG 962
Query 509 CAGGCCAGGCAGCGATAGAAGCCTTTGTCTGTGCCTACTCCCCCAGAGGCAACTGGGAGGTCAACGGGAAGACA 582
||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 963 CAGGCCAGACAGCGATAGAAGCCTTTGTCTGTGCCTACTCCCCCGGAGGCAACTGGGAGGTCAACGGGAAGACA 1036
Query 583 ATCGTCCCCTATAAGAAGGGTGCCTGGTGTTCGCTCTGCACAGCCAGTGTCTCAGGCTGCTTCAAAGCCTGGGA 656
|||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATCATCCCCTATAAGAAGGGTGCCTGGTGTTCGCTCTGCACAGCCAGTGTCTCAGGCTGCTTCAAAGCCTGGGA 1110
Query 657 CCATGCAGGGGGGCTCTGTGAGGTCCCCAGGAATCCTTGTCGCATGAGCTGCCAGAACCATGGACGTCTCAACA 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCATGCAGGGGGGCTCTGTGAGGTCCCCAGGAATCCTTGTCGCATGAGCTGCCAGAACCATGGACGTCTCAACA 1184
Query 731 TCAGCACCTGCCACTGCCACTGTCCCCCTGGCTACACGGGCAGATACTGCCAAGTGAGGTGCAGCCTGCAGTGT 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TCAGCACCTGCCACTGCCACTGTCCCCCTGGCTACACGGGCAGATACTGCCAAGTGAGGTGCAGCCTGCAGTGT 1258
Query 805 GTGCACGGCCGGCTCCGGGAGGAGGAGTGCTCGTGCGTCTGTGACATCGGCTACGGGGGAGCCCAGTGTGCCAC 878
||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GTGCACGGCCGGTTCCGGGAGGAGGAGTGCTCGTGCGTCTGTGACATCGGCTACGGGGGAGCCCAGTGTGCCA- 1331
Query 879 CAAGGTGCATTTTCCCTTCCACACCTGTGACCTGAGGATCGACGGAGACTGCTTCATGGTGTCTTCAGAGGCAG 952
Sbjct 1332 -------------------------------------------------------------------------- 1331
Query 953 ACACCTATTACAGAGCCAGGATGAAATGTCAGAGGAAAGGCGGGGTGCTGGCCCAGATCAAGAGCCAGAAAGTG 1026
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332 --------------------------------AGGAAAGGCGGGGTGCTGGCCCAGATCAAGAGCCAGAAAGTG 1373
Query 1027 CAGGACATCCTCGCCTTCTATCTGGGCCGCCTGGAGACCACCAACGAGGTGATTGACAGTGACTTCGAGACCAG 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1374 CAGGACATCCTCGCCTTCTATCTGGGCCGCCTGGAGACCACCAACGAGGTGATTGACAGTGACTTCGAGACCAG 1447
Query 1101 GAACTTCTGGATCGGGCTCACCTACAAGACCGCCAAGGACTCCTTCCGCTGGGCCACAGGGGAGCACCAGGCCT 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1448 GAACTTCTGGATCGGGCTCACCTACAAGACCGCCAAGGACTCCTTCCGCTGGGCCACAGGGGAGCACCAGGCCT 1521
Query 1175 TCACCAGTTTTGCCTTTGGGCAGCCTGACAACCACG-------------------------------------- 1210
||||||||||||||||||||||||||||||||||||
Sbjct 1522 TCACCAGTTTTGCCTTTGGGCAGCCTGACAACCACGGGTAAGTGTGGGGTGCCTCCCTCCCCTGGGCCTCCTTC 1595
Query 1211 -------------------------------------------------------------------------- 1210
Sbjct 1596 TCACTTGGGCCTGCCTGGTGGAGCCCCCCCATCCCGCTGCCTGGCTGGGCCCTTTGAGGGTCTGATCCTTCCCT 1669
Query 1211 -------------------------------------------------------------------------- 1210
Sbjct 1670 GGTGCCTGCCCAGGTGCCAGAGAGTTGTGGGCACAGCTGGTGTGGGCCGGTGGTGGGGTGAGGGAGATGCAAGC 1743
Query 1211 -------------------------------------------------------------------------- 1210
Sbjct 1744 CGGAAGGCACGTCACGTGGGGGAGAGAGGGACCCAGGAAGCCTCCATCCATCTGTCCATCCCCAGTGTCCCCTG 1817
Query 1211 -------------------------------------------------------------------------- 1210
Sbjct 1818 GCTGTGACTCCATCCCTCCAATTCTCATCCACTCACCCCTCCCTCTGCATGCCCTCTGCCTGCATCAGTTACAC 1891
Query 1211 -------------------------------------------------------------------------- 1210
Sbjct 1892 TGATGCCAGCATTCCTTAGCTGTCACCCACCTGCACTCATTCACAATACAACCCTGCACCTGCAGACCCACCAG 1965
Query 1211 -------------------------------------------------------------------------- 1210
Sbjct 1966 CCATCCTGTAGCAAGAACCCTCTGGTCACGTGGCCCCACCCTGCTCTTCAAAGCCCAGCAATGCCCAGGGCCAG 2039
Query 1211 -------------------------------------------------------------------------- 1210
Sbjct 2040 GGTGGAGGTGGTCCGGCTGCGAGGCCACCAAGGGCTCCAGCGATTTCAGCCAGCCCTCCTTGCCAACAGCCGGC 2113
Query 1211 -------------------------------------------------------------------------- 1210
Sbjct 2114 CTGTGCCCCTGGCCTCTTGCCTGGAGGAAGTCTGGGCCTTGTTGGGTTCCCAGGTGTACCTCTCAAGTGGGCTG 2187
Query 1211 -------------------------------------------------------------------------- 1210
Sbjct 2188 TCTATTCCAATCCCCACCATCCCCACAGGCTGGTGTGGCTGAGTGCTGCCATGGGGTAGGCAGAGCTGTTAACC 2261
Query 1211 -------------------------------------------------------------------------- 1210
Sbjct 2262 CAGGAAGGGGCTTCCCTGAGAAGTGGAGCAGGGCTGGGGGCTTGGGGACGGGCCTGGCTCCCAGCAGCCCCGTC 2335
Query 1211 -------------------------------------------------------------------------- 1210
Sbjct 2336 GGCAGGTGGGGGCACTGGAGCCCCTGAGATGCAGGGTCCTGATGGGTGGAGGGCTTAGGCCTCTCCCGGATCCC 2409
Query 1211 ------------------------------------------GGTTTGGCAACTGCGTGGAGCTGCAGGCTTCA 1242
||||||||||||||||||||||||||||||||
Sbjct 2410 TGACTTCACTCTTGCCTCCTGACCACCACACCCTGGCCTGCAGGTTTGGCAACTGCGTGGAGCTGCAGGCTTCA 2483
Query 1243 GCTGCCTTCAACTGGAACAACCAGCGCTGCAAAACCCGAAACCGTTACATCTGCCAGTTTGCCCAGGAGCACAT 1316
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2484 GCTGCCTTCAACTGGAACGACCAGCGCTGCAAAACCCGAAACCGTTACATCTGCCAGTTTGCCCAGGAGCACAT 2557
Query 1317 CTCCCGGTGGGGCCCAGGGTCC-- 1338
||||||||||||||||||||||
Sbjct 2558 CTCCCGGTGGGGCCCAGGGTCCTG 2581
