Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10232
- Subject:
- XR_384605.3
- Aligned Length:
- 1361
- Identities:
- 676
- Gaps:
- 583
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTGCGCATGCTTTGGCAGACGTGGCACCGGGAACTCGGAGGCGGGGAGCGGCTGTGAAGTGGCCGTAGCTGTT 74
Query 1 --------------------------------------------------------------ATGGCGCGGGC- 11
|||||||||||
Sbjct 75 GGCCGAGGTGGAGCTGGCAGGCGTGCGCGGGAGCCGGGTGCAGACGGCAGGAGGCGGCGGGGATGGCGCGGGCG 148
Query 12 CGGGCCGGCGTGGCTGCTGCTGGCAATCTGGGTGGTCCTGCCATCATGGCTGTCCTCTGCAAAGGTCTCCTCGC 85
.||| |||||||.|||||.||..|||||||||||||..|||||||||||||..||||||||||.||||
Sbjct 149 TGGG-------GGCTGCTACTGGCGATTGGGGTGGTCCTGCCGACATGGCTGTCCTCCACAAAGGTCTCTTCGC 215
Query 86 TCATTGAGAGAATCTCTGACCCCAAGGACTTGAAAAAACTGCTCAGAACCCGGAATAATGTACTGGTGCTTTAC 159
||||||||||||||||.|||||.|||||||||||.|||||.|||||.|||||.|||||.||.||||||||||||
Sbjct 216 TCATTGAGAGAATCTCCGACCCTAAGGACTTGAAGAAACTTCTCAGGACCCGCAATAACGTGCTGGTGCTTTAC 289
Query 160 TCCAAATCTGAGGTGGCAGCTGAAAATCATCTCAGGTTACTGTCCACAGTGGCCCAGGCGGTGAAAGGACAAGG 233
||..||||.|||||.||||||||||.||||||.|.|.|.||||||||.|||||||||||.||||||||.|||||
Sbjct 290 TCGGAATCCGAGGTAGCAGCTGAAAGTCATCTTAAGCTCCTGTCCACCGTGGCCCAGGCAGTGAAAGGCCAAGG 363
Query 234 GACCATCTGCTGGGTGGACTGTGGTGATGCAGAGAGTAGAAAATTGTGCAAGAAGATGAAAGTTGACCTGAGCC 307
.|||.||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 364 CACCGTCTGCTGGGTGGACTGCGGTGACGCAGAGAGTAGAAAATTGTGCAAGAAGATGAAAGTTGACCTCAGCC 437
Query 308 CGAAGGACAAAAAGGTTGAATTATTCCATTACCAGGATGGTGCATTTCATACTG-AATATAACCGAGCTGTGAC 380
|.||||||||||||.||||||||||||||||||||||.||.||.|||||.| || |.|||.|||||||||||||
Sbjct 438 CAAAGGACAAAAAGATTGAATTATTCCATTACCAGGACGGCGCCTTTCACA-TGCAGTATGACCGAGCTGTGAC 510
Query 381 ATTTAAGTCCATAGTGGCCTTTTTGAAGGATCCAAAAGGGCCCCCACTGTGGGAGGAAGATCCTGGAGCCAAAG 454
.||.||||||||||||||||||.||||.||.||.|||||.||||||||||||||.|||||||||||||||||||
Sbjct 511 GTTGAAGTCCATAGTGGCCTTTCTGAAAGACCCTAAAGGTCCCCCACTGTGGGAAGAAGATCCTGGAGCCAAAG 584
Query 455 ATGTTGTCCACCTTGACAGTGAAAAGGACTTCAGACGGCTCCTGAAGAAGGAAGAGAAGCCGCTCCTGATCATG 528
|||||||.|||.|.||||||||.||||||||||||||.||||||||||..|||||||||||.||.||.||.|||
Sbjct 585 ATGTTGTGCACATCGACAGTGAGAAGGACTTCAGACGACTCCTGAAGAGAGAAGAGAAGCCACTGCTCATGATG 658
Query 529 TTTTATGCCCCCTGGTGCAGCATGTGCAAGAGGATGATGCCGCATTTCCAGAAGGCTGCGACTCAGCTGCGAGG 602
||.|||||.|||||||||||||||||||||||.||.|||||.|||||||||||||||||.||.||..|||||||
Sbjct 659 TTCTATGCTCCCTGGTGCAGCATGTGCAAGAGAATCATGCCACATTTCCAGAAGGCTGCCACCCAAGTGCGAGG 732
Query 603 CCACGCCGTGCTGGCCGGGATGAATGTCTACTCCTCTGAATTTGAAAACATCAAGGAGGAGTACAGCGTGCGCG 676
||||...||.|||||.||||||||.||||||.|.||.||.||.||.|||||||||||.|||||||..||.||||
Sbjct 733 CCACATTGTCCTGGCTGGGATGAACGTCTACCCATCAGAGTTCGAGAACATCAAGGAAGAGTACAATGTCCGCG 806
Query 677 GCTTCCCCACCATCTGCTATTTTGAGAAAGGACGGTTCTTGTTCCAGTATGACAACTATGGGTCCACAGCTGAG 750
|||.|||.||||||||||||||.|||||.||.|||||..||||||.||||||.||||||||||||||.||.|||
Sbjct 807 GCTACCCTACCATCTGCTATTTCGAGAAGGGGCGGTTTCTGTTCCCGTATGAGAACTATGGGTCCACGGCCGAG 880
Query 751 GACATTGTGGAGTGGCTGAAGAAGGTGTGGCCACTG-------------------------------------- 786
|||||.|||||||||.||||||||||||||.||.||
Sbjct 881 GACATCGTGGAGTGGTTGAAGAAGGTGTGGACATTGTAAGAAAATGAAGCCAGAGTTTGAGAGTGCTGCTGAAG 954
Query 787 -------------------------------------------------------------------------- 786
Sbjct 955 TCCTCCACGGAGATGCTGAGCTGTCGATGCCACCGTCAACGAGGCCCTGGCAGGAAGATTTCACATCTCAGCGT 1028
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1029 TTCCTACCCTGAAGTATTTTAAGAATGGCGAGCAGCAAGCGGTGCCTGCGCTCAGAACAAAGAAGAAGTTTATT 1102
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1103 GAGTGGATGCAGAACCCTGAGGCTCCCCCACCTCCAGAGCCCACGTGGGAAGAACAGCAGACAAGCGTGCTACA 1176
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1177 TCTGGTGGGGGATAACTTCCGGGATACCCTGAAGAAGAAGAAACACACCTTGGTCATGTTCTATGCCCCTTGGT 1250
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1251 GCCCACACTGTAAGAAGGTCATCCCCCACTTCACTGCCACAGCCGATGCCTTCAAAGAGGACCGCAAGATTGCC 1324
Query 787 ----------------------------- 786
Sbjct 1325 TGTGCTGCTGTAGACTGTGTCAAGGACAA 1353