Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10086
- Subject:
- XM_011539572.2
- Aligned Length:
- 4034
- Identities:
- 2129
- Gaps:
- 1858
Alignment
Query 1 ATGATGAACCGGACGACCCCCGACCAGGAGCTGGCGCCAGCGTCGGAGCCCGTGTGGGAGCGGCCGTGGTCGGT 74
||||||||||||||||||||||||||||||||||.|||.|||||||||||||||||||||||||||||||||||
Sbjct 1 ATGATGAACCGGACGACCCCCGACCAGGAGCTGGTGCCGGCGTCGGAGCCCGTGTGGGAGCGGCCGTGGTCGGT 74
Query 75 GGAGGAGATCCGCAGGAGCAGCCAGAGCTGGTCGCTGGCGGCCGACGCGGGCCTACTACAGTTTCTACAGGAAT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGAGGAGATCCGCAGGAGCAGCCAGAGCTGGTCGCTGGCGGCCGACGCGGGCCTACTACAGTTTCTACAGGAAT 148
Query 149 TCTCACAGCAAACTATCTCTAGGACCCATGAAATCAAGAAACAAGTGGACGGACTAATTCGGGAAACCAAAGCC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 149 TCTCACAGCAAACTATCTCTAGGACCCATGAAATCAAGAAACAAGTGGACGGACTAATCCGGGAAACCAAAGCC 222
Query 223 ACAGATTGTCGCCTGCATAATGTCTTCAATGACTTCCTTATGCTCTCTAATACCCAGTTCATTGAGAATCGTGT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 223 ACAGATTGTCGCCTGCATAATGTCTTCAATGACTTCCTTATGCTCTCTAATACCCAGTTCATAGAGAATCGTGT 296
Query 297 ATATGATGAAGAAGTGGAGGAGCCAGTACTCAAGGCTGAGGCAGAAAAAACAGAGCAGGAGAAGACACGAGAGC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ATATGATGAAGAAGTGGAGGAGCCAGTACTCAAGGCTGAGGCAGAAAAAACAGAGCAGGAGAAGACACGAGAGC 370
Query 371 AGAAAGAAGTAGATCTCATTCCTAAAGTCCAGGAGGCTGTGAACTATGGCTTACAAGTATTGGACAGTGCCTTT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGAAAGAAGTAGATCTCATTCCTAAAGTCCAGGAGGCTGTGAACTATGGCTTACAAGTATTGGACAGTGCCTTT 444
Query 445 GAGCAACTTGATATCAAAGCAGGAAACTCAGACTCCGAGGAAGATGATGCTAATGGGCGGGTGGAACTGATCCT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGCAACTTGATATCAAAGCAGGAAACTCAGACTCCGAGGAAGATGATGCTAATGGGCGGGTGGAACTGATCCT 518
Query 519 TGAACCAAAGGATCTATACATTGATCGTCCTTTACCATATCTCATTGGGTCAAAGCTGTTCATGGAACAAGAAG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGAACCAAAGGATCTATACATTGATCGTCCTTTACCATATCTCATTGGGTCAAAGCTGTTCATGGAACAAGAAG 592
Query 593 ATGTAGGTCTTGGAGAGCTGTCCAGTGAAGAAGGCTCTGTAGGCAGTGATCGTGGCAGTATTGTGGACACTGAG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATGTAGGTCTTGGAGAGCTGTCCAGTGAAGAAGGCTCTGTAGGCAGTGATCGTGGCAGTATTGTGGACACTGAG 666
Query 667 GAAGAGAAAGAAGAGGAGGAGTCAGATGAAGATTTTGCCCATCATAGTGACAATGAACAAAACCGGCACACCAC 740
||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||.|||||||||
Sbjct 667 GAAGAGAAAGAAGAGGAGGAGTCAGATGAAGATTTTGCCCATCACAGTGACAATGAACAAAACCAGCACACCAC 740
Query 741 ACAAATGAGTGATGAGGAAGAGGATGATGATGGCTGTGACCTTTTCGCTGACTCTGAGAAGGAGGAGGAAGATA 814
|||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 741 ACAAATGAGTGATGAGGAAGAGGATGATGATGGCTGTGACCTTTTTGCTGACTCTGAGAAGGAGGAGGAAGATA 814
Query 815 TTGAGGACATTGAAGAAAATACTAGACCTAAAAGAAGCAGACCTACATCGTTTGCAGATGAGCTGGCTGCCCGC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTGAGGACATTGAAGAAAATACTAGACCTAAAAGAAGCAGACCTACATCGTTTGCAGATGAGCTGGCTGCCCGC 888
Query 889 ATCAAGGGGGATGCCGTGGGTCGAGTGGACGAGGAGCCGACAACCTTACCCTCAGGAGAAGCAAAACCTCGGAA 962
|||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATCAAGGGGGATGCCATGGGTCGAGTGGACGAGGAGCCGACAACCTTACCCTCAGGAGAAGCAAAACCTCGGAA 962
Query 963 GACACTCAAAGAGAAGAAGGAAAGGAGAACTCCTTCAGACGATGAAGAGGATAACTTATTCGCACCCCCCAAGC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GACACTCAAAGAGAAGAAGGAAAGGAGAACTCCTTCAGACGATGAAGAGGATAACTTATTCGCACCCCCCAAGC 1036
Query 1037 TGACCGACGAGGACTTCTCGCCATTTGGCTCTGGAGGTGGCCTGTTCAGTGGGGGCAAGGGGCTCTTTGATGAT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||
Sbjct 1037 TGACCGACGAGGACTTCTCGCCATTTGGCTCTGGAGGTGGCCTGTTCAGTGGCGGCAAGGGGCTATTTGATGAT 1110
Query 1111 GAGGACGAGGAGAGTGACCTCTTCACGGAAGCCCCCCAGGATCGGCAAGCTGGAGCCTCTGTTAAGGAGGAGTC 1184
|||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GAGGACGAGGAGAGTGACCTCTTCACGGAAGCCTCCCAGGATCGGCAAGCTGGAGCCTCTGTTAAGGAGGAGTC 1184
Query 1185 TTCATCATCCAAACCTGGAAAGAAAATCCCAGCAGGAGCTGTTTCTGTATTTTTAGGAGACACGGATGTGTTTG 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TTCATCATCCAAACCTGGAAAGAAAATCCCAGCAGGAGCTGTTTCTGTATTTTTAGGAGACACGGATGTGTTTG 1258
Query 1259 GTGCTGCCTCCGTTCCATCAATGAAGGAGCCACAGAAGCCTGAGCAGCCCACTCCAAGGAAAAGCCCCTATGGT 1332
||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GTGCTGCCTCCGTTCCATCACTGAAGGAGCCACAGAAGCCTGAGCAGCCCACTCCAAGGAAAAGCCCCTATGGT 1332
Query 1333 CCCCCTCCCACTGGCCTCTTTGATGATGATGATGGTGATGATGATGACGACTTTTTCTCGGCACCCCACAGCAA 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCCCCTCCCACTGGCCTCTTTGATGATGATGATGGTGATGATGATGACGACTTTTTCTCGGCACCCCACAGCAA 1406
Query 1407 ACCTTCTAAAACAGGCAAAGTCCAATCCACTGCCGATATCTTTGGTGACGAAGAAGGAGATCTGTTCAAAGAAA 1480
|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ACCTTCTAAAACACGCAAAGTCCAATCCACTGCCGATATCTTTGGTGACGAAGAAGGAGATCTGTTCAAAGAAA 1480
Query 1481 AAGCCGTAGCATCGCCAGAAGCCACTGTGAGTCAGACAGATGAAAATAAAGCAAGAGCAGAAAAAAAGGTTACC 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AAGCCGTAGCATCGCCAGAAGCCACTGTGAGTCAGACAGATGAAAATAAAGCAAGAGCAGAAAAAAAGGTTACC 1554
Query 1555 TTATCTTCCAGCAAAAATCTCAAGCCCTCATCAGAAACAAAGACTCAAAAAGGCTTATTTTCAGATGAGGAGGA 1628
|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TTATCTTACAGCAAAAATCTCAAGCCCTCATCAGAAACAAAGACTCAAAAAGGCTTATTTTCAGATGAGGAGGA 1628
Query 1629 CTCTGAGGATTTGTTTTCTTCTCAAAGTGCGAGTAAGTTAAAAGGTGCGTCTCTGCTGCCTGGCAAGCTCCCCA 1702
||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||||
Sbjct 1629 CTCTGAGGATTTGTTTTCTTCTCAAAGTGCGAGTAACTTAAAAGGTGCATCTCTGCTGCCTGGCAAGCTCCCCA 1702
Query 1703 CGTTGGTTTCCCTGTTTGATGATGAAGATGAAGAGGATAATCTTTTTGGGGGTACAGCTGCTAAGAAGCAGACA 1776
|||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CGTCGGTTTCCCTGTTTGATGATGAAGATGAAGAGGATAATCTTTTTGGGGGTACAGCTGCTAAGAAGCAGACA 1776
Query 1777 TTGTGTCTACAAGCTCAGAGAGAAGAGAAAGCAAAAGCCTCCGAGCTCTCCAAAAAGAAAGCATCTGCCCTGTT 1850
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TTGTCTCTACAAGCTCAGAGAGAAGAGAAAGCAAAAGCCTCCGAGCTCTCCAAAAAGAAAGCATCTGCCCTGTT 1850
Query 1851 GTTCAGCAGTGATGAGGAGGACCAGTGGAATATTCCTGCTTCACAGACCCACTTAGCATCTGACAGCAGGTCTA 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GTTCAGCAGTGATGAGGAGGACCAGTGGAATATTCCTGCTTCACAGACCCACTTAGCATCTGACAGCAGGTCTA 1924
Query 1925 AAGGAGAACCCAGGGATTCTGGGACCCTCCAGAGCCAGGAGGCCAAGGCTGTGAAAAAGACCAGTCTCTTTGAG 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AAGGAGAACCCAGGGATTCTGGGACCCTCCAGAGCCAGGAGGCCAAGGCTGTGAAAAAGACCAGTCTCTTTGAG 1998
Query 1999 GAAGACGAAGAAGATGATCTTTTTGCCATTGCCAAGGACAGCCAAAAGAAGACCCAGAGAGTGTCACTCCTCTT 2072
||||||.||||||||||||||||||||||||||||||||||..|.| ||||
Sbjct 1999 GAAGACAAAGAAGATGATCTTTTTGCCATTGCCAAGGACAGATACA---------------------TCCT--- 2048
Query 2073 TGAAGACGATGTTGATAGCGGAGGCTCTCTGTTTGGCTCTCCTCCCACATCTGTTCCTCCTGCAACAAAGAAAA 2146
|| ||||| || |||||| |.|||
Sbjct 2049 -----AC-------------------------------CTCCT-----AT-TGTTCC--------CGAAG---- 2068
Query 2147 AAGAGACTGTCTCTGAGGCACCACCTTTGCTGTTCAGCGATGAAGAAGAGAAGGAGGCACAACTTGGAGTGAAG 2220
.|||||.| ||..|||..||| ||| ||| ||| ||.
Sbjct 2069 ------TTGTCTGT-------CAAGTTTTGTGT------ATG--GAA--------------------AGT-AAT 2100
Query 2221 TCTGTGGATAAGAAGGTTGAGAGTGCCAAGGAGTCATTAAAATTTGGGAGAACTGATGTGGCTGAGTCAGA--- 2291
|| ||| |.||.| |||||
Sbjct 2101 TC-----ATA------------------------CCTTCA--------------------------TCAGATCT 2119
Query 2292 -AAAGGAAGGACTTTTGACTAGATCTGCTCAGGAAACAGTCAAGCATTCTGATTTATTTTCTTCATCATCCCCA 2364
|||.|||| ||||..|| .|.||.|||..|||
Sbjct 2120 CAAAAGAAG--CTTTACAC-------ACACAAGAAGAAGT---------------------------------- 2150
Query 2365 TGGGACAAAGGAACCAAGCCTAGAACCAAA-------ACTGTTCTTAGCTTGTTTGATGAGGAAGAGGATAAAA 2431
||.|.||||.|| |||.|||.| |||..||||
Sbjct 2151 TGAGCCAAAAGA---------AGACCCAGAGAGTGTCACTCCTCTT---------------------------- 2187
Query 2432 TGGAAGATCAAAACATTATCCAGGCTCCACAGAAAGAAGTAGGAAAGGGCCGCGATCCTGATGCCCACCCCAAG 2505
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 2506 AGCACAGGTGTCTTCCAGGATGAAGAGCTGCTTTTCAGCCACAAGCTCCAAAAGGACAATGACCCAGATGTTGA 2579
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 2580 CCTTTTTGCTGGCACCAAAAAAACCAAGCTGTTAGAGCCAAGTGTTGGGAGCCTGTTTGGGGATGATGAAGATG 2653
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 2654 ATGATCTTTTCAGCTCTGCCAAGTCCCAGCCTTTGGTACAAGAGAAAAAGAGAGTAGTGAAAAAAGACCACTCT 2727
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 2728 GTTGACTCTTTCAAAAACCAGAAACATCCTGAATCCATTCAAGGTAGTAAAGAAAAAGGCATATGGAAGCCGGA 2801
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 2802 AACACCTCAGGACTCATCAGGTCTCGCTCCATTTAAAACCAAAGAACCATCCACTCGGATCGGGAAGATACAAG 2875
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 2876 CAAATTTAGCGATCAACCCAGCGGCCTTGCTGCCCACAGCGGCTTCCCAGATCTCTGAAGTAAAGCCTGTTTTG 2949
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 2950 CCAGAATTGGCTTTTCCTTCATCTGAACACAGAAGGAGCTACGGTCTGGAAAGTGTGCCTGTCCTTCCCGGGAG 3023
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 3024 TGGGGAGGCCGGTGTGAGTTTTGATCTTCCAGCTCAGGCAGACACCTTACACAGTGCAAACAAGAGCCGTGTCA 3097
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 3098 AGATGAGAGGGAAGCGTAGACCGCAGACCCGTGCAGCTAGGCGGCTGGCTGCTCAGGAGTCCAGCGAGACTGAG 3171
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 3172 GACATGAGCGTCCCCAGAGGACCCATTGCACAGTGGGCTGATGGCGCCATTTCCCCAAATGGCCATCGGCCACA 3245
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 3246 GCTCAGAGCAGCCAGTGGAGAAGACAGCACTGAGGAGGCCCTGGCAGCTGCCGCTGCACCTTGGGAAGGTGGTC 3319
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 3320 CTGTGCCTGGAGTGGACAGAAGCCCCTTTGCAAAGTCTCTGGGTCATTCCAGAGGGGAGGCTGACCTTTTTGAT 3393
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 3394 TCTGGGGACATCTTTTCCACGGGCACTGGATCTCAGTCTGTGGAGAGAACAAAACCCAAGGCAAAGATAGCAGA 3467
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 3468 GAATCCTGCCAACCCACCAGTGGGTGGTAAAGCAAAGAGCCCCATGTTTCCTGCTCTAGGTGAGGCCAGCAGTG 3541
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 3542 ATGATGATCTCTTTCAGTCTGCTAAACCAAAACCAGCAAAGAAAACAAATCCCTTTCCTCTCCTGGAAGATGAG 3615
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 3616 GATGACCTCTTTACAGATCAGAAAGTCAAGAAGAATGAGACAAAATCCAATAGTCAGCAGGATGTCATATTAAC 3689
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 3690 AACACAAGATATTTTTGAGGATGATATATTTGCTACGGAAGCAATTAAACCCTCTCAGAAAACCAGAGAGAAGG 3763
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 3764 AGAAAACATTGGAATCTAATTTATTTGATGATAACATTGATATCTTTGCTGACTTAACTGTAAAACCAAAAGAA 3837
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 3838 AAGTCCAAAAAGAAAGTGGAAGCCAAGTCTATATTTGATGATGATATGGATGACATCTTCTCCTCTGGTATCCA 3911
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 3912 GGCTAAGACAACCAAACCAAAAAGCCGATCTGCACAGGCCGCACCTGAACCAAGATTTGAACACAAGGTGTCCA 3985
Sbjct 2188 -------------------------------------------------------------------------- 2187
Query 3986 ACATCTTTGATGATCCCCTGAATGCCTTTGGAGGCCAG 4023
Sbjct 2188 -------------------------------------- 2187
